Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm23345-201ENSMUST00000083817 150 ntBASIC-6,77□□□□□ -3,49
Smco4Q9JIS3 Gm22605-201ENSMUST00000158289 108 ntBASIC-6,79□□□□□ -3,5
Smco4Q9JIS3 Gm45492-201ENSMUST00000211611 288 ntBASIC-6,8□□□□□ -3,5
Smco4Q9JIS3 Gm22681-201ENSMUST00000083853 106 ntBASIC-6,8□□□□□ -3,5
Smco4Q9JIS3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-6,8□□□□□ -3,5
Smco4Q9JIS3 Gm22070-201ENSMUST00000178475 107 ntBASIC-6,82□□□□□ -3,5
Smco4Q9JIS3 Gm24131-201ENSMUST00000158539 107 ntBASIC-6,83□□□□□ -3,5
Smco4Q9JIS3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-6,83□□□□□ -3,5
Smco4Q9JIS3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-6,84□□□□□ -3,5
Smco4Q9JIS3 Gm25061-201ENSMUST00000104665 107 ntBASIC-6,85□□□□□ -3,51
Smco4Q9JIS3 AL935138.1-201ENSMUST00000215309 196 ntBASIC-6,86□□□□□ -3,51
Smco4Q9JIS3 Gm13339-201ENSMUST00000120651 510 ntBASIC-6,88□□□□□ -3,51
Smco4Q9JIS3 Gm22555-201ENSMUST00000157801 62 ntBASIC-6,88□□□□□ -3,51
Smco4Q9JIS3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-6,88□□□□□ -3,51
Smco4Q9JIS3 Gm24637-201ENSMUST00000158674 85 ntBASIC-6,9□□□□□ -3,51
Smco4Q9JIS3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-6,91□□□□□ -3,52
Smco4Q9JIS3 Gm28438-201ENSMUST00000188299 345 ntBASIC-6,91□□□□□ -3,52
Smco4Q9JIS3 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-6,91□□□□□ -3,52
Smco4Q9JIS3 Gm27317-201ENSMUST00000183533 95 ntBASIC-6,94□□□□□ -3,52
Smco4Q9JIS3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-6,95□□□□□ -3,52
Smco4Q9JIS3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-6,96□□□□□ -3,52
Smco4Q9JIS3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-6,96□□□□□ -3,52
Smco4Q9JIS3 Gm44373-201ENSMUST00000196112 169 ntBASIC-6,96□□□□□ -3,52
Smco4Q9JIS3 Gm38298-201ENSMUST00000193578 118 ntBASIC-6,98□□□□□ -3,53
Smco4Q9JIS3 Gm22965-201ENSMUST00000157958 101 ntBASIC-6,99□□□□□ -3,53
Smco4Q9JIS3 Gm28211-201ENSMUST00000190920 315 ntBASIC-7□□□□□ -3,53
Smco4Q9JIS3 Gm24297-201ENSMUST00000158300 68 ntBASIC-7,01□□□□□ -3,53
Smco4Q9JIS3 Gm24225-201ENSMUST00000158825 98 ntBASIC-7,01□□□□□ -3,53
Smco4Q9JIS3 Gm22775-201ENSMUST00000177630 120 ntBASIC-7,05□□□□□ -3,54
Smco4Q9JIS3 Gm23569-201ENSMUST00000180120 120 ntBASIC-7,05□□□□□ -3,54
Smco4Q9JIS3 Mir664-201ENSMUST00000196796 69 ntBASIC-7,05□□□□□ -3,54
Smco4Q9JIS3 Gm22973-201ENSMUST00000083298 191 ntBASIC-7,05□□□□□ -3,54
Smco4Q9JIS3 Gm25867-201ENSMUST00000158254 103 ntBASIC-7,06□□□□□ -3,54
Smco4Q9JIS3 AC238676.2-201ENSMUST00000220910 94 ntBASIC-7,06□□□□□ -3,54
Smco4Q9JIS3 Gm26425-201ENSMUST00000122529 82 ntBASIC-7,08□□□□□ -3,54
Smco4Q9JIS3 Gm22770-201ENSMUST00000158368 67 ntBASIC-7,09□□□□□ -3,54
Smco4Q9JIS3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-7,1□□□□□ -3,55
Smco4Q9JIS3 Gm22057-201ENSMUST00000083387 107 ntBASIC-7,1□□□□□ -3,55
Smco4Q9JIS3 Mir471-201ENSMUST00000093596 67 ntBASIC-7,1□□□□□ -3,55
Smco4Q9JIS3 Gm25681-201ENSMUST00000083938 106 ntBASIC-7,11□□□□□ -3,55
Smco4Q9JIS3 Gm26441-201ENSMUST00000082590 104 ntBASIC-7,12□□□□□ -3,55
Smco4Q9JIS3 Gm26008-201ENSMUST00000158797 99 ntBASIC-7,14□□□□□ -3,55
Smco4Q9JIS3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-7,15□□□□□ -3,55
Smco4Q9JIS3 Gm25599-201ENSMUST00000157816 103 ntBASIC-7,18□□□□□ -3,56
Smco4Q9JIS3 Gm23651-201ENSMUST00000116755 120 ntBASIC-7,19□□□□□ -3,56
Smco4Q9JIS3 Gm11333-201ENSMUST00000119479 148 ntBASIC-7,19□□□□□ -3,56
Smco4Q9JIS3 Gm24498-201ENSMUST00000158445 102 ntBASIC-7,2□□□□□ -3,56
Smco4Q9JIS3 Gm24259-201ENSMUST00000083740 107 ntBASIC-7,23□□□□□ -3,57
Smco4Q9JIS3 Gm25678-201ENSMUST00000174984 73 ntBASIC-7,25□□□□□ -3,57
Smco4Q9JIS3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-7,26□□□□□ -3,57
Smco4Q9JIS3 Mir466e-201ENSMUST00000198862 84 ntBASIC-7,26□□□□□ -3,57
Smco4Q9JIS3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-7,26□□□□□ -3,57
Smco4Q9JIS3 mt-Tt-201ENSMUST00000082422 67 ntBASIC-7,26□□□□□ -3,57
Smco4Q9JIS3 Gm24035-201ENSMUST00000082867 107 ntBASIC-7,29□□□□□ -3,58
Smco4Q9JIS3 Gm25542-201ENSMUST00000116889 94 ntBASIC-7,31□□□□□ -3,58
Smco4Q9JIS3 Gm24723-201ENSMUST00000158233 132 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-7,32□□□□□ -3,58
Smco4Q9JIS3 Gm23209-201ENSMUST00000158667 110 ntBASIC-7,34□□□□□ -3,58
Smco4Q9JIS3 Gm25482-201ENSMUST00000083225 107 ntBASIC-7,37□□□□□ -3,59
Smco4Q9JIS3 Gm23787-201ENSMUST00000122538 73 ntBASIC-7,38□□□□□ -3,59
Smco4Q9JIS3 Gm23369-201ENSMUST00000175406 105 ntBASIC-7,38□□□□□ -3,59
Smco4Q9JIS3 Gm23990-201ENSMUST00000117031 117 ntBASIC-7,39□□□□□ -3,59
Smco4Q9JIS3 Gm22879-201ENSMUST00000082895 74 ntBASIC-7,39□□□□□ -3,59
Smco4Q9JIS3 Gm24996-201ENSMUST00000158390 99 ntBASIC-7,4□□□□□ -3,59
Smco4Q9JIS3 Gm23059-201ENSMUST00000158978 107 ntBASIC-7,4□□□□□ -3,59
Smco4Q9JIS3 Gm25648-201ENSMUST00000177844 79 ntBASIC-7,41□□□□□ -3,6
Smco4Q9JIS3 Mir3064-201ENSMUST00000175532 67 ntBASIC-7,42□□□□□ -3,6
Smco4Q9JIS3 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-7,43□□□□□ -3,6
Smco4Q9JIS3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-7,43□□□□□ -3,6
Smco4Q9JIS3 CT571266.1-201ENSMUST00000222859 153 ntBASIC-7,44□□□□□ -3,6
Smco4Q9JIS3 Gm23468-201ENSMUST00000157125 108 ntBASIC-7,45□□□□□ -3,6
Smco4Q9JIS3 Gm22349-201ENSMUST00000157864 107 ntBASIC-7,46□□□□□ -3,6
Smco4Q9JIS3 Gm24797-201ENSMUST00000178103 107 ntBASIC-7,47□□□□□ -3,61
Smco4Q9JIS3 Gm26257-201ENSMUST00000122500 107 ntBASIC-7,48□□□□□ -3,61
Smco4Q9JIS3 mt-Tv-201ENSMUST00000082389 69 ntBASIC-7,49□□□□□ -3,61
Smco4Q9JIS3 Gm22491-201ENSMUST00000157190 102 ntBASIC-7,51□□□□□ -3,61
Smco4Q9JIS3 Gm22101-201ENSMUST00000157928 103 ntBASIC-7,54□□□□□ -3,62
Smco4Q9JIS3 Gm22925-201ENSMUST00000174956 102 ntBASIC-7,54□□□□□ -3,62
Smco4Q9JIS3 Gm23210-201ENSMUST00000158668 98 ntBASIC-7,57□□□□□ -3,62
Smco4Q9JIS3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-7,58□□□□□ -3,62
Smco4Q9JIS3 Gm43505-201ENSMUST00000200579 139 ntBASIC-7,58□□□□□ -3,62
Smco4Q9JIS3 Gm25740-201ENSMUST00000180247 107 ntBASIC-7,59□□□□□ -3,62
Smco4Q9JIS3 Gm27845-201ENSMUST00000184479 114 ntBASIC-7,63□□□□□ -3,63
Smco4Q9JIS3 Gm23258-201ENSMUST00000158319 106 ntBASIC-7,66□□□□□ -3,64
Smco4Q9JIS3 Gm27694-201ENSMUST00000184740 86 ntBASIC-7,66□□□□□ -3,64
Smco4Q9JIS3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-7,68□□□□□ -3,64
Smco4Q9JIS3 Gm23434-201ENSMUST00000157179 100 ntBASIC-7,69□□□□□ -3,64
Smco4Q9JIS3 Gm22080-201ENSMUST00000157591 106 ntBASIC-7,69□□□□□ -3,64
Smco4Q9JIS3 Gm23856-201ENSMUST00000158380 99 ntBASIC-7,69□□□□□ -3,64
Smco4Q9JIS3 Gm29107-201ENSMUST00000190910 347 ntBASIC-7,69□□□□□ -3,64
Smco4Q9JIS3 Gm22056-201ENSMUST00000083386 81 ntBASIC-7,7□□□□□ -3,64
Retrieved 100 of 76,532 protein–RNA pairs in 96,3 ms