Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22127-201ENSMUST00000083239 106 ntBASIC0.06□□□□□ -2.4
RaraP11416 Mir1955-201ENSMUST00000158014 98 ntBASIC0.05□□□□□ -2.4
RaraP11416 Gm25249-201ENSMUST00000175471 78 ntBASIC0.04□□□□□ -2.4
RaraP11416 Mir7043-201ENSMUST00000184219 70 ntBASIC0.04□□□□□ -2.4
RaraP11416 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.02□□□□□ -2.41
RaraP11416 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
RaraP11416 Gm25862-201ENSMUST00000158250 129 ntBASIC0□□□□□ -2.41
RaraP11416 Gm45374-201ENSMUST00000211388 136 ntBASIC0□□□□□ -2.41
RaraP11416 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.01□□□□□ -2.41
RaraP11416 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.01□□□□□ -2.41
RaraP11416 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.02□□□□□ -2.41
RaraP11416 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.02□□□□□ -2.41
RaraP11416 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.03□□□□□ -2.41
RaraP11416 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.04□□□□□ -2.42
RaraP11416 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.04□□□□□ -2.42
RaraP11416 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.04□□□□□ -2.42
RaraP11416 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.05□□□□□ -2.42
RaraP11416 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.05□□□□□ -2.42
RaraP11416 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.06□□□□□ -2.42
RaraP11416 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.06□□□□□ -2.42
RaraP11416 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
RaraP11416 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.08□□□□□ -2.42
RaraP11416 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.09□□□□□ -2.42
RaraP11416 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.09□□□□□ -2.42
RaraP11416 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.09□□□□□ -2.42
RaraP11416 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.09□□□□□ -2.42
RaraP11416 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.1□□□□□ -2.43
RaraP11416 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.1□□□□□ -2.43
RaraP11416 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.1□□□□□ -2.43
RaraP11416 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.1□□□□□ -2.43
RaraP11416 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.11□□□□□ -2.43
RaraP11416 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.11□□□□□ -2.43
RaraP11416 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.11□□□□□ -2.43
RaraP11416 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.11□□□□□ -2.43
RaraP11416 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.13□□□□□ -2.43
RaraP11416 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
RaraP11416 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.14□□□□□ -2.43
RaraP11416 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.15□□□□□ -2.43
RaraP11416 Mir136-201ENSMUST00000199494 62 ntBASIC-0.15□□□□□ -2.43
RaraP11416 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.15□□□□□ -2.43
RaraP11416 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.16□□□□□ -2.44
RaraP11416 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.17□□□□□ -2.44
RaraP11416 Gm24531-201ENSMUST00000157945 100 ntBASIC-0.17□□□□□ -2.44
RaraP11416 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.17□□□□□ -2.44
RaraP11416 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.2□□□□□ -2.44
RaraP11416 Mir295-201ENSMUST00000104694 69 ntBASIC-0.21□□□□□ -2.44
RaraP11416 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.21□□□□□ -2.44
RaraP11416 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
RaraP11416 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.22□□□□□ -2.44
RaraP11416 Mir183-201ENSMUST00000083685 70 ntBASIC-0.22□□□□□ -2.44
RaraP11416 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.23□□□□□ -2.45
RaraP11416 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.25□□□□□ -2.45
RaraP11416 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.26□□□□□ -2.45
RaraP11416 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.27□□□□□ -2.45
RaraP11416 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
RaraP11416 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.27□□□□□ -2.45
RaraP11416 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.28□□□□□ -2.45
RaraP11416 Snord8-201ENSMUST00000175303 110 ntBASIC-0.28□□□□□ -2.45
RaraP11416 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.31□□□□□ -2.46
RaraP11416 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.31□□□□□ -2.46
RaraP11416 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.31□□□□□ -2.46
RaraP11416 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.32□□□□□ -2.46
RaraP11416 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.32□□□□□ -2.46
RaraP11416 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.32□□□□□ -2.46
RaraP11416 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.32□□□□□ -2.46
RaraP11416 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.33□□□□□ -2.46
RaraP11416 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.33□□□□□ -2.46
RaraP11416 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.33□□□□□ -2.46
RaraP11416 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.33□□□□□ -2.46
RaraP11416 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.34□□□□□ -2.46
RaraP11416 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.34□□□□□ -2.46
RaraP11416 Gm22550-201ENSMUST00000179774 107 ntBASIC-0.35□□□□□ -2.47
RaraP11416 Gm22060-201ENSMUST00000082558 107 ntBASIC-0.35□□□□□ -2.47
RaraP11416 Mir96-201ENSMUST00000083652 106 ntBASIC-0.35□□□□□ -2.47
RaraP11416 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.36□□□□□ -2.47
RaraP11416 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.37□□□□□ -2.47
RaraP11416 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.38□□□□□ -2.47
RaraP11416 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.38□□□□□ -2.47
RaraP11416 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.39□□□□□ -2.47
RaraP11416 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.39□□□□□ -2.47
RaraP11416 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.4□□□□□ -2.47
RaraP11416 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.41□□□□□ -2.48
RaraP11416 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.41□□□□□ -2.48
RaraP11416 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.43□□□□□ -2.48
RaraP11416 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.43□□□□□ -2.48
RaraP11416 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.44□□□□□ -2.48
RaraP11416 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.45□□□□□ -2.48
RaraP11416 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.45□□□□□ -2.48
RaraP11416 Mir367-201ENSMUST00000083479 75 ntBASIC-0.46□□□□□ -2.48
RaraP11416 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.46□□□□□ -2.48
RaraP11416 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.46□□□□□ -2.48
RaraP11416 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.47□□□□□ -2.48
RaraP11416 Gm25886-201ENSMUST00000157780 114 ntBASIC-0.47□□□□□ -2.48
RaraP11416 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.47□□□□□ -2.48
RaraP11416 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.47□□□□□ -2.48
RaraP11416 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.47□□□□□ -2.48
RaraP11416 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.48□□□□□ -2.49
RaraP11416 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.49□□□□□ -2.49
RaraP11416 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.5□□□□□ -2.49
RaraP11416 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms