Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 CT010505.1-201ENSMUST00000227026 396 ntBASIC-4,03□□□□□ -3,05
HttP42859 Gm25482-201ENSMUST00000083225 107 ntBASIC-4,04□□□□□ -3,06
HttP42859 Gm26253-201ENSMUST00000122493 103 ntBASIC-4,05□□□□□ -3,06
HttP42859 Gm27845-201ENSMUST00000184479 114 ntBASIC-4,06□□□□□ -3,06
HttP42859 Snord58b-201ENSMUST00000082937 66 ntBASIC-4,07□□□□□ -3,06
HttP42859 Gm14838-201ENSMUST00000118913 248 ntBASIC-4,07□□□□□ -3,06
HttP42859 Mir466e-201ENSMUST00000198862 84 ntBASIC-4,08□□□□□ -3,06
HttP42859 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-4,08□□□□□ -3,06
HttP42859 Gm13059-201ENSMUST00000119881 398 ntBASIC-4,08□□□□□ -3,06
HttP42859 Gm22490-201ENSMUST00000157188 119 ntBASIC-4,08□□□□□ -3,06
HttP42859 Mir7681-201ENSMUST00000184834 72 ntBASIC-4,09□□□□□ -3,06
HttP42859 Mir3083-201ENSMUST00000175377 64 ntBASIC-4,1□□□□□ -3,07
HttP42859 AC157278.1-201ENSMUST00000221621 148 ntBASIC-4,1□□□□□ -3,07
HttP42859 Gm23790-201ENSMUST00000083013 107 ntBASIC-4,1□□□□□ -3,07
HttP42859 Gm22349-201ENSMUST00000157864 107 ntBASIC-4,1□□□□□ -3,07
HttP42859 Gm24378-201ENSMUST00000122699 106 ntBASIC-4,11□□□□□ -3,07
HttP42859 Gm22039-201ENSMUST00000157278 132 ntBASIC-4,12□□□□□ -3,07
HttP42859 Gm27694-201ENSMUST00000184740 86 ntBASIC-4,12□□□□□ -3,07
HttP42859 Gm27450-201ENSMUST00000104632 90 ntBASIC-4,13□□□□□ -3,07
HttP42859 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-4,15□□□□□ -3,07
HttP42859 Gm22555-201ENSMUST00000157801 62 ntBASIC-4,15□□□□□ -3,07
HttP42859 Mir1950-201ENSMUST00000158526 74 ntBASIC-4,16□□□□□ -3,07
HttP42859 Gm23990-201ENSMUST00000117031 117 ntBASIC-4,16□□□□□ -3,08
HttP42859 Gm22255-201ENSMUST00000177933 79 ntBASIC-4,17□□□□□ -3,08
HttP42859 Gm23254-201ENSMUST00000097244 79 ntBASIC-4,17□□□□□ -3,08
HttP42859 Gm24498-201ENSMUST00000158445 102 ntBASIC-4,21□□□□□ -3,08
HttP42859 Gm23209-201ENSMUST00000158667 110 ntBASIC-4,21□□□□□ -3,08
HttP42859 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-4,21□□□□□ -3,08
HttP42859 Gm23248-201ENSMUST00000083367 108 ntBASIC-4,22□□□□□ -3,08
HttP42859 Gm44303-201ENSMUST00000196348 83 ntBASIC-4,22□□□□□ -3,09
HttP42859 Gm23376-201ENSMUST00000082938 160 ntBASIC-4,23□□□□□ -3,09
HttP42859 Gm22474-201ENSMUST00000179407 107 ntBASIC-4,24□□□□□ -3,09
HttP42859 Gm24710-201ENSMUST00000175235 101 ntBASIC-4,24□□□□□ -3,09
HttP42859 Gm24135-201ENSMUST00000179085 101 ntBASIC-4,24□□□□□ -3,09
HttP42859 Gm26227-201ENSMUST00000082510 101 ntBASIC-4,27□□□□□ -3,09
HttP42859 Gm24106-201ENSMUST00000175498 127 ntBASIC-4,28□□□□□ -3,09
HttP42859 Gm24495-201ENSMUST00000178575 79 ntBASIC-4,28□□□□□ -3,09
HttP42859 Gm22253-201ENSMUST00000179870 79 ntBASIC-4,28□□□□□ -3,09
HttP42859 Gm24226-201ENSMUST00000158826 97 ntBASIC-4,29□□□□□ -3,1
HttP42859 Gm44470-201ENSMUST00000203913 142 ntBASIC-4,3□□□□□ -3,1
HttP42859 Gm26139-201ENSMUST00000180098 107 ntBASIC-4,31□□□□□ -3,1
HttP42859 Gm22078-201ENSMUST00000157593 103 ntBASIC-4,32□□□□□ -3,1
HttP42859 Gm25465-201ENSMUST00000157716 105 ntBASIC-4,32□□□□□ -3,1
HttP42859 Gm22095-201ENSMUST00000158984 150 ntBASIC-4,32□□□□□ -3,1
HttP42859 Mir466-201ENSMUST00000093591 73 ntBASIC-4,33□□□□□ -3,1
HttP42859 Gm22491-201ENSMUST00000157190 102 ntBASIC-4,33□□□□□ -3,1
HttP42859 Gm27317-201ENSMUST00000183533 95 ntBASIC-4,33□□□□□ -3,1
HttP42859 Gm26485-201ENSMUST00000158019 64 ntBASIC-4,34□□□□□ -3,1
HttP42859 Gm25222-201ENSMUST00000158199 126 ntBASIC-4,34□□□□□ -3,1
HttP42859 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4,34□□□□□ -3,1
HttP42859 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-4,35□□□□□ -3,11
HttP42859 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-4,35□□□□□ -3,11
HttP42859 Gm22127-201ENSMUST00000083239 106 ntBASIC-4,36□□□□□ -3,11
HttP42859 Gm29107-201ENSMUST00000190910 347 ntBASIC-4,39□□□□□ -3,11
HttP42859 Gm24926-201ENSMUST00000178053 79 ntBASIC-4,4□□□□□ -3,11
HttP42859 Gm22632-201ENSMUST00000178266 79 ntBASIC-4,4□□□□□ -3,11
HttP42859 Gm24916-201ENSMUST00000157287 79 ntBASIC-4,41□□□□□ -3,11
HttP42859 Gm24674-201ENSMUST00000179194 104 ntBASIC-4,42□□□□□ -3,12
HttP42859 Gm23922-201ENSMUST00000178792 79 ntBASIC-4,46□□□□□ -3,12
HttP42859 Gm24657-201ENSMUST00000180085 79 ntBASIC-4,46□□□□□ -3,12
HttP42859 Gm22996-201ENSMUST00000180236 79 ntBASIC-4,46□□□□□ -3,12
HttP42859 mt-Tf-201ENSMUST00000082387 68 ntBASIC-4,47□□□□□ -3,12
HttP42859 Gm23044-201ENSMUST00000157891 100 ntBASIC-4,48□□□□□ -3,13
HttP42859 Gm14837-201ENSMUST00000119688 206 ntBASIC-4,49□□□□□ -3,13
HttP42859 Snord47-201ENSMUST00000083034 77 ntBASIC-4,49□□□□□ -3,13
HttP42859 Gm11966-201ENSMUST00000119907 87 ntBASIC-4,5□□□□□ -3,13
HttP42859 Gm22301-201ENSMUST00000082656 107 ntBASIC-4,5□□□□□ -3,13
HttP42859 Gm22885-201ENSMUST00000157410 107 ntBASIC-4,5□□□□□ -3,13
HttP42859 Gm24194-201ENSMUST00000116805 90 ntBASIC-4,51□□□□□ -3,13
HttP42859 Gm10813-201ENSMUST00000099936 90 ntBASIC-4,51□□□□□ -3,13
HttP42859 Gm24410-201ENSMUST00000083433 107 ntBASIC-4,52□□□□□ -3,13
HttP42859 Snord70-201ENSMUST00000104157 87 ntBASIC-4,55□□□□□ -3,14
HttP42859 Gm22729-201ENSMUST00000158088 129 ntBASIC-4,55□□□□□ -3,14
HttP42859 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-4,55□□□□□ -3,14
HttP42859 Gm23678-201ENSMUST00000083157 107 ntBASIC-4,56□□□□□ -3,14
HttP42859 Gm23434-201ENSMUST00000157179 100 ntBASIC-4,57□□□□□ -3,14
HttP42859 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-4,6□□□□□ -3,15
HttP42859 Gm22354-201ENSMUST00000083919 70 ntBASIC-4,61□□□□□ -3,15
HttP42859 AC160962.3-201ENSMUST00000225914 112 ntBASIC-4,64□□□□□ -3,15
HttP42859 Gm23785-201ENSMUST00000116741 96 ntBASIC-4,65□□□□□ -3,15
HttP42859 Gm24211-201ENSMUST00000158264 107 ntBASIC-4,65□□□□□ -3,15
HttP42859 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-4,65□□□□□ -3,15
HttP42859 Gm25920-201ENSMUST00000158307 99 ntBASIC-4,66□□□□□ -3,15
HttP42859 Gm24035-201ENSMUST00000082867 107 ntBASIC-4,66□□□□□ -3,15
HttP42859 Gm23244-201ENSMUST00000083375 92 ntBASIC-4,66□□□□□ -3,16
HttP42859 Mir1187-201ENSMUST00000116936 122 ntBASIC-4,68□□□□□ -3,16
HttP42859 Gm24750-201ENSMUST00000157843 104 ntBASIC-4,68□□□□□ -3,16
HttP42859 Gm27332-201ENSMUST00000184893 112 ntBASIC-4,69□□□□□ -3,16
HttP42859 Mir466h-201ENSMUST00000104748 81 ntBASIC-4,69□□□□□ -3,16
HttP42859 Gm22550-201ENSMUST00000179774 107 ntBASIC-4,7□□□□□ -3,16
HttP42859 Gm22060-201ENSMUST00000082558 107 ntBASIC-4,7□□□□□ -3,16
HttP42859 Gm22080-201ENSMUST00000157591 106 ntBASIC-4,71□□□□□ -3,16
HttP42859 Gm26159-201ENSMUST00000158968 104 ntBASIC-4,72□□□□□ -3,17
HttP42859 AC164561.1-201ENSMUST00000220414 115 ntBASIC-4,73□□□□□ -3,17
HttP42859 Gm43505-201ENSMUST00000200579 139 ntBASIC-4,73□□□□□ -3,17
HttP42859 Gm24457-201ENSMUST00000083196 105 ntBASIC-4,77□□□□□ -3,17
HttP42859 Gm22836-201ENSMUST00000158441 61 ntBASIC-4,78□□□□□ -3,17
HttP42859 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-4,8□□□□□ -3,18
HttP42859 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-4,8□□□□□ -3,18
HttP42859 Gm23961-201ENSMUST00000104685 97 ntBASIC-4,81□□□□□ -3,18
Retrieved 100 of 76,532 protein–RNA pairs in 128,9 ms