Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.37□□□□□ -2.63
Capn1O35350 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.39□□□□□ -2.63
Capn1O35350 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.39□□□□□ -2.63
Capn1O35350 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.39□□□□□ -2.63
Capn1O35350 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.4□□□□□ -2.63
Capn1O35350 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.4□□□□□ -2.63
Capn1O35350 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.41□□□□□ -2.64
Capn1O35350 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.42□□□□□ -2.64
Capn1O35350 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
Capn1O35350 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.43□□□□□ -2.64
Capn1O35350 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.43□□□□□ -2.64
Capn1O35350 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.44□□□□□ -2.64
Capn1O35350 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.44□□□□□ -2.64
Capn1O35350 Mir494-201ENSMUST00000093632 85 ntBASIC-1.44□□□□□ -2.64
Capn1O35350 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.45□□□□□ -2.64
Capn1O35350 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.45□□□□□ -2.64
Capn1O35350 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.46□□□□□ -2.64
Capn1O35350 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.46□□□□□ -2.64
Capn1O35350 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.47□□□□□ -2.64
Capn1O35350 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
Capn1O35350 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.47□□□□□ -2.64
Capn1O35350 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.47□□□□□ -2.64
Capn1O35350 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.49□□□□□ -2.65
Capn1O35350 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.5□□□□□ -2.65
Capn1O35350 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.51□□□□□ -2.65
Capn1O35350 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.52□□□□□ -2.65
Capn1O35350 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.52□□□□□ -2.65
Capn1O35350 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.53□□□□□ -2.65
Capn1O35350 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.54□□□□□ -2.66
Capn1O35350 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.55□□□□□ -2.66
Capn1O35350 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.55□□□□□ -2.66
Capn1O35350 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.55□□□□□ -2.66
Capn1O35350 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.55□□□□□ -2.66
Capn1O35350 Mir122-201ENSMUST00000083468 66 ntBASIC-1.55□□□□□ -2.66
Capn1O35350 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.57□□□□□ -2.66
Capn1O35350 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.58□□□□□ -2.66
Capn1O35350 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.6□□□□□ -2.67
Capn1O35350 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.61□□□□□ -2.67
Capn1O35350 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.61□□□□□ -2.67
Capn1O35350 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.65□□□□□ -2.67
Capn1O35350 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.66□□□□□ -2.68
Capn1O35350 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.66□□□□□ -2.68
Capn1O35350 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.67□□□□□ -2.68
Capn1O35350 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.68□□□□□ -2.68
Capn1O35350 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.69□□□□□ -2.68
Capn1O35350 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.7□□□□□ -2.68
Capn1O35350 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.7□□□□□ -2.68
Capn1O35350 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.7□□□□□ -2.68
Capn1O35350 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.71□□□□□ -2.68
Capn1O35350 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.71□□□□□ -2.68
Capn1O35350 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.71□□□□□ -2.68
Capn1O35350 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.71□□□□□ -2.68
Capn1O35350 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.73□□□□□ -2.69
Capn1O35350 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.73□□□□□ -2.69
Capn1O35350 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.73□□□□□ -2.69
Capn1O35350 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.74□□□□□ -2.69
Capn1O35350 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.75□□□□□ -2.69
Capn1O35350 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.76□□□□□ -2.69
Capn1O35350 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.77□□□□□ -2.69
Capn1O35350 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.77□□□□□ -2.69
Capn1O35350 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.77□□□□□ -2.69
Capn1O35350 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.78□□□□□ -2.69
Capn1O35350 Mir379-201ENSMUST00000083564 66 ntBASIC-1.79□□□□□ -2.7
Capn1O35350 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.81□□□□□ -2.7
Capn1O35350 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.82□□□□□ -2.7
Capn1O35350 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.83□□□□□ -2.7
Capn1O35350 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.83□□□□□ -2.7
Capn1O35350 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.85□□□□□ -2.71
Capn1O35350 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.86□□□□□ -2.71
Capn1O35350 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.86□□□□□ -2.71
Capn1O35350 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.87□□□□□ -2.71
Capn1O35350 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.87□□□□□ -2.71
Capn1O35350 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.87□□□□□ -2.71
Capn1O35350 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.88□□□□□ -2.71
Capn1O35350 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.88□□□□□ -2.71
Capn1O35350 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.88□□□□□ -2.71
Capn1O35350 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.89□□□□□ -2.71
Capn1O35350 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.9□□□□□ -2.71
Capn1O35350 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.9□□□□□ -2.71
Capn1O35350 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.91□□□□□ -2.72
Capn1O35350 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.93□□□□□ -2.72
Capn1O35350 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.93□□□□□ -2.72
Capn1O35350 Mir367-201ENSMUST00000083479 75 ntBASIC-1.93□□□□□ -2.72
Capn1O35350 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.94□□□□□ -2.72
Capn1O35350 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.94□□□□□ -2.72
Capn1O35350 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
Capn1O35350 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.96□□□□□ -2.72
Capn1O35350 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.97□□□□□ -2.72
Capn1O35350 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.98□□□□□ -2.73
Capn1O35350 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.98□□□□□ -2.73
Capn1O35350 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.98□□□□□ -2.73
Capn1O35350 Mir470-201ENSMUST00000093565 75 ntBASIC-1.98□□□□□ -2.73
Capn1O35350 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.99□□□□□ -2.73
Capn1O35350 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.99□□□□□ -2.73
Capn1O35350 Gm24297-201ENSMUST00000158300 68 ntBASIC-2□□□□□ -2.73
Capn1O35350 Gm25903-201ENSMUST00000158492 103 ntBASIC-2□□□□□ -2.73
Capn1O35350 Mir539-201ENSMUST00000102109 74 ntBASIC-2.01□□□□□ -2.73
Capn1O35350 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.01□□□□□ -2.73
Capn1O35350 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.01□□□□□ -2.73
Capn1O35350 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms