Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.82□□□□□ -2.54
H2afb1S4R1E0 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.82□□□□□ -2.54
H2afb1S4R1E0 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.83□□□□□ -2.54
H2afb1S4R1E0 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.83□□□□□ -2.54
H2afb1S4R1E0 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.83□□□□□ -2.54
H2afb1S4R1E0 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.83□□□□□ -2.54
H2afb1S4R1E0 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.83□□□□□ -2.54
H2afb1S4R1E0 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.84□□□□□ -2.54
H2afb1S4R1E0 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.84□□□□□ -2.54
H2afb1S4R1E0 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.85□□□□□ -2.55
H2afb1S4R1E0 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.85□□□□□ -2.55
H2afb1S4R1E0 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.85□□□□□ -2.55
H2afb1S4R1E0 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.85□□□□□ -2.55
H2afb1S4R1E0 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.87□□□□□ -2.55
H2afb1S4R1E0 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.87□□□□□ -2.55
H2afb1S4R1E0 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.87□□□□□ -2.55
H2afb1S4R1E0 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.87□□□□□ -2.55
H2afb1S4R1E0 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.88□□□□□ -2.55
H2afb1S4R1E0 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.88□□□□□ -2.55
H2afb1S4R1E0 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.89□□□□□ -2.55
H2afb1S4R1E0 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.89□□□□□ -2.55
H2afb1S4R1E0 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.89□□□□□ -2.55
H2afb1S4R1E0 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm24331-201ENSMUST00000175099 67 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm23801-201ENSMUST00000175561 67 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.9□□□□□ -2.55
H2afb1S4R1E0 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.91□□□□□ -2.56
H2afb1S4R1E0 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.91□□□□□ -2.56
H2afb1S4R1E0 Mir136-201ENSMUST00000199494 62 ntBASIC-0.91□□□□□ -2.56
H2afb1S4R1E0 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.92□□□□□ -2.56
H2afb1S4R1E0 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.92□□□□□ -2.56
H2afb1S4R1E0 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.92□□□□□ -2.56
H2afb1S4R1E0 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.92□□□□□ -2.56
H2afb1S4R1E0 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.92□□□□□ -2.56
H2afb1S4R1E0 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.93□□□□□ -2.56
H2afb1S4R1E0 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.93□□□□□ -2.56
H2afb1S4R1E0 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.93□□□□□ -2.56
H2afb1S4R1E0 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.93□□□□□ -2.56
H2afb1S4R1E0 Snord57-201ENSMUST00000083338 72 ntBASIC-0.93□□□□□ -2.56
H2afb1S4R1E0 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.94□□□□□ -2.56
H2afb1S4R1E0 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.94□□□□□ -2.56
H2afb1S4R1E0 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.96□□□□□ -2.56
H2afb1S4R1E0 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.96□□□□□ -2.56
H2afb1S4R1E0 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.96□□□□□ -2.56
H2afb1S4R1E0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.96□□□□□ -2.56
H2afb1S4R1E0 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.97□□□□□ -2.56
H2afb1S4R1E0 Gm23293-201ENSMUST00000082552 104 ntBASIC-0.98□□□□□ -2.57
H2afb1S4R1E0 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.98□□□□□ -2.57
H2afb1S4R1E0 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.99□□□□□ -2.57
H2afb1S4R1E0 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.99□□□□□ -2.57
H2afb1S4R1E0 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.99□□□□□ -2.57
H2afb1S4R1E0 Gm26257-201ENSMUST00000122500 107 ntBASIC-1□□□□□ -2.57
H2afb1S4R1E0 Gm23831-201ENSMUST00000158895 85 ntBASIC-1□□□□□ -2.57
H2afb1S4R1E0 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.01□□□□□ -2.57
H2afb1S4R1E0 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.01□□□□□ -2.57
H2afb1S4R1E0 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.01□□□□□ -2.57
H2afb1S4R1E0 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.02□□□□□ -2.57
H2afb1S4R1E0 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.02□□□□□ -2.57
H2afb1S4R1E0 Mir3101-201ENSMUST00000175607 88 ntBASIC-1.02□□□□□ -2.57
H2afb1S4R1E0 Gm23690-201ENSMUST00000083036 94 ntBASIC-1.03□□□□□ -2.57
H2afb1S4R1E0 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.04□□□□□ -2.58
H2afb1S4R1E0 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.04□□□□□ -2.58
H2afb1S4R1E0 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.04□□□□□ -2.58
H2afb1S4R1E0 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.05□□□□□ -2.58
H2afb1S4R1E0 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.05□□□□□ -2.58
H2afb1S4R1E0 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.05□□□□□ -2.58
H2afb1S4R1E0 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
H2afb1S4R1E0 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.07□□□□□ -2.58
H2afb1S4R1E0 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.07□□□□□ -2.58
H2afb1S4R1E0 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.08□□□□□ -2.58
H2afb1S4R1E0 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.08□□□□□ -2.58
H2afb1S4R1E0 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.08□□□□□ -2.58
H2afb1S4R1E0 Mir141-201ENSMUST00000083540 72 ntBASIC-1.08□□□□□ -2.58
H2afb1S4R1E0 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.09□□□□□ -2.58
H2afb1S4R1E0 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.09□□□□□ -2.58
H2afb1S4R1E0 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.1□□□□□ -2.59
H2afb1S4R1E0 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.1□□□□□ -2.59
H2afb1S4R1E0 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.11□□□□□ -2.59
H2afb1S4R1E0 Gm25772-201ENSMUST00000158574 56 ntBASIC-1.11□□□□□ -2.59
H2afb1S4R1E0 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.11□□□□□ -2.59
H2afb1S4R1E0 Snord49b-201ENSMUST00000082503 72 ntBASIC-1.11□□□□□ -2.59
H2afb1S4R1E0 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.11□□□□□ -2.59
H2afb1S4R1E0 Gm27884-201ENSMUST00000183865 76 ntBASIC-1.13□□□□□ -2.59
H2afb1S4R1E0 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.14□□□□□ -2.59
H2afb1S4R1E0 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.14□□□□□ -2.59
H2afb1S4R1E0 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.15□□□□□ -2.59
H2afb1S4R1E0 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-1.15□□□□□ -2.59
H2afb1S4R1E0 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 147.9 ms