Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.86□□□□□ -2.55
SmoP56726 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.86□□□□□ -2.55
SmoP56726 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
SmoP56726 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
SmoP56726 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.86□□□□□ -2.55
SmoP56726 Snord57-201ENSMUST00000083338 72 ntBASIC-0.86□□□□□ -2.55
SmoP56726 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.88□□□□□ -2.55
SmoP56726 Mir136-201ENSMUST00000199494 62 ntBASIC-0.88□□□□□ -2.55
SmoP56726 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.88□□□□□ -2.55
SmoP56726 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.9□□□□□ -2.55
SmoP56726 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.9□□□□□ -2.55
SmoP56726 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.91□□□□□ -2.56
SmoP56726 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.91□□□□□ -2.56
SmoP56726 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.91□□□□□ -2.56
SmoP56726 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.91□□□□□ -2.56
SmoP56726 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.92□□□□□ -2.56
SmoP56726 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.93□□□□□ -2.56
SmoP56726 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.93□□□□□ -2.56
SmoP56726 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.94□□□□□ -2.56
SmoP56726 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.95□□□□□ -2.56
SmoP56726 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.95□□□□□ -2.56
SmoP56726 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.96□□□□□ -2.56
SmoP56726 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.96□□□□□ -2.56
SmoP56726 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.97□□□□□ -2.56
SmoP56726 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.97□□□□□ -2.56
SmoP56726 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.97□□□□□ -2.56
SmoP56726 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.97□□□□□ -2.56
SmoP56726 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.97□□□□□ -2.56
SmoP56726 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.98□□□□□ -2.57
SmoP56726 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.99□□□□□ -2.57
SmoP56726 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.99□□□□□ -2.57
SmoP56726 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.99□□□□□ -2.57
SmoP56726 Gm25087-201ENSMUST00000101992 78 ntBASIC-1□□□□□ -2.57
SmoP56726 Gm24331-201ENSMUST00000175099 67 ntBASIC-1□□□□□ -2.57
SmoP56726 Gm23801-201ENSMUST00000175561 67 ntBASIC-1□□□□□ -2.57
SmoP56726 Gm24485-201ENSMUST00000178283 67 ntBASIC-1□□□□□ -2.57
SmoP56726 Gm26467-201ENSMUST00000097257 78 ntBASIC-1□□□□□ -2.57
SmoP56726 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.03□□□□□ -2.57
SmoP56726 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.04□□□□□ -2.58
SmoP56726 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.05□□□□□ -2.58
SmoP56726 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.06□□□□□ -2.58
SmoP56726 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.06□□□□□ -2.58
SmoP56726 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.06□□□□□ -2.58
SmoP56726 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.07□□□□□ -2.58
SmoP56726 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.07□□□□□ -2.58
SmoP56726 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.07□□□□□ -2.58
SmoP56726 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.08□□□□□ -2.58
SmoP56726 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.09□□□□□ -2.58
SmoP56726 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.09□□□□□ -2.58
SmoP56726 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.09□□□□□ -2.58
SmoP56726 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.1□□□□□ -2.59
SmoP56726 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.11□□□□□ -2.59
SmoP56726 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.11□□□□□ -2.59
SmoP56726 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.11□□□□□ -2.59
SmoP56726 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.11□□□□□ -2.59
SmoP56726 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.11□□□□□ -2.59
SmoP56726 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.12□□□□□ -2.59
SmoP56726 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.12□□□□□ -2.59
SmoP56726 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.13□□□□□ -2.59
SmoP56726 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.13□□□□□ -2.59
SmoP56726 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.13□□□□□ -2.59
SmoP56726 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.14□□□□□ -2.59
SmoP56726 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
SmoP56726 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
SmoP56726 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.15□□□□□ -2.59
SmoP56726 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.17□□□□□ -2.6
SmoP56726 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.17□□□□□ -2.6
SmoP56726 Mir335-201ENSMUST00000083567 98 ntBASIC-1.17□□□□□ -2.6
SmoP56726 Mir543-201ENSMUST00000102286 76 ntBASIC-1.18□□□□□ -2.6
SmoP56726 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.18□□□□□ -2.6
SmoP56726 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.19□□□□□ -2.6
SmoP56726 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.2□□□□□ -2.6
SmoP56726 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.21□□□□□ -2.6
SmoP56726 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.22□□□□□ -2.6
SmoP56726 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.22□□□□□ -2.6
SmoP56726 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.22□□□□□ -2.6
SmoP56726 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.22□□□□□ -2.6
SmoP56726 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.23□□□□□ -2.61
SmoP56726 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.23□□□□□ -2.61
SmoP56726 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.25□□□□□ -2.61
SmoP56726 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.25□□□□□ -2.61
SmoP56726 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.25□□□□□ -2.61
SmoP56726 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.26□□□□□ -2.61
SmoP56726 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.26□□□□□ -2.61
SmoP56726 Snord123-201ENSMUST00000158692 71 ntBASIC-1.26□□□□□ -2.61
SmoP56726 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.26□□□□□ -2.61
SmoP56726 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.27□□□□□ -2.61
SmoP56726 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.27□□□□□ -2.61
SmoP56726 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.29□□□□□ -2.62
SmoP56726 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.29□□□□□ -2.62
SmoP56726 Mir351-201ENSMUST00000083569 99 ntBASIC-1.29□□□□□ -2.62
SmoP56726 Gm22033-201ENSMUST00000116947 90 ntBASIC-1.3□□□□□ -2.62
SmoP56726 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.32□□□□□ -2.62
SmoP56726 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.32□□□□□ -2.62
SmoP56726 Mir122-201ENSMUST00000083468 66 ntBASIC-1.32□□□□□ -2.62
SmoP56726 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.34□□□□□ -2.62
SmoP56726 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.34□□□□□ -2.62
SmoP56726 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.34□□□□□ -2.62
SmoP56726 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.34□□□□□ -2.62
SmoP56726 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms