Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm24651-201ENSMUST00000157107 107 ntBASIC0.1□□□□□ -2.39
Col3a1P08121 Gm22607-201ENSMUST00000158291 105 ntBASIC0.1□□□□□ -2.39
Col3a1P08121 Gm22327-201ENSMUST00000158899 108 ntBASIC0.1□□□□□ -2.39
Col3a1P08121 Snord42b-201ENSMUST00000083742 69 ntBASIC0.1□□□□□ -2.39
Col3a1P08121 Gm25862-201ENSMUST00000158250 129 ntBASIC0.09□□□□□ -2.4
Col3a1P08121 Mir214-201ENSMUST00000083582 110 ntBASIC0.09□□□□□ -2.4
Col3a1P08121 Snord91a-201ENSMUST00000104305 93 ntBASIC0.08□□□□□ -2.4
Col3a1P08121 Gm25249-201ENSMUST00000175471 78 ntBASIC0.08□□□□□ -2.4
Col3a1P08121 Mir297b-201ENSMUST00000102268 109 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm22368-201ENSMUST00000102416 109 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Mir295-201ENSMUST00000104694 69 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm25388-201ENSMUST00000157339 151 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm25132-201ENSMUST00000082652 107 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm25137-201ENSMUST00000083251 110 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm22056-201ENSMUST00000083386 81 ntBASIC0.07□□□□□ -2.4
Col3a1P08121 Gm26210-201ENSMUST00000158680 91 ntBASIC0.06□□□□□ -2.4
Col3a1P08121 Gm42773-201ENSMUST00000196962 148 ntBASIC0.06□□□□□ -2.4
Col3a1P08121 Gm22550-201ENSMUST00000179774 107 ntBASIC0.05□□□□□ -2.4
Col3a1P08121 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.05□□□□□ -2.4
Col3a1P08121 Gm22060-201ENSMUST00000082558 107 ntBASIC0.05□□□□□ -2.4
Col3a1P08121 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.04□□□□□ -2.4
Col3a1P08121 Gm22446-201ENSMUST00000180108 104 ntBASIC0.04□□□□□ -2.4
Col3a1P08121 Mir18b-201ENSMUST00000103923 83 ntBASIC0.03□□□□□ -2.4
Col3a1P08121 Gm23812-201ENSMUST00000175156 84 ntBASIC0.03□□□□□ -2.4
Col3a1P08121 Gm23374-201ENSMUST00000175408 84 ntBASIC0.03□□□□□ -2.4
Col3a1P08121 Mir6964-201ENSMUST00000200252 59 ntBASIC0.03□□□□□ -2.4
Col3a1P08121 Gm25431-201ENSMUST00000101978 107 ntBASIC0.03□□□□□ -2.41
Col3a1P08121 Gm22324-201ENSMUST00000158903 114 ntBASIC0.03□□□□□ -2.41
Col3a1P08121 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.41
Col3a1P08121 Gm23909-201ENSMUST00000104598 131 ntBASIC0.02□□□□□ -2.41
Col3a1P08121 Mir145b-201ENSMUST00000184434 75 ntBASIC0.02□□□□□ -2.41
Col3a1P08121 Gm22305-201ENSMUST00000082690 108 ntBASIC0.01□□□□□ -2.41
Col3a1P08121 Gm23483-201ENSMUST00000104179 108 ntBASIC0□□□□□ -2.41
Col3a1P08121 Gm24336-201ENSMUST00000104203 146 ntBASIC0□□□□□ -2.41
Col3a1P08121 Mir136-201ENSMUST00000199494 62 ntBASIC0□□□□□ -2.41
Col3a1P08121 Gm22813-201ENSMUST00000199948 123 ntBASIC0□□□□□ -2.41
Col3a1P08121 Gm25023-201ENSMUST00000082977 107 ntBASIC0□□□□□ -2.41
Col3a1P08121 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.01□□□□□ -2.41
Col3a1P08121 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Col3a1P08121 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.02□□□□□ -2.41
Col3a1P08121 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.02□□□□□ -2.41
Col3a1P08121 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.02□□□□□ -2.41
Col3a1P08121 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.03□□□□□ -2.41
Col3a1P08121 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.03□□□□□ -2.41
Col3a1P08121 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.04□□□□□ -2.42
Col3a1P08121 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.05□□□□□ -2.42
Col3a1P08121 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.05□□□□□ -2.42
Col3a1P08121 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.06□□□□□ -2.42
Col3a1P08121 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.06□□□□□ -2.42
Col3a1P08121 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.06□□□□□ -2.42
Col3a1P08121 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.06□□□□□ -2.42
Col3a1P08121 Gm22232-201ENSMUST00000104654 94 ntBASIC-0.07□□□□□ -2.42
Col3a1P08121 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.07□□□□□ -2.42
Col3a1P08121 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.08□□□□□ -2.42
Col3a1P08121 Gm24194-201ENSMUST00000116805 90 ntBASIC-0.09□□□□□ -2.42
Col3a1P08121 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.09□□□□□ -2.42
Col3a1P08121 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.09□□□□□ -2.42
Col3a1P08121 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.1□□□□□ -2.43
Col3a1P08121 Gm22593-201ENSMUST00000104245 109 ntBASIC-0.11□□□□□ -2.43
Col3a1P08121 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.11□□□□□ -2.43
Col3a1P08121 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.11□□□□□ -2.43
Col3a1P08121 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.11□□□□□ -2.43
Col3a1P08121 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.12□□□□□ -2.43
Col3a1P08121 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.12□□□□□ -2.43
Col3a1P08121 Mir367-201ENSMUST00000083479 75 ntBASIC-0.12□□□□□ -2.43
Col3a1P08121 Mir96-201ENSMUST00000083652 106 ntBASIC-0.13□□□□□ -2.43
Col3a1P08121 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.14□□□□□ -2.43
Col3a1P08121 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.14□□□□□ -2.43
Col3a1P08121 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.15□□□□□ -2.43
Col3a1P08121 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.15□□□□□ -2.43
Col3a1P08121 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.15□□□□□ -2.43
Col3a1P08121 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.16□□□□□ -2.43
Col3a1P08121 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.16□□□□□ -2.43
Col3a1P08121 Gm20473-201ENSMUST00000173064 112 ntBASIC-0.16□□□□□ -2.43
Col3a1P08121 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.16□□□□□ -2.43
Col3a1P08121 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.16□□□□□ -2.44
Col3a1P08121 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.16□□□□□ -2.44
Col3a1P08121 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.16□□□□□ -2.44
Col3a1P08121 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.16□□□□□ -2.44
Col3a1P08121 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.16□□□□□ -2.44
Col3a1P08121 Gm23315-201ENSMUST00000158003 109 ntBASIC-0.18□□□□□ -2.44
Col3a1P08121 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.18□□□□□ -2.44
Col3a1P08121 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.18□□□□□ -2.44
Col3a1P08121 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.18□□□□□ -2.44
Col3a1P08121 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.19□□□□□ -2.44
Col3a1P08121 Gm22925-201ENSMUST00000174956 102 ntBASIC-0.19□□□□□ -2.44
Col3a1P08121 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.2□□□□□ -2.44
Col3a1P08121 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.2□□□□□ -2.44
Col3a1P08121 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.2□□□□□ -2.44
Col3a1P08121 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.2□□□□□ -2.44
Col3a1P08121 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.2□□□□□ -2.44
Col3a1P08121 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.21□□□□□ -2.44
Col3a1P08121 Mir677-202ENSMUST00000197076 78 ntBASIC-0.21□□□□□ -2.44
Col3a1P08121 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Col3a1P08121 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.22□□□□□ -2.44
Col3a1P08121 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.22□□□□□ -2.44
Col3a1P08121 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-0.22□□□□□ -2.45
Col3a1P08121 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.23□□□□□ -2.45
Col3a1P08121 Snord58b-201ENSMUST00000082937 66 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms