Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.4□□□□□ -2.47
Ddb1Q3U1J4 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.4□□□□□ -2.47
Ddb1Q3U1J4 Gm23961-201ENSMUST00000104685 97 ntBASIC-0.41□□□□□ -2.48
Ddb1Q3U1J4 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.43□□□□□ -2.48
Ddb1Q3U1J4 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.43□□□□□ -2.48
Ddb1Q3U1J4 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.45□□□□□ -2.48
Ddb1Q3U1J4 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.45□□□□□ -2.48
Ddb1Q3U1J4 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.46□□□□□ -2.48
Ddb1Q3U1J4 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.47□□□□□ -2.48
Ddb1Q3U1J4 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.49□□□□□ -2.49
Ddb1Q3U1J4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.49□□□□□ -2.49
Ddb1Q3U1J4 Gm25524-201ENSMUST00000101821 107 ntBASIC-0.5□□□□□ -2.49
Ddb1Q3U1J4 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.5□□□□□ -2.49
Ddb1Q3U1J4 Mir136-201ENSMUST00000199494 62 ntBASIC-0.5□□□□□ -2.49
Ddb1Q3U1J4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.51□□□□□ -2.49
Ddb1Q3U1J4 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.52□□□□□ -2.49
Ddb1Q3U1J4 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.52□□□□□ -2.49
Ddb1Q3U1J4 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Ddb1Q3U1J4 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.54□□□□□ -2.5
Ddb1Q3U1J4 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.54□□□□□ -2.5
Ddb1Q3U1J4 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.54□□□□□ -2.5
Ddb1Q3U1J4 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.54□□□□□ -2.5
Ddb1Q3U1J4 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.55□□□□□ -2.5
Ddb1Q3U1J4 Mir677-202ENSMUST00000197076 78 ntBASIC-0.55□□□□□ -2.5
Ddb1Q3U1J4 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.55□□□□□ -2.5
Ddb1Q3U1J4 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.55□□□□□ -2.5
Ddb1Q3U1J4 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.55□□□□□ -2.5
Ddb1Q3U1J4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.56□□□□□ -2.5
Ddb1Q3U1J4 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.56□□□□□ -2.5
Ddb1Q3U1J4 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.59□□□□□ -2.5
Ddb1Q3U1J4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.59□□□□□ -2.5
Ddb1Q3U1J4 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.59□□□□□ -2.5
Ddb1Q3U1J4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.59□□□□□ -2.5
Ddb1Q3U1J4 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.6□□□□□ -2.51
Ddb1Q3U1J4 Mir574-201ENSMUST00000103854 78 ntBASIC-0.6□□□□□ -2.51
Ddb1Q3U1J4 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.62□□□□□ -2.51
Ddb1Q3U1J4 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.63□□□□□ -2.51
Ddb1Q3U1J4 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.64□□□□□ -2.51
Ddb1Q3U1J4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.65□□□□□ -2.51
Ddb1Q3U1J4 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.66□□□□□ -2.52
Ddb1Q3U1J4 Mir1955-201ENSMUST00000158014 98 ntBASIC-0.66□□□□□ -2.52
Ddb1Q3U1J4 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.66□□□□□ -2.52
Ddb1Q3U1J4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.66□□□□□ -2.52
Ddb1Q3U1J4 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.66□□□□□ -2.52
Ddb1Q3U1J4 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.67□□□□□ -2.52
Ddb1Q3U1J4 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.68□□□□□ -2.52
Ddb1Q3U1J4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.68□□□□□ -2.52
Ddb1Q3U1J4 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.69□□□□□ -2.52
Ddb1Q3U1J4 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.7□□□□□ -2.52
Ddb1Q3U1J4 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.71□□□□□ -2.52
Ddb1Q3U1J4 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.71□□□□□ -2.52
Ddb1Q3U1J4 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.71□□□□□ -2.52
Ddb1Q3U1J4 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.71□□□□□ -2.52
Ddb1Q3U1J4 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.72□□□□□ -2.52
Ddb1Q3U1J4 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.73□□□□□ -2.53
Ddb1Q3U1J4 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.73□□□□□ -2.53
Ddb1Q3U1J4 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.73□□□□□ -2.53
Ddb1Q3U1J4 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.73□□□□□ -2.53
Ddb1Q3U1J4 Gm26259-201ENSMUST00000104778 97 ntBASIC-0.74□□□□□ -2.53
Ddb1Q3U1J4 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.74□□□□□ -2.53
Ddb1Q3U1J4 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.74□□□□□ -2.53
Ddb1Q3U1J4 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.74□□□□□ -2.53
Ddb1Q3U1J4 Mir295-201ENSMUST00000104694 69 ntBASIC-0.75□□□□□ -2.53
Ddb1Q3U1J4 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.75□□□□□ -2.53
Ddb1Q3U1J4 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.76□□□□□ -2.53
Ddb1Q3U1J4 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.78□□□□□ -2.53
Ddb1Q3U1J4 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.78□□□□□ -2.53
Ddb1Q3U1J4 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.78□□□□□ -2.53
Ddb1Q3U1J4 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.78□□□□□ -2.53
Ddb1Q3U1J4 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.79□□□□□ -2.54
Ddb1Q3U1J4 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.79□□□□□ -2.54
Ddb1Q3U1J4 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.8□□□□□ -2.54
Ddb1Q3U1J4 Gm22127-201ENSMUST00000083239 106 ntBASIC-0.81□□□□□ -2.54
Ddb1Q3U1J4 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.82□□□□□ -2.54
Ddb1Q3U1J4 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.82□□□□□ -2.54
Ddb1Q3U1J4 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.83□□□□□ -2.54
Ddb1Q3U1J4 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.83□□□□□ -2.54
Ddb1Q3U1J4 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.83□□□□□ -2.54
Ddb1Q3U1J4 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.83□□□□□ -2.54
Ddb1Q3U1J4 Snord123-201ENSMUST00000158692 71 ntBASIC-0.85□□□□□ -2.55
Ddb1Q3U1J4 Mir367-201ENSMUST00000083479 75 ntBASIC-0.85□□□□□ -2.55
Ddb1Q3U1J4 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.86□□□□□ -2.55
Ddb1Q3U1J4 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.86□□□□□ -2.55
Ddb1Q3U1J4 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.87□□□□□ -2.55
Ddb1Q3U1J4 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.89□□□□□ -2.55
Ddb1Q3U1J4 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.89□□□□□ -2.55
Ddb1Q3U1J4 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.89□□□□□ -2.55
Ddb1Q3U1J4 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.91□□□□□ -2.56
Ddb1Q3U1J4 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.92□□□□□ -2.56
Ddb1Q3U1J4 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.92□□□□□ -2.56
Ddb1Q3U1J4 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.92□□□□□ -2.56
Ddb1Q3U1J4 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.92□□□□□ -2.56
Ddb1Q3U1J4 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.92□□□□□ -2.56
Ddb1Q3U1J4 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.93□□□□□ -2.56
Ddb1Q3U1J4 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms