Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.91□□□□□ -2.56
Ssrp1Q08943 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.91□□□□□ -2.56
Ssrp1Q08943 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.92□□□□□ -2.56
Ssrp1Q08943 Gm22069-201ENSMUST00000179911 107 ntBASIC-0.92□□□□□ -2.56
Ssrp1Q08943 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.92□□□□□ -2.56
Ssrp1Q08943 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.93□□□□□ -2.56
Ssrp1Q08943 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.93□□□□□ -2.56
Ssrp1Q08943 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.94□□□□□ -2.56
Ssrp1Q08943 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.94□□□□□ -2.56
Ssrp1Q08943 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.95□□□□□ -2.56
Ssrp1Q08943 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.95□□□□□ -2.56
Ssrp1Q08943 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.95□□□□□ -2.56
Ssrp1Q08943 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.96□□□□□ -2.56
Ssrp1Q08943 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.97□□□□□ -2.56
Ssrp1Q08943 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.97□□□□□ -2.56
Ssrp1Q08943 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.97□□□□□ -2.56
Ssrp1Q08943 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.98□□□□□ -2.57
Ssrp1Q08943 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.99□□□□□ -2.57
Ssrp1Q08943 Gm23573-201ENSMUST00000104408 107 ntBASIC-1□□□□□ -2.57
Ssrp1Q08943 Mir6957-201ENSMUST00000183708 64 ntBASIC-1□□□□□ -2.57
Ssrp1Q08943 Gm24259-201ENSMUST00000083740 107 ntBASIC-1□□□□□ -2.57
Ssrp1Q08943 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.02□□□□□ -2.57
Ssrp1Q08943 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.02□□□□□ -2.57
Ssrp1Q08943 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.02□□□□□ -2.57
Ssrp1Q08943 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.03□□□□□ -2.57
Ssrp1Q08943 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.03□□□□□ -2.57
Ssrp1Q08943 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.03□□□□□ -2.57
Ssrp1Q08943 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.03□□□□□ -2.57
Ssrp1Q08943 Gm22943-201ENSMUST00000158564 76 ntBASIC-1.04□□□□□ -2.58
Ssrp1Q08943 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.05□□□□□ -2.58
Ssrp1Q08943 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.06□□□□□ -2.58
Ssrp1Q08943 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.06□□□□□ -2.58
Ssrp1Q08943 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.07□□□□□ -2.58
Ssrp1Q08943 Gm22540-201ENSMUST00000158168 117 ntBASIC-1.07□□□□□ -2.58
Ssrp1Q08943 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.07□□□□□ -2.58
Ssrp1Q08943 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.07□□□□□ -2.58
Ssrp1Q08943 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.07□□□□□ -2.58
Ssrp1Q08943 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.08□□□□□ -2.58
Ssrp1Q08943 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.09□□□□□ -2.58
Ssrp1Q08943 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.1□□□□□ -2.59
Ssrp1Q08943 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.11□□□□□ -2.59
Ssrp1Q08943 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.11□□□□□ -2.59
Ssrp1Q08943 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.12□□□□□ -2.59
Ssrp1Q08943 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.12□□□□□ -2.59
Ssrp1Q08943 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.12□□□□□ -2.59
Ssrp1Q08943 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.13□□□□□ -2.59
Ssrp1Q08943 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.13□□□□□ -2.59
Ssrp1Q08943 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.13□□□□□ -2.59
Ssrp1Q08943 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.14□□□□□ -2.59
Ssrp1Q08943 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.14□□□□□ -2.59
Ssrp1Q08943 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Ssrp1Q08943 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.16□□□□□ -2.6
Ssrp1Q08943 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.17□□□□□ -2.6
Ssrp1Q08943 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.17□□□□□ -2.6
Ssrp1Q08943 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.17□□□□□ -2.6
Ssrp1Q08943 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.19□□□□□ -2.6
Ssrp1Q08943 Snord123-201ENSMUST00000158692 71 ntBASIC-1.19□□□□□ -2.6
Ssrp1Q08943 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.19□□□□□ -2.6
Ssrp1Q08943 Snord8-201ENSMUST00000175303 110 ntBASIC-1.19□□□□□ -2.6
Ssrp1Q08943 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.2□□□□□ -2.6
Ssrp1Q08943 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.2□□□□□ -2.6
Ssrp1Q08943 Mir543-201ENSMUST00000102286 76 ntBASIC-1.22□□□□□ -2.6
Ssrp1Q08943 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.22□□□□□ -2.6
Ssrp1Q08943 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.23□□□□□ -2.61
Ssrp1Q08943 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.23□□□□□ -2.61
Ssrp1Q08943 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.24□□□□□ -2.61
Ssrp1Q08943 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.24□□□□□ -2.61
Ssrp1Q08943 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.24□□□□□ -2.61
Ssrp1Q08943 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.24□□□□□ -2.61
Ssrp1Q08943 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.24□□□□□ -2.61
Ssrp1Q08943 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.27□□□□□ -2.61
Ssrp1Q08943 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.27□□□□□ -2.61
Ssrp1Q08943 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.27□□□□□ -2.61
Ssrp1Q08943 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.29□□□□□ -2.62
Ssrp1Q08943 Gm24396-201ENSMUST00000116905 93 ntBASIC-1.32□□□□□ -2.62
Ssrp1Q08943 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.33□□□□□ -2.62
Ssrp1Q08943 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.35□□□□□ -2.63
Ssrp1Q08943 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.35□□□□□ -2.63
Ssrp1Q08943 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.36□□□□□ -2.63
Ssrp1Q08943 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.36□□□□□ -2.63
Ssrp1Q08943 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.41□□□□□ -2.64
Ssrp1Q08943 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.42□□□□□ -2.64
Ssrp1Q08943 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.42□□□□□ -2.64
Ssrp1Q08943 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.43□□□□□ -2.64
Ssrp1Q08943 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.46□□□□□ -2.64
Ssrp1Q08943 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
Ssrp1Q08943 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
Ssrp1Q08943 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.46□□□□□ -2.64
Ssrp1Q08943 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.48□□□□□ -2.65
Ssrp1Q08943 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.48□□□□□ -2.65
Ssrp1Q08943 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.5□□□□□ -2.65
Ssrp1Q08943 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.51□□□□□ -2.65
Ssrp1Q08943 Mir122-201ENSMUST00000083468 66 ntBASIC-1.52□□□□□ -2.65
Ssrp1Q08943 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.53□□□□□ -2.65
Ssrp1Q08943 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms