Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.63□□□□□ -2.67
Vps28Q9D1C8 Mir702-201ENSMUST00000102285 109 ntBASIC-1.65□□□□□ -2.67
Vps28Q9D1C8 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.65□□□□□ -2.67
Vps28Q9D1C8 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.66□□□□□ -2.68
Vps28Q9D1C8 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.66□□□□□ -2.68
Vps28Q9D1C8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.67□□□□□ -2.68
Vps28Q9D1C8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.67□□□□□ -2.68
Vps28Q9D1C8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.68□□□□□ -2.68
Vps28Q9D1C8 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.68□□□□□ -2.68
Vps28Q9D1C8 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.69□□□□□ -2.68
Vps28Q9D1C8 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.69□□□□□ -2.68
Vps28Q9D1C8 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.7□□□□□ -2.68
Vps28Q9D1C8 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.71□□□□□ -2.68
Vps28Q9D1C8 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.72□□□□□ -2.68
Vps28Q9D1C8 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.73□□□□□ -2.69
Vps28Q9D1C8 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.74□□□□□ -2.69
Vps28Q9D1C8 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.75□□□□□ -2.69
Vps28Q9D1C8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.76□□□□□ -2.69
Vps28Q9D1C8 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.77□□□□□ -2.69
Vps28Q9D1C8 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.78□□□□□ -2.69
Vps28Q9D1C8 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.79□□□□□ -2.7
Vps28Q9D1C8 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.8□□□□□ -2.7
Vps28Q9D1C8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.8□□□□□ -2.7
Vps28Q9D1C8 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.81□□□□□ -2.7
Vps28Q9D1C8 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.82□□□□□ -2.7
Vps28Q9D1C8 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.82□□□□□ -2.7
Vps28Q9D1C8 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.83□□□□□ -2.7
Vps28Q9D1C8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.83□□□□□ -2.7
Vps28Q9D1C8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.86□□□□□ -2.71
Vps28Q9D1C8 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.87□□□□□ -2.71
Vps28Q9D1C8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.87□□□□□ -2.71
Vps28Q9D1C8 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.88□□□□□ -2.71
Vps28Q9D1C8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.9□□□□□ -2.71
Vps28Q9D1C8 Mir543-201ENSMUST00000102286 76 ntBASIC-1.93□□□□□ -2.72
Vps28Q9D1C8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
Vps28Q9D1C8 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.94□□□□□ -2.72
Vps28Q9D1C8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.94□□□□□ -2.72
Vps28Q9D1C8 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.95□□□□□ -2.72
Vps28Q9D1C8 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.97□□□□□ -2.72
Vps28Q9D1C8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.98□□□□□ -2.73
Vps28Q9D1C8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.99□□□□□ -2.73
Vps28Q9D1C8 Mir450b-201ENSMUST00000102095 82 ntBASIC-2□□□□□ -2.73
Vps28Q9D1C8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-2□□□□□ -2.73
Vps28Q9D1C8 Gm26262-201ENSMUST00000158024 127 ntBASIC-2□□□□□ -2.73
Vps28Q9D1C8 Gm23974-201ENSMUST00000083321 131 ntBASIC-2.01□□□□□ -2.73
Vps28Q9D1C8 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.03□□□□□ -2.73
Vps28Q9D1C8 Gm22845-201ENSMUST00000157712 104 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.04□□□□□ -2.74
Vps28Q9D1C8 Gm24725-201ENSMUST00000158229 125 ntBASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.06□□□□□ -2.74
Vps28Q9D1C8 Gm24586-201ENSMUST00000116695 89 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Gm24482-201ENSMUST00000117005 93 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.08□□□□□ -2.74
Vps28Q9D1C8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.09□□□□□ -2.74
Vps28Q9D1C8 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.09□□□□□ -2.74
Vps28Q9D1C8 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.1□□□□□ -2.75
Vps28Q9D1C8 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.11□□□□□ -2.75
Vps28Q9D1C8 Snord123-201ENSMUST00000158692 71 ntBASIC-2.12□□□□□ -2.75
Vps28Q9D1C8 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.13□□□□□ -2.75
Vps28Q9D1C8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.14□□□□□ -2.75
Vps28Q9D1C8 Gm44385-201ENSMUST00000198781 81 ntBASIC-2.15□□□□□ -2.75
Vps28Q9D1C8 Gm22251-201ENSMUST00000083216 107 ntBASIC-2.15□□□□□ -2.75
Vps28Q9D1C8 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.17□□□□□ -2.76
Vps28Q9D1C8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.17□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms