Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.63□□□□□ -2.67
Vps28Q9D1C8 Mir702-201ENSMUST00000102285 109 ntBASIC-1.65□□□□□ -2.67
Vps28Q9D1C8 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.65□□□□□ -2.67
Vps28Q9D1C8 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.66□□□□□ -2.68
Vps28Q9D1C8 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.66□□□□□ -2.68
Vps28Q9D1C8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.67□□□□□ -2.68
Vps28Q9D1C8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.67□□□□□ -2.68
Vps28Q9D1C8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.68□□□□□ -2.68
Vps28Q9D1C8 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.68□□□□□ -2.68
Vps28Q9D1C8 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.69□□□□□ -2.68
Vps28Q9D1C8 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.69□□□□□ -2.68
Vps28Q9D1C8 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.72□□□□□ -2.68
Vps28Q9D1C8 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.76□□□□□ -2.69
Vps28Q9D1C8 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.77□□□□□ -2.69
Vps28Q9D1C8 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.78□□□□□ -2.69
Vps28Q9D1C8 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.8□□□□□ -2.7
Vps28Q9D1C8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.8□□□□□ -2.7
Vps28Q9D1C8 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.82□□□□□ -2.7
Vps28Q9D1C8 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.82□□□□□ -2.7
Vps28Q9D1C8 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.83□□□□□ -2.7
Vps28Q9D1C8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.83□□□□□ -2.7
Vps28Q9D1C8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.87□□□□□ -2.71
Vps28Q9D1C8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.87□□□□□ -2.71
Vps28Q9D1C8 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.9□□□□□ -2.71
Vps28Q9D1C8 Mir543-201ENSMUST00000102286 76 ntBASIC-1.93□□□□□ -2.72
Vps28Q9D1C8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
Vps28Q9D1C8 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.94□□□□□ -2.72
Vps28Q9D1C8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.94□□□□□ -2.72
Vps28Q9D1C8 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.98□□□□□ -2.73
Vps28Q9D1C8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Mir450b-201ENSMUST00000102095 82 ntBASIC-2□□□□□ -2.73
Vps28Q9D1C8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-2□□□□□ -2.73
Vps28Q9D1C8 Gm26262-201ENSMUST00000158024 127 ntBASIC-2□□□□□ -2.73
Vps28Q9D1C8 Gm23974-201ENSMUST00000083321 131 ntBASIC-2.01□□□□□ -2.73
Vps28Q9D1C8 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Gm22845-201ENSMUST00000157712 104 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Gm24725-201ENSMUST00000158229 125 ntBASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm24586-201ENSMUST00000116695 89 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Gm24482-201ENSMUST00000117005 93 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.09□□□□□ -2.74
Vps28Q9D1C8 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.09□□□□□ -2.74
Vps28Q9D1C8 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.1□□□□□ -2.75
Vps28Q9D1C8 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.11□□□□□ -2.75
Vps28Q9D1C8 Snord123-201ENSMUST00000158692 71 ntBASIC-2.12□□□□□ -2.75
Vps28Q9D1C8 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.13□□□□□ -2.75
Vps28Q9D1C8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.14□□□□□ -2.75
Vps28Q9D1C8 Gm44385-201ENSMUST00000198781 81 ntBASIC-2.15□□□□□ -2.75
Vps28Q9D1C8 Gm22251-201ENSMUST00000083216 107 ntBASIC-2.15□□□□□ -2.75
Vps28Q9D1C8 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.17□□□□□ -2.76
Vps28Q9D1C8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.17□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 202.5 ms