Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.42□□□□□ -2.48
Rfx1P48377 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.43□□□□□ -2.48
Rfx1P48377 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.44□□□□□ -2.48
Rfx1P48377 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.44□□□□□ -2.48
Rfx1P48377 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.44□□□□□ -2.48
Rfx1P48377 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.45□□□□□ -2.48
Rfx1P48377 Mir96-201ENSMUST00000083652 106 ntBASIC-0.45□□□□□ -2.48
Rfx1P48377 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.46□□□□□ -2.48
Rfx1P48377 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.48□□□□□ -2.49
Rfx1P48377 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.48□□□□□ -2.49
Rfx1P48377 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.48□□□□□ -2.49
Rfx1P48377 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.48□□□□□ -2.49
Rfx1P48377 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.49□□□□□ -2.49
Rfx1P48377 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.49□□□□□ -2.49
Rfx1P48377 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.49□□□□□ -2.49
Rfx1P48377 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.5□□□□□ -2.49
Rfx1P48377 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.5□□□□□ -2.49
Rfx1P48377 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.5□□□□□ -2.49
Rfx1P48377 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.5□□□□□ -2.49
Rfx1P48377 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.51□□□□□ -2.49
Rfx1P48377 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.51□□□□□ -2.49
Rfx1P48377 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.52□□□□□ -2.49
Rfx1P48377 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.52□□□□□ -2.49
Rfx1P48377 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.53□□□□□ -2.49
Rfx1P48377 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.53□□□□□ -2.49
Rfx1P48377 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.54□□□□□ -2.5
Rfx1P48377 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.54□□□□□ -2.5
Rfx1P48377 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.54□□□□□ -2.5
Rfx1P48377 Mir702-201ENSMUST00000102285 109 ntBASIC-0.55□□□□□ -2.5
Rfx1P48377 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.55□□□□□ -2.5
Rfx1P48377 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.55□□□□□ -2.5
Rfx1P48377 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.56□□□□□ -2.5
Rfx1P48377 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.56□□□□□ -2.5
Rfx1P48377 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.56□□□□□ -2.5
Rfx1P48377 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.57□□□□□ -2.5
Rfx1P48377 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.58□□□□□ -2.5
Rfx1P48377 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.58□□□□□ -2.5
Rfx1P48377 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.58□□□□□ -2.5
Rfx1P48377 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.59□□□□□ -2.5
Rfx1P48377 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.59□□□□□ -2.5
Rfx1P48377 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.59□□□□□ -2.5
Rfx1P48377 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.59□□□□□ -2.5
Rfx1P48377 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.6□□□□□ -2.51
Rfx1P48377 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.6□□□□□ -2.51
Rfx1P48377 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.62□□□□□ -2.51
Rfx1P48377 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.63□□□□□ -2.51
Rfx1P48377 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.63□□□□□ -2.51
Rfx1P48377 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.64□□□□□ -2.51
Rfx1P48377 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.64□□□□□ -2.51
Rfx1P48377 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.64□□□□□ -2.51
Rfx1P48377 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.64□□□□□ -2.51
Rfx1P48377 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.65□□□□□ -2.51
Rfx1P48377 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.65□□□□□ -2.51
Rfx1P48377 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.65□□□□□ -2.51
Rfx1P48377 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.65□□□□□ -2.51
Rfx1P48377 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.65□□□□□ -2.51
Rfx1P48377 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.66□□□□□ -2.52
Rfx1P48377 Mir136-201ENSMUST00000199494 62 ntBASIC-0.66□□□□□ -2.52
Rfx1P48377 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
Rfx1P48377 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
Rfx1P48377 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.68□□□□□ -2.52
Rfx1P48377 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.69□□□□□ -2.52
Rfx1P48377 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.69□□□□□ -2.52
Rfx1P48377 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.69□□□□□ -2.52
Rfx1P48377 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.7□□□□□ -2.52
Rfx1P48377 Mir677-202ENSMUST00000197076 78 ntBASIC-0.7□□□□□ -2.52
Rfx1P48377 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.71□□□□□ -2.52
Rfx1P48377 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.71□□□□□ -2.52
Rfx1P48377 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.72□□□□□ -2.52
Rfx1P48377 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.73□□□□□ -2.53
Rfx1P48377 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.74□□□□□ -2.53
Rfx1P48377 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.75□□□□□ -2.53
Rfx1P48377 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.75□□□□□ -2.53
Rfx1P48377 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.78□□□□□ -2.53
Rfx1P48377 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.79□□□□□ -2.54
Rfx1P48377 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.79□□□□□ -2.54
Rfx1P48377 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.8□□□□□ -2.54
Rfx1P48377 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.81□□□□□ -2.54
Rfx1P48377 Mir335-201ENSMUST00000083567 98 ntBASIC-0.81□□□□□ -2.54
Rfx1P48377 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.82□□□□□ -2.54
Rfx1P48377 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
Rfx1P48377 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.83□□□□□ -2.54
Rfx1P48377 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.84□□□□□ -2.54
Rfx1P48377 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.85□□□□□ -2.55
Rfx1P48377 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.86□□□□□ -2.55
Rfx1P48377 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.87□□□□□ -2.55
Rfx1P48377 Gm23637-201ENSMUST00000175075 94 ntBASIC-0.87□□□□□ -2.55
Rfx1P48377 Mir351-201ENSMUST00000083569 99 ntBASIC-0.87□□□□□ -2.55
Rfx1P48377 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.88□□□□□ -2.55
Rfx1P48377 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.9□□□□□ -2.55
Rfx1P48377 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.91□□□□□ -2.56
Rfx1P48377 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.92□□□□□ -2.56
Rfx1P48377 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.93□□□□□ -2.56
Rfx1P48377 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.93□□□□□ -2.56
Rfx1P48377 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.95□□□□□ -2.56
Rfx1P48377 Gm44351-201ENSMUST00000200090 95 ntBASIC-0.95□□□□□ -2.56
Rfx1P48377 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.96□□□□□ -2.56
Rfx1P48377 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.96□□□□□ -2.56
Rfx1P48377 Gm24538-201ENSMUST00000082612 107 ntBASIC-0.96□□□□□ -2.56
Rfx1P48377 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms