Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.15□□□□□ -2.59
Trafd1Q3UDK1 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.16□□□□□ -2.6
Trafd1Q3UDK1 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.16□□□□□ -2.6
Trafd1Q3UDK1 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.17□□□□□ -2.6
Trafd1Q3UDK1 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.17□□□□□ -2.6
Trafd1Q3UDK1 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.17□□□□□ -2.6
Trafd1Q3UDK1 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.17□□□□□ -2.6
Trafd1Q3UDK1 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.17□□□□□ -2.6
Trafd1Q3UDK1 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.18□□□□□ -2.6
Trafd1Q3UDK1 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.18□□□□□ -2.6
Trafd1Q3UDK1 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.19□□□□□ -2.6
Trafd1Q3UDK1 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.2□□□□□ -2.6
Trafd1Q3UDK1 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.21□□□□□ -2.6
Trafd1Q3UDK1 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.21□□□□□ -2.6
Trafd1Q3UDK1 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.22□□□□□ -2.6
Trafd1Q3UDK1 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.22□□□□□ -2.6
Trafd1Q3UDK1 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.23□□□□□ -2.61
Trafd1Q3UDK1 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.23□□□□□ -2.61
Trafd1Q3UDK1 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.24□□□□□ -2.61
Trafd1Q3UDK1 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.25□□□□□ -2.61
Trafd1Q3UDK1 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.25□□□□□ -2.61
Trafd1Q3UDK1 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.25□□□□□ -2.61
Trafd1Q3UDK1 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.25□□□□□ -2.61
Trafd1Q3UDK1 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.26□□□□□ -2.61
Trafd1Q3UDK1 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.27□□□□□ -2.61
Trafd1Q3UDK1 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.27□□□□□ -2.61
Trafd1Q3UDK1 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.27□□□□□ -2.61
Trafd1Q3UDK1 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.27□□□□□ -2.61
Trafd1Q3UDK1 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.28□□□□□ -2.61
Trafd1Q3UDK1 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.29□□□□□ -2.62
Trafd1Q3UDK1 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.29□□□□□ -2.62
Trafd1Q3UDK1 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.3□□□□□ -2.62
Trafd1Q3UDK1 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.3□□□□□ -2.62
Trafd1Q3UDK1 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.31□□□□□ -2.62
Trafd1Q3UDK1 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.32□□□□□ -2.62
Trafd1Q3UDK1 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.32□□□□□ -2.62
Trafd1Q3UDK1 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.33□□□□□ -2.62
Trafd1Q3UDK1 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.35□□□□□ -2.63
Trafd1Q3UDK1 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.36□□□□□ -2.63
Trafd1Q3UDK1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
Trafd1Q3UDK1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
Trafd1Q3UDK1 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.36□□□□□ -2.63
Trafd1Q3UDK1 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.37□□□□□ -2.63
Trafd1Q3UDK1 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.37□□□□□ -2.63
Trafd1Q3UDK1 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.37□□□□□ -2.63
Trafd1Q3UDK1 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.37□□□□□ -2.63
Trafd1Q3UDK1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Trafd1Q3UDK1 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.38□□□□□ -2.63
Trafd1Q3UDK1 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.38□□□□□ -2.63
Trafd1Q3UDK1 Mir122-201ENSMUST00000083468 66 ntBASIC-1.38□□□□□ -2.63
Trafd1Q3UDK1 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.39□□□□□ -2.63
Trafd1Q3UDK1 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.4□□□□□ -2.63
Trafd1Q3UDK1 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.4□□□□□ -2.63
Trafd1Q3UDK1 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.41□□□□□ -2.64
Trafd1Q3UDK1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Trafd1Q3UDK1 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.42□□□□□ -2.64
Trafd1Q3UDK1 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.43□□□□□ -2.64
Trafd1Q3UDK1 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.45□□□□□ -2.64
Trafd1Q3UDK1 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.45□□□□□ -2.64
Trafd1Q3UDK1 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.46□□□□□ -2.64
Trafd1Q3UDK1 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.46□□□□□ -2.64
Trafd1Q3UDK1 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.47□□□□□ -2.64
Trafd1Q3UDK1 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.47□□□□□ -2.64
Trafd1Q3UDK1 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.47□□□□□ -2.64
Trafd1Q3UDK1 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.48□□□□□ -2.65
Trafd1Q3UDK1 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.48□□□□□ -2.65
Trafd1Q3UDK1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.48□□□□□ -2.65
Trafd1Q3UDK1 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.49□□□□□ -2.65
Trafd1Q3UDK1 Mir367-201ENSMUST00000083479 75 ntBASIC-1.49□□□□□ -2.65
Trafd1Q3UDK1 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.49□□□□□ -2.65
Trafd1Q3UDK1 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.5□□□□□ -2.65
Trafd1Q3UDK1 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.52□□□□□ -2.65
Trafd1Q3UDK1 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.52□□□□□ -2.65
Trafd1Q3UDK1 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.55□□□□□ -2.66
Trafd1Q3UDK1 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.55□□□□□ -2.66
Trafd1Q3UDK1 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.56□□□□□ -2.66
Trafd1Q3UDK1 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.57□□□□□ -2.66
Trafd1Q3UDK1 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.57□□□□□ -2.66
Trafd1Q3UDK1 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.57□□□□□ -2.66
Trafd1Q3UDK1 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.58□□□□□ -2.66
Trafd1Q3UDK1 Mir379-201ENSMUST00000083564 66 ntBASIC-1.58□□□□□ -2.66
Trafd1Q3UDK1 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.6□□□□□ -2.67
Trafd1Q3UDK1 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.61□□□□□ -2.67
Trafd1Q3UDK1 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.61□□□□□ -2.67
Trafd1Q3UDK1 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.61□□□□□ -2.67
Trafd1Q3UDK1 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms