Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.22□□□□□ -2.6
Smc1aQ9CU62 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.22□□□□□ -2.6
Smc1aQ9CU62 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.22□□□□□ -2.6
Smc1aQ9CU62 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.23□□□□□ -2.61
Smc1aQ9CU62 Mir543-201ENSMUST00000102286 76 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.24□□□□□ -2.61
Smc1aQ9CU62 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.25□□□□□ -2.61
Smc1aQ9CU62 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Snord57-201ENSMUST00000083338 72 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.28□□□□□ -2.61
Smc1aQ9CU62 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.29□□□□□ -2.62
Smc1aQ9CU62 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.29□□□□□ -2.62
Smc1aQ9CU62 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.29□□□□□ -2.62
Smc1aQ9CU62 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.31□□□□□ -2.62
Smc1aQ9CU62 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.31□□□□□ -2.62
Smc1aQ9CU62 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.31□□□□□ -2.62
Smc1aQ9CU62 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.33□□□□□ -2.62
Smc1aQ9CU62 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.33□□□□□ -2.62
Smc1aQ9CU62 Mir876-201ENSMUST00000104659 81 ntBASIC-1.34□□□□□ -2.62
Smc1aQ9CU62 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.34□□□□□ -2.62
Smc1aQ9CU62 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.34□□□□□ -2.62
Smc1aQ9CU62 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.35□□□□□ -2.63
Smc1aQ9CU62 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.35□□□□□ -2.63
Smc1aQ9CU62 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.35□□□□□ -2.63
Smc1aQ9CU62 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.35□□□□□ -2.63
Smc1aQ9CU62 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.36□□□□□ -2.63
Smc1aQ9CU62 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.36□□□□□ -2.63
Smc1aQ9CU62 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.37□□□□□ -2.63
Smc1aQ9CU62 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.37□□□□□ -2.63
Smc1aQ9CU62 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.37□□□□□ -2.63
Smc1aQ9CU62 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.38□□□□□ -2.63
Smc1aQ9CU62 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.38□□□□□ -2.63
Smc1aQ9CU62 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.38□□□□□ -2.63
Smc1aQ9CU62 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.39□□□□□ -2.63
Smc1aQ9CU62 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.39□□□□□ -2.63
Smc1aQ9CU62 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.39□□□□□ -2.63
Smc1aQ9CU62 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.4□□□□□ -2.63
Smc1aQ9CU62 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.4□□□□□ -2.63
Smc1aQ9CU62 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.41□□□□□ -2.64
Smc1aQ9CU62 Mir494-201ENSMUST00000093632 85 ntBASIC-1.41□□□□□ -2.64
Smc1aQ9CU62 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.42□□□□□ -2.64
Smc1aQ9CU62 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Smc1aQ9CU62 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.43□□□□□ -2.64
Smc1aQ9CU62 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.43□□□□□ -2.64
Smc1aQ9CU62 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.44□□□□□ -2.64
Smc1aQ9CU62 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.44□□□□□ -2.64
Smc1aQ9CU62 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.45□□□□□ -2.64
Smc1aQ9CU62 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.45□□□□□ -2.64
Smc1aQ9CU62 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Smc1aQ9CU62 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.45□□□□□ -2.64
Smc1aQ9CU62 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.46□□□□□ -2.64
Smc1aQ9CU62 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.46□□□□□ -2.64
Smc1aQ9CU62 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.46□□□□□ -2.64
Smc1aQ9CU62 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.47□□□□□ -2.64
Smc1aQ9CU62 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.47□□□□□ -2.64
Smc1aQ9CU62 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.48□□□□□ -2.65
Smc1aQ9CU62 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.48□□□□□ -2.65
Smc1aQ9CU62 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.48□□□□□ -2.65
Smc1aQ9CU62 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.49□□□□□ -2.65
Smc1aQ9CU62 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.49□□□□□ -2.65
Smc1aQ9CU62 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.5□□□□□ -2.65
Smc1aQ9CU62 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
Smc1aQ9CU62 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
Smc1aQ9CU62 Mir122-201ENSMUST00000083468 66 ntBASIC-1.52□□□□□ -2.65
Smc1aQ9CU62 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
Smc1aQ9CU62 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.53□□□□□ -2.65
Smc1aQ9CU62 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.53□□□□□ -2.65
Smc1aQ9CU62 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.53□□□□□ -2.65
Smc1aQ9CU62 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
Smc1aQ9CU62 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.56□□□□□ -2.66
Smc1aQ9CU62 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.58□□□□□ -2.66
Smc1aQ9CU62 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.58□□□□□ -2.66
Smc1aQ9CU62 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.58□□□□□ -2.66
Smc1aQ9CU62 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.58□□□□□ -2.66
Smc1aQ9CU62 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.59□□□□□ -2.66
Smc1aQ9CU62 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.59□□□□□ -2.66
Smc1aQ9CU62 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.59□□□□□ -2.66
Smc1aQ9CU62 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms