Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Mir367-201ENSMUST00000083479 75 ntBASIC0,23□□□□□ -2,37
Rnf40Q3U319 Gm44303-201ENSMUST00000196348 83 ntBASIC0,22□□□□□ -2,37
Rnf40Q3U319 Mir3089-201ENSMUST00000175350 84 ntBASIC0,19□□□□□ -2,38
Rnf40Q3U319 AL845349.1-201ENSMUST00000213794 78 ntBASIC0,18□□□□□ -2,38
Rnf40Q3U319 Gm24455-201ENSMUST00000083348 131 ntBASIC0,18□□□□□ -2,38
Rnf40Q3U319 Gm24296-201ENSMUST00000158297 106 ntBASIC0,16□□□□□ -2,38
Rnf40Q3U319 Gm44589-201ENSMUST00000207025 115 ntBASIC0,16□□□□□ -2,38
Rnf40Q3U319 Gm22368-201ENSMUST00000102416 109 ntBASIC0,15□□□□□ -2,39
Rnf40Q3U319 Mir382-201ENSMUST00000083494 76 ntBASIC0,13□□□□□ -2,39
Rnf40Q3U319 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0,12□□□□□ -2,39
Rnf40Q3U319 Gm25032-201ENSMUST00000175411 84 ntBASIC0,12□□□□□ -2,39
Rnf40Q3U319 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0,12□□□□□ -2,39
Rnf40Q3U319 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0,12□□□□□ -2,39
Rnf40Q3U319 Mir28c-201ENSMUST00000200096 75 ntBASIC0,12□□□□□ -2,39
Rnf40Q3U319 Mir141-201ENSMUST00000083540 72 ntBASIC0,12□□□□□ -2,39
Rnf40Q3U319 AC154832.1-201ENSMUST00000228928 141 ntBASIC0,1□□□□□ -2,39
Rnf40Q3U319 Gm22962-201ENSMUST00000157962 73 ntBASIC0,09□□□□□ -2,4
Rnf40Q3U319 Gm24793-201ENSMUST00000104289 132 ntBASIC0,07□□□□□ -2,4
Rnf40Q3U319 Gm24387-201ENSMUST00000104625 90 ntBASIC0,07□□□□□ -2,4
Rnf40Q3U319 Gm22077-201ENSMUST00000157594 93 ntBASIC0,07□□□□□ -2,4
Rnf40Q3U319 Gm23749-201ENSMUST00000104223 131 ntBASIC0,06□□□□□ -2,4
Rnf40Q3U319 Gm24903-201ENSMUST00000158131 126 ntBASIC0,06□□□□□ -2,4
Rnf40Q3U319 Mir1839-201ENSMUST00000175366 127 ntBASIC0,06□□□□□ -2,4
Rnf40Q3U319 Mir7038-201ENSMUST00000184833 71 ntBASIC0,06□□□□□ -2,4
Rnf40Q3U319 Mir6904-201ENSMUST00000183443 67 ntBASIC0,05□□□□□ -2,4
Rnf40Q3U319 Mir7681-201ENSMUST00000184834 72 ntBASIC0,05□□□□□ -2,4
Rnf40Q3U319 Gm22813-201ENSMUST00000199948 123 ntBASIC0,04□□□□□ -2,4
Rnf40Q3U319 Mir672-201ENSMUST00000102331 100 ntBASIC0,03□□□□□ -2,4
Rnf40Q3U319 Gm22324-201ENSMUST00000158903 114 ntBASIC0,03□□□□□ -2,4
Rnf40Q3U319 Gm25703-201ENSMUST00000083123 151 ntBASIC0,03□□□□□ -2,4
Rnf40Q3U319 Gm25225-201ENSMUST00000158197 102 ntBASIC0,02□□□□□ -2,41
Rnf40Q3U319 Gm25472-201ENSMUST00000175454 78 ntBASIC0□□□□□ -2,41
Rnf40Q3U319 Gm24502-201ENSMUST00000158453 105 ntBASIC-0,01□□□□□ -2,41
Rnf40Q3U319 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0,02□□□□□ -2,41
Rnf40Q3U319 Gm24256-201ENSMUST00000083696 84 ntBASIC-0,02□□□□□ -2,41
Rnf40Q3U319 Gm24646-201ENSMUST00000157109 99 ntBASIC-0,03□□□□□ -2,41
Rnf40Q3U319 Gm26395-201ENSMUST00000104094 132 ntBASIC-0,04□□□□□ -2,42
Rnf40Q3U319 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0,04□□□□□ -2,42
Rnf40Q3U319 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0,04□□□□□ -2,42
Rnf40Q3U319 Mir6957-201ENSMUST00000183708 64 ntBASIC-0,05□□□□□ -2,42
Rnf40Q3U319 Gm24381-201ENSMUST00000122697 104 ntBASIC-0,06□□□□□ -2,42
Rnf40Q3U319 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0,06□□□□□ -2,42
Rnf40Q3U319 Mir192-201ENSMUST00000083589 89 ntBASIC-0,06□□□□□ -2,42
Rnf40Q3U319 Gm23125-201ENSMUST00000157651 106 ntBASIC-0,07□□□□□ -2,42
Rnf40Q3U319 Gm25143-201ENSMUST00000082696 109 ntBASIC-0,07□□□□□ -2,42
Rnf40Q3U319 Gm26472-201ENSMUST00000116760 83 ntBASIC-0,08□□□□□ -2,42
Rnf40Q3U319 Gm19248-201ENSMUST00000209404 110 ntBASIC-0,08□□□□□ -2,42
Rnf40Q3U319 Gm24673-201ENSMUST00000116948 124 ntBASIC-0,09□□□□□ -2,42
Rnf40Q3U319 Gm23108-201ENSMUST00000178295 124 ntBASIC-0,09□□□□□ -2,42
Rnf40Q3U319 Mir191-201ENSMUST00000196210 74 ntBASIC-0,09□□□□□ -2,42
Rnf40Q3U319 Gm22942-201ENSMUST00000158563 124 ntBASIC-0,1□□□□□ -2,43
Rnf40Q3U319 Gm26262-201ENSMUST00000158024 127 ntBASIC-0,11□□□□□ -2,43
Rnf40Q3U319 Gm24003-201ENSMUST00000158455 100 ntBASIC-0,11□□□□□ -2,43
Rnf40Q3U319 Gm25712-201ENSMUST00000158634 93 ntBASIC-0,11□□□□□ -2,43
Rnf40Q3U319 Gm45374-201ENSMUST00000211388 136 ntBASIC-0,11□□□□□ -2,43
Rnf40Q3U319 Snord16a-201ENSMUST00000083895 99 ntBASIC-0,11□□□□□ -2,43
Rnf40Q3U319 Gm25596-201ENSMUST00000178368 107 ntBASIC-0,12□□□□□ -2,43
Rnf40Q3U319 Mir1969-201ENSMUST00000157623 94 ntBASIC-0,13□□□□□ -2,43
Rnf40Q3U319 Gm25772-201ENSMUST00000158574 56 ntBASIC-0,14□□□□□ -2,43
Rnf40Q3U319 Snora16a-201ENSMUST00000083163 136 ntBASIC-0,14□□□□□ -2,43
Rnf40Q3U319 Mir6915-201ENSMUST00000198839 69 ntBASIC-0,15□□□□□ -2,43
Rnf40Q3U319 Mir214-201ENSMUST00000083582 110 ntBASIC-0,15□□□□□ -2,43
Rnf40Q3U319 Gm23308-201ENSMUST00000179475 107 ntBASIC-0,16□□□□□ -2,44
Rnf40Q3U319 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0,16□□□□□ -2,44
Rnf40Q3U319 Gm22757-201ENSMUST00000102279 96 ntBASIC-0,17□□□□□ -2,44
Rnf40Q3U319 Gm25429-201ENSMUST00000157607 132 ntBASIC-0,18□□□□□ -2,44
Rnf40Q3U319 Gm23918-201ENSMUST00000175253 106 ntBASIC-0,18□□□□□ -2,44
Rnf40Q3U319 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0,19□□□□□ -2,44
Rnf40Q3U319 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0,19□□□□□ -2,44
Rnf40Q3U319 Gm25108-201ENSMUST00000122473 78 ntBASIC-0,2□□□□□ -2,44
Rnf40Q3U319 Mir539-201ENSMUST00000102109 74 ntBASIC-0,21□□□□□ -2,44
Rnf40Q3U319 Gm23904-201ENSMUST00000157567 124 ntBASIC-0,22□□□□□ -2,44
Rnf40Q3U319 Snora16a-202ENSMUST00000196061 137 ntBASIC-0,22□□□□□ -2,44
Rnf40Q3U319 Gm45688-201ENSMUST00000210002 101 ntBASIC-0,22□□□□□ -2,44
Rnf40Q3U319 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0,22□□□□□ -2,44
Rnf40Q3U319 Mir96-201ENSMUST00000083652 106 ntBASIC-0,23□□□□□ -2,45
Rnf40Q3U319 Gm22013-201ENSMUST00000158788 103 ntBASIC-0,25□□□□□ -2,45
Rnf40Q3U319 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0,25□□□□□ -2,45
Rnf40Q3U319 Mir145a-201ENSMUST00000083658 70 ntBASIC-0,25□□□□□ -2,45
Rnf40Q3U319 Gm25149-201ENSMUST00000157119 82 ntBASIC-0,26□□□□□ -2,45
Rnf40Q3U319 Mir378c-201ENSMUST00000184478 99 ntBASIC-0,26□□□□□ -2,45
Rnf40Q3U319 Mir677-202ENSMUST00000197076 78 ntBASIC-0,26□□□□□ -2,45
Rnf40Q3U319 Gm24587-201ENSMUST00000116697 89 ntBASIC-0,27□□□□□ -2,45
Rnf40Q3U319 Gm24775-201ENSMUST00000157377 99 ntBASIC-0,28□□□□□ -2,45
Rnf40Q3U319 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0,3□□□□□ -2,46
Rnf40Q3U319 Gm24887-201ENSMUST00000104386 108 ntBASIC-0,3□□□□□ -2,46
Rnf40Q3U319 Snord49b-201ENSMUST00000082503 72 ntBASIC-0,3□□□□□ -2,46
Rnf40Q3U319 Gm23690-201ENSMUST00000083036 94 ntBASIC-0,3□□□□□ -2,46
Rnf40Q3U319 Gm23166-201ENSMUST00000157164 101 ntBASIC-0,31□□□□□ -2,46
Rnf40Q3U319 Gm22607-201ENSMUST00000158291 105 ntBASIC-0,31□□□□□ -2,46
Rnf40Q3U319 Gm27735-201ENSMUST00000185085 76 ntBASIC-0,31□□□□□ -2,46
Rnf40Q3U319 Gm24714-201ENSMUST00000102382 101 ntBASIC-0,32□□□□□ -2,46
Rnf40Q3U319 Gm25338-201ENSMUST00000116849 120 ntBASIC-0,33□□□□□ -2,46
Rnf40Q3U319 Gm23543-201ENSMUST00000158207 106 ntBASIC-0,33□□□□□ -2,46
Rnf40Q3U319 Gm23314-201ENSMUST00000157218 107 ntBASIC-0,34□□□□□ -2,46
Rnf40Q3U319 Gm24051-201ENSMUST00000158622 75 ntBASIC-0,34□□□□□ -2,46
Rnf40Q3U319 Gm22489-201ENSMUST00000116813 62 ntBASIC-0,35□□□□□ -2,47
Rnf40Q3U319 Gm25493-201ENSMUST00000157375 103 ntBASIC-0,35□□□□□ -2,47
Rnf40Q3U319 Gm22313-201ENSMUST00000158008 129 ntBASIC-0,36□□□□□ -2,47
Rnf40Q3U319 Gm24823-201ENSMUST00000175092 91 ntBASIC-0,38□□□□□ -2,47
Retrieved 100 of 76,532 protein–RNA pairs in 9,6 ms