Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.86□□□□□ -2.55
H2afb2S4R1M3 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.86□□□□□ -2.55
H2afb2S4R1M3 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.86□□□□□ -2.55
H2afb2S4R1M3 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.86□□□□□ -2.55
H2afb2S4R1M3 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.87□□□□□ -2.55
H2afb2S4R1M3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.87□□□□□ -2.55
H2afb2S4R1M3 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.88□□□□□ -2.55
H2afb2S4R1M3 Gm25022-201ENSMUST00000102205 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.89□□□□□ -2.55
H2afb2S4R1M3 Mir136-201ENSMUST00000199494 62 ntBASIC-0.9□□□□□ -2.55
H2afb2S4R1M3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.9□□□□□ -2.55
H2afb2S4R1M3 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.9□□□□□ -2.55
H2afb2S4R1M3 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.9□□□□□ -2.55
H2afb2S4R1M3 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.91□□□□□ -2.56
H2afb2S4R1M3 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.91□□□□□ -2.56
H2afb2S4R1M3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.92□□□□□ -2.56
H2afb2S4R1M3 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.92□□□□□ -2.56
H2afb2S4R1M3 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.92□□□□□ -2.56
H2afb2S4R1M3 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.92□□□□□ -2.56
H2afb2S4R1M3 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.92□□□□□ -2.56
H2afb2S4R1M3 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.93□□□□□ -2.56
H2afb2S4R1M3 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.93□□□□□ -2.56
H2afb2S4R1M3 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.93□□□□□ -2.56
H2afb2S4R1M3 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.94□□□□□ -2.56
H2afb2S4R1M3 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.95□□□□□ -2.56
H2afb2S4R1M3 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.95□□□□□ -2.56
H2afb2S4R1M3 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.95□□□□□ -2.56
H2afb2S4R1M3 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.95□□□□□ -2.56
H2afb2S4R1M3 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.96□□□□□ -2.56
H2afb2S4R1M3 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.96□□□□□ -2.56
H2afb2S4R1M3 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.96□□□□□ -2.56
H2afb2S4R1M3 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.96□□□□□ -2.56
H2afb2S4R1M3 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Gm24331-201ENSMUST00000175099 67 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Gm23801-201ENSMUST00000175561 67 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Snord57-201ENSMUST00000083338 72 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.97□□□□□ -2.56
H2afb2S4R1M3 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.98□□□□□ -2.57
H2afb2S4R1M3 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.98□□□□□ -2.57
H2afb2S4R1M3 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.99□□□□□ -2.57
H2afb2S4R1M3 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.99□□□□□ -2.57
H2afb2S4R1M3 Gm26491-201ENSMUST00000179268 121 ntBASIC-1□□□□□ -2.57
H2afb2S4R1M3 Gm24612-201ENSMUST00000083267 107 ntBASIC-1□□□□□ -2.57
H2afb2S4R1M3 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.01□□□□□ -2.57
H2afb2S4R1M3 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.01□□□□□ -2.57
H2afb2S4R1M3 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.01□□□□□ -2.57
H2afb2S4R1M3 Mir141-201ENSMUST00000083540 72 ntBASIC-1.01□□□□□ -2.57
H2afb2S4R1M3 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.02□□□□□ -2.57
H2afb2S4R1M3 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.03□□□□□ -2.57
H2afb2S4R1M3 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.03□□□□□ -2.57
H2afb2S4R1M3 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.04□□□□□ -2.58
H2afb2S4R1M3 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.05□□□□□ -2.58
H2afb2S4R1M3 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.06□□□□□ -2.58
H2afb2S4R1M3 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.06□□□□□ -2.58
H2afb2S4R1M3 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.06□□□□□ -2.58
H2afb2S4R1M3 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.08□□□□□ -2.58
H2afb2S4R1M3 Gm27884-201ENSMUST00000183865 76 ntBASIC-1.08□□□□□ -2.58
H2afb2S4R1M3 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.08□□□□□ -2.58
H2afb2S4R1M3 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.09□□□□□ -2.58
H2afb2S4R1M3 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.09□□□□□ -2.58
H2afb2S4R1M3 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.09□□□□□ -2.58
H2afb2S4R1M3 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.1□□□□□ -2.59
H2afb2S4R1M3 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.11□□□□□ -2.59
H2afb2S4R1M3 Snord49b-201ENSMUST00000082503 72 ntBASIC-1.11□□□□□ -2.59
H2afb2S4R1M3 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.12□□□□□ -2.59
H2afb2S4R1M3 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.13□□□□□ -2.59
H2afb2S4R1M3 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.13□□□□□ -2.59
H2afb2S4R1M3 Gm25772-201ENSMUST00000158574 56 ntBASIC-1.13□□□□□ -2.59
H2afb2S4R1M3 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.13□□□□□ -2.59
H2afb2S4R1M3 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.13□□□□□ -2.59
H2afb2S4R1M3 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.14□□□□□ -2.59
H2afb2S4R1M3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.14□□□□□ -2.59
H2afb2S4R1M3 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.14□□□□□ -2.59
H2afb2S4R1M3 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.15□□□□□ -2.59
H2afb2S4R1M3 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.15□□□□□ -2.59
H2afb2S4R1M3 Gm27735-201ENSMUST00000185085 76 ntBASIC-1.15□□□□□ -2.59
H2afb2S4R1M3 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.15□□□□□ -2.59
H2afb2S4R1M3 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms