Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.17□□□□□ -2.6
Traf1P39428 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.18□□□□□ -2.6
Traf1P39428 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.18□□□□□ -2.6
Traf1P39428 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.18□□□□□ -2.6
Traf1P39428 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.19□□□□□ -2.6
Traf1P39428 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.2□□□□□ -2.6
Traf1P39428 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.21□□□□□ -2.6
Traf1P39428 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.21□□□□□ -2.6
Traf1P39428 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.22□□□□□ -2.6
Traf1P39428 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.22□□□□□ -2.6
Traf1P39428 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.23□□□□□ -2.61
Traf1P39428 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.23□□□□□ -2.61
Traf1P39428 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.23□□□□□ -2.61
Traf1P39428 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.23□□□□□ -2.61
Traf1P39428 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.24□□□□□ -2.61
Traf1P39428 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.25□□□□□ -2.61
Traf1P39428 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.25□□□□□ -2.61
Traf1P39428 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.25□□□□□ -2.61
Traf1P39428 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.26□□□□□ -2.61
Traf1P39428 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.27□□□□□ -2.61
Traf1P39428 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.28□□□□□ -2.61
Traf1P39428 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.28□□□□□ -2.61
Traf1P39428 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.28□□□□□ -2.61
Traf1P39428 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.28□□□□□ -2.61
Traf1P39428 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.28□□□□□ -2.61
Traf1P39428 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.29□□□□□ -2.62
Traf1P39428 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.3□□□□□ -2.62
Traf1P39428 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
Traf1P39428 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
Traf1P39428 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.31□□□□□ -2.62
Traf1P39428 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.32□□□□□ -2.62
Traf1P39428 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.32□□□□□ -2.62
Traf1P39428 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.33□□□□□ -2.62
Traf1P39428 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.33□□□□□ -2.62
Traf1P39428 Mir122-201ENSMUST00000083468 66 ntBASIC-1.33□□□□□ -2.62
Traf1P39428 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.34□□□□□ -2.62
Traf1P39428 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.34□□□□□ -2.62
Traf1P39428 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.34□□□□□ -2.62
Traf1P39428 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.34□□□□□ -2.62
Traf1P39428 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.35□□□□□ -2.63
Traf1P39428 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.35□□□□□ -2.63
Traf1P39428 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Traf1P39428 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
Traf1P39428 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.36□□□□□ -2.63
Traf1P39428 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.36□□□□□ -2.63
Traf1P39428 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.37□□□□□ -2.63
Traf1P39428 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.37□□□□□ -2.63
Traf1P39428 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.38□□□□□ -2.63
Traf1P39428 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.38□□□□□ -2.63
Traf1P39428 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.38□□□□□ -2.63
Traf1P39428 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.39□□□□□ -2.63
Traf1P39428 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.4□□□□□ -2.63
Traf1P39428 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.41□□□□□ -2.64
Traf1P39428 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.41□□□□□ -2.64
Traf1P39428 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.41□□□□□ -2.64
Traf1P39428 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.41□□□□□ -2.64
Traf1P39428 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.42□□□□□ -2.64
Traf1P39428 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.42□□□□□ -2.64
Traf1P39428 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.42□□□□□ -2.64
Traf1P39428 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Mir367-201ENSMUST00000083479 75 ntBASIC-1.43□□□□□ -2.64
Traf1P39428 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.46□□□□□ -2.64
Traf1P39428 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.47□□□□□ -2.64
Traf1P39428 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.48□□□□□ -2.65
Traf1P39428 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.48□□□□□ -2.65
Traf1P39428 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.48□□□□□ -2.65
Traf1P39428 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.48□□□□□ -2.65
Traf1P39428 Mir379-201ENSMUST00000083564 66 ntBASIC-1.48□□□□□ -2.65
Traf1P39428 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
Traf1P39428 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.49□□□□□ -2.65
Traf1P39428 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.49□□□□□ -2.65
Traf1P39428 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.49□□□□□ -2.65
Traf1P39428 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.49□□□□□ -2.65
Traf1P39428 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.5□□□□□ -2.65
Traf1P39428 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.5□□□□□ -2.65
Traf1P39428 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.51□□□□□ -2.65
Traf1P39428 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.51□□□□□ -2.65
Traf1P39428 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms