Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm26052-201ENSMUST00000104646 84 ntBASIC0.12□□□□□ -2.39
Ssu72Q9CY97 Gm27784-201ENSMUST00000184926 113 ntBASIC0.11□□□□□ -2.39
Ssu72Q9CY97 Gm44375-201ENSMUST00000196657 150 ntBASIC0.11□□□□□ -2.39
Ssu72Q9CY97 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.11□□□□□ -2.39
Ssu72Q9CY97 Gm25158-201ENSMUST00000177681 121 ntBASIC0.1□□□□□ -2.39
Ssu72Q9CY97 Gm26229-201ENSMUST00000179699 121 ntBASIC0.1□□□□□ -2.39
Ssu72Q9CY97 Gm22088-201ENSMUST00000158341 117 ntBASIC0.09□□□□□ -2.4
Ssu72Q9CY97 Gm26210-201ENSMUST00000158680 91 ntBASIC0.09□□□□□ -2.4
Ssu72Q9CY97 Gm24508-201ENSMUST00000180104 107 ntBASIC0.09□□□□□ -2.4
Ssu72Q9CY97 Gm25524-201ENSMUST00000101821 107 ntBASIC0.08□□□□□ -2.4
Ssu72Q9CY97 Gm22474-201ENSMUST00000179407 107 ntBASIC0.08□□□□□ -2.4
Ssu72Q9CY97 Mir6896-201ENSMUST00000198033 73 ntBASIC0.08□□□□□ -2.4
Ssu72Q9CY97 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.08□□□□□ -2.4
Ssu72Q9CY97 Gm22368-201ENSMUST00000102416 109 ntBASIC0.07□□□□□ -2.4
Ssu72Q9CY97 Gm25510-201ENSMUST00000116986 123 ntBASIC0.07□□□□□ -2.4
Ssu72Q9CY97 Gm27607-201ENSMUST00000185162 122 ntBASIC0.07□□□□□ -2.4
Ssu72Q9CY97 Gm24377-201ENSMUST00000104398 131 ntBASIC0.06□□□□□ -2.4
Ssu72Q9CY97 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.05□□□□□ -2.4
Ssu72Q9CY97 Gm25703-201ENSMUST00000083123 151 ntBASIC0.05□□□□□ -2.4
Ssu72Q9CY97 Mir1948-201ENSMUST00000157325 85 ntBASIC0.04□□□□□ -2.4
Ssu72Q9CY97 Gm23994-201ENSMUST00000158059 88 ntBASIC0.04□□□□□ -2.4
Ssu72Q9CY97 Mir702-201ENSMUST00000102285 109 ntBASIC0.03□□□□□ -2.4
Ssu72Q9CY97 Mir669f-201ENSMUST00000103850 121 ntBASIC0.03□□□□□ -2.4
Ssu72Q9CY97 Gm22335-201ENSMUST00000157724 99 ntBASIC0.02□□□□□ -2.41
Ssu72Q9CY97 Mir3089-201ENSMUST00000175350 84 ntBASIC0.02□□□□□ -2.41
Ssu72Q9CY97 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.02□□□□□ -2.41
Ssu72Q9CY97 Snord42b-201ENSMUST00000083742 69 ntBASIC0.02□□□□□ -2.41
Ssu72Q9CY97 Gm23278-201ENSMUST00000157911 143 ntBASIC0.01□□□□□ -2.41
Ssu72Q9CY97 Gm25222-201ENSMUST00000158199 126 ntBASIC0□□□□□ -2.41
Ssu72Q9CY97 Mir382-201ENSMUST00000083494 76 ntBASIC0□□□□□ -2.41
Ssu72Q9CY97 Gm23961-201ENSMUST00000104685 97 ntBASIC-0.01□□□□□ -2.41
Ssu72Q9CY97 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.01□□□□□ -2.41
Ssu72Q9CY97 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.02□□□□□ -2.41
Ssu72Q9CY97 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Ssu72Q9CY97 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.02□□□□□ -2.41
Ssu72Q9CY97 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.04□□□□□ -2.42
Ssu72Q9CY97 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.04□□□□□ -2.42
Ssu72Q9CY97 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Ssu72Q9CY97 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.05□□□□□ -2.42
Ssu72Q9CY97 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.05□□□□□ -2.42
Ssu72Q9CY97 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.06□□□□□ -2.42
Ssu72Q9CY97 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.06□□□□□ -2.42
Ssu72Q9CY97 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.07□□□□□ -2.42
Ssu72Q9CY97 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.07□□□□□ -2.42
Ssu72Q9CY97 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.07□□□□□ -2.42
Ssu72Q9CY97 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.08□□□□□ -2.42
Ssu72Q9CY97 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.08□□□□□ -2.42
Ssu72Q9CY97 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.08□□□□□ -2.42
Ssu72Q9CY97 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.09□□□□□ -2.42
Ssu72Q9CY97 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.1□□□□□ -2.43
Ssu72Q9CY97 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Ssu72Q9CY97 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.1□□□□□ -2.43
Ssu72Q9CY97 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.1□□□□□ -2.43
Ssu72Q9CY97 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.12□□□□□ -2.43
Ssu72Q9CY97 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.13□□□□□ -2.43
Ssu72Q9CY97 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.14□□□□□ -2.43
Ssu72Q9CY97 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.14□□□□□ -2.43
Ssu72Q9CY97 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.15□□□□□ -2.43
Ssu72Q9CY97 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.15□□□□□ -2.43
Ssu72Q9CY97 Mir672-201ENSMUST00000102331 100 ntBASIC-0.16□□□□□ -2.44
Ssu72Q9CY97 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.16□□□□□ -2.44
Ssu72Q9CY97 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.16□□□□□ -2.44
Ssu72Q9CY97 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.17□□□□□ -2.44
Ssu72Q9CY97 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.17□□□□□ -2.44
Ssu72Q9CY97 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Ssu72Q9CY97 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
Ssu72Q9CY97 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.19□□□□□ -2.44
Ssu72Q9CY97 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.19□□□□□ -2.44
Ssu72Q9CY97 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.2□□□□□ -2.44
Ssu72Q9CY97 Mir141-201ENSMUST00000083540 72 ntBASIC-0.2□□□□□ -2.44
Ssu72Q9CY97 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.21□□□□□ -2.44
Ssu72Q9CY97 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.23□□□□□ -2.45
Ssu72Q9CY97 Mir191-201ENSMUST00000196210 74 ntBASIC-0.23□□□□□ -2.45
Ssu72Q9CY97 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.24□□□□□ -2.45
Ssu72Q9CY97 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.24□□□□□ -2.45
Ssu72Q9CY97 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.24□□□□□ -2.45
Ssu72Q9CY97 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.25□□□□□ -2.45
Ssu72Q9CY97 Mir214-201ENSMUST00000083582 110 ntBASIC-0.25□□□□□ -2.45
Ssu72Q9CY97 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.26□□□□□ -2.45
Ssu72Q9CY97 Gm26259-201ENSMUST00000104778 97 ntBASIC-0.26□□□□□ -2.45
Ssu72Q9CY97 Mir1955-201ENSMUST00000158014 98 ntBASIC-0.26□□□□□ -2.45
Ssu72Q9CY97 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.28□□□□□ -2.45
Ssu72Q9CY97 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.28□□□□□ -2.45
Ssu72Q9CY97 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.3□□□□□ -2.46
Ssu72Q9CY97 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.3□□□□□ -2.46
Ssu72Q9CY97 Mir136-201ENSMUST00000199494 62 ntBASIC-0.3□□□□□ -2.46
Ssu72Q9CY97 AC160976.1-201ENSMUST00000215092 148 ntBASIC-0.3□□□□□ -2.46
Ssu72Q9CY97 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.31□□□□□ -2.46
Ssu72Q9CY97 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Ssu72Q9CY97 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.33□□□□□ -2.46
Ssu72Q9CY97 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.33□□□□□ -2.46
Ssu72Q9CY97 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.34□□□□□ -2.46
Ssu72Q9CY97 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.35□□□□□ -2.47
Ssu72Q9CY97 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
Ssu72Q9CY97 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms