Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm26284-201ENSMUST00000180107 79 ntBASIC-2.35□□□□□ -2.79
Ccdc43Q9CR29 Gm24570-201ENSMUST00000180314 79 ntBASIC-2.35□□□□□ -2.79
Ccdc43Q9CR29 Gm24654-201ENSMUST00000180315 79 ntBASIC-2.35□□□□□ -2.79
Ccdc43Q9CR29 Gm23138-201ENSMUST00000083365 103 ntBASIC-2.35□□□□□ -2.79
Ccdc43Q9CR29 Gm24946-201ENSMUST00000158332 106 ntBASIC-2.36□□□□□ -2.79
Ccdc43Q9CR29 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-2.36□□□□□ -2.79
Ccdc43Q9CR29 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.37□□□□□ -2.79
Ccdc43Q9CR29 Gm23468-201ENSMUST00000157125 108 ntBASIC-2.38□□□□□ -2.79
Ccdc43Q9CR29 Gm22286-201ENSMUST00000179708 107 ntBASIC-2.38□□□□□ -2.79
Ccdc43Q9CR29 Mir876-201ENSMUST00000104659 81 ntBASIC-2.39□□□□□ -2.79
Ccdc43Q9CR29 Gm22430-201ENSMUST00000158546 107 ntBASIC-2.4□□□□□ -2.79
Ccdc43Q9CR29 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.4□□□□□ -2.79
Ccdc43Q9CR29 Gm22004-201ENSMUST00000101884 107 ntBASIC-2.41□□□□□ -2.8
Ccdc43Q9CR29 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.41□□□□□ -2.8
Ccdc43Q9CR29 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.41□□□□□ -2.8
Ccdc43Q9CR29 Gm24676-201ENSMUST00000158758 75 ntBASIC-2.41□□□□□ -2.8
Ccdc43Q9CR29 Gm23306-201ENSMUST00000179058 105 ntBASIC-2.41□□□□□ -2.8
Ccdc43Q9CR29 Gm25429-201ENSMUST00000157607 132 ntBASIC-2.44□□□□□ -2.8
Ccdc43Q9CR29 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.45□□□□□ -2.8
Ccdc43Q9CR29 Gm24650-201ENSMUST00000157105 103 ntBASIC-2.46□□□□□ -2.8
Ccdc43Q9CR29 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.46□□□□□ -2.8
Ccdc43Q9CR29 Mir7231-201ENSMUST00000196252 61 ntBASIC-2.46□□□□□ -2.8
Ccdc43Q9CR29 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.46□□□□□ -2.8
Ccdc43Q9CR29 Gm25542-201ENSMUST00000116889 94 ntBASIC-2.47□□□□□ -2.8
Ccdc43Q9CR29 Gm25862-201ENSMUST00000158250 129 ntBASIC-2.47□□□□□ -2.8
Ccdc43Q9CR29 Gm26491-201ENSMUST00000179268 121 ntBASIC-2.48□□□□□ -2.81
Ccdc43Q9CR29 Gm22458-201ENSMUST00000082576 107 ntBASIC-2.48□□□□□ -2.81
Ccdc43Q9CR29 Mir15b-201ENSMUST00000083646 64 ntBASIC-2.48□□□□□ -2.81
Ccdc43Q9CR29 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.49□□□□□ -2.81
Ccdc43Q9CR29 Gm22446-201ENSMUST00000180108 104 ntBASIC-2.49□□□□□ -2.81
Ccdc43Q9CR29 Gm23578-201ENSMUST00000103943 104 ntBASIC-2.5□□□□□ -2.81
Ccdc43Q9CR29 Mir3083-201ENSMUST00000175377 64 ntBASIC-2.5□□□□□ -2.81
Ccdc43Q9CR29 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-2.5□□□□□ -2.81
Ccdc43Q9CR29 Gm25812-201ENSMUST00000082751 103 ntBASIC-2.5□□□□□ -2.81
Ccdc43Q9CR29 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
Ccdc43Q9CR29 AL929417.1-201ENSMUST00000214901 124 ntBASIC-2.52□□□□□ -2.81
Ccdc43Q9CR29 CT030170.1-201ENSMUST00000222183 148 ntBASIC-2.52□□□□□ -2.81
Ccdc43Q9CR29 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.52□□□□□ -2.81
Ccdc43Q9CR29 Gm23350-201ENSMUST00000158429 103 ntBASIC-2.54□□□□□ -2.82
Ccdc43Q9CR29 Gm25854-201ENSMUST00000082792 72 ntBASIC-2.54□□□□□ -2.82
Ccdc43Q9CR29 Mir494-201ENSMUST00000093632 85 ntBASIC-2.54□□□□□ -2.82
Ccdc43Q9CR29 Gm25289-201ENSMUST00000122799 119 ntBASIC-2.55□□□□□ -2.82
Ccdc43Q9CR29 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.55□□□□□ -2.82
Ccdc43Q9CR29 Gm24492-201ENSMUST00000083798 107 ntBASIC-2.56□□□□□ -2.82
Ccdc43Q9CR29 Gm11333-201ENSMUST00000119479 148 ntBASIC-2.57□□□□□ -2.82
Ccdc43Q9CR29 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.57□□□□□ -2.82
Ccdc43Q9CR29 Gm25644-201ENSMUST00000083209 107 ntBASIC-2.57□□□□□ -2.82
Ccdc43Q9CR29 Gm25740-201ENSMUST00000180247 107 ntBASIC-2.58□□□□□ -2.82
Ccdc43Q9CR29 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.58□□□□□ -2.82
Ccdc43Q9CR29 Gm22197-201ENSMUST00000116866 58 ntBASIC-2.6□□□□□ -2.83
Ccdc43Q9CR29 Gm24705-201ENSMUST00000082808 107 ntBASIC-2.6□□□□□ -2.83
Ccdc43Q9CR29 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.6□□□□□ -2.83
Ccdc43Q9CR29 Gm23244-201ENSMUST00000083375 92 ntBASIC-2.6□□□□□ -2.83
Ccdc43Q9CR29 Gm24167-201ENSMUST00000177733 124 ntBASIC-2.61□□□□□ -2.83
Ccdc43Q9CR29 Gm24028-201ENSMUST00000178991 124 ntBASIC-2.61□□□□□ -2.83
Ccdc43Q9CR29 Gm23966-201ENSMUST00000179823 107 ntBASIC-2.61□□□□□ -2.83
Ccdc43Q9CR29 Gm24725-201ENSMUST00000158229 125 ntBASIC-2.62□□□□□ -2.83
Ccdc43Q9CR29 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-2.64□□□□□ -2.83
Ccdc43Q9CR29 Gm24988-201ENSMUST00000104460 121 ntBASIC-2.64□□□□□ -2.83
Ccdc43Q9CR29 Gm2077-201ENSMUST00000195017 319 ntBASIC-2.64□□□□□ -2.83
Ccdc43Q9CR29 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.65□□□□□ -2.83
Ccdc43Q9CR29 Gm25061-201ENSMUST00000104665 107 ntBASIC-2.66□□□□□ -2.84
Ccdc43Q9CR29 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.67□□□□□ -2.84
Ccdc43Q9CR29 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.67□□□□□ -2.84
Ccdc43Q9CR29 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.68□□□□□ -2.84
Ccdc43Q9CR29 AC160962.3-201ENSMUST00000225914 112 ntBASIC-2.69□□□□□ -2.84
Ccdc43Q9CR29 AC161271.1-201ENSMUST00000226914 150 ntBASIC-2.69□□□□□ -2.84
Ccdc43Q9CR29 Gm26375-201ENSMUST00000101829 106 ntBASIC-2.71□□□□□ -2.84
Ccdc43Q9CR29 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
Ccdc43Q9CR29 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.72□□□□□ -2.84
Ccdc43Q9CR29 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.73□□□□□ -2.85
Ccdc43Q9CR29 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.73□□□□□ -2.85
Ccdc43Q9CR29 Gm23570-201ENSMUST00000083029 104 ntBASIC-2.73□□□□□ -2.85
Ccdc43Q9CR29 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.74□□□□□ -2.85
Ccdc43Q9CR29 Gm25087-201ENSMUST00000101992 78 ntBASIC-2.75□□□□□ -2.85
Ccdc43Q9CR29 Mir367-201ENSMUST00000083479 75 ntBASIC-2.75□□□□□ -2.85
Ccdc43Q9CR29 Gm22354-201ENSMUST00000083919 70 ntBASIC-2.75□□□□□ -2.85
Ccdc43Q9CR29 Gm26467-201ENSMUST00000097257 78 ntBASIC-2.75□□□□□ -2.85
Ccdc43Q9CR29 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.77□□□□□ -2.85
Ccdc43Q9CR29 Gm20734-201ENSMUST00000216939 193 ntBASIC-2.78□□□□□ -2.85
Ccdc43Q9CR29 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm25380-201ENSMUST00000175463 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm24641-201ENSMUST00000178055 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm25484-201ENSMUST00000178217 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm26138-201ENSMUST00000179236 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm22821-201ENSMUST00000179288 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm23298-201ENSMUST00000083181 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm22057-201ENSMUST00000083387 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Gm25516-201ENSMUST00000083857 107 ntBASIC-2.79□□□□□ -2.86
Ccdc43Q9CR29 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.8□□□□□ -2.86
Ccdc43Q9CR29 Gm23644-201ENSMUST00000157856 77 ntBASIC-2.82□□□□□ -2.86
Ccdc43Q9CR29 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.82□□□□□ -2.86
Ccdc43Q9CR29 Mir122-201ENSMUST00000083468 66 ntBASIC-2.82□□□□□ -2.86
Ccdc43Q9CR29 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.83□□□□□ -2.86
Ccdc43Q9CR29 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.83□□□□□ -2.86
Ccdc43Q9CR29 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.84□□□□□ -2.86
Ccdc43Q9CR29 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.84□□□□□ -2.86
Ccdc43Q9CR29 Gm23678-201ENSMUST00000083157 107 ntBASIC-2.84□□□□□ -2.86
Ccdc43Q9CR29 Gm22213-201ENSMUST00000157564 119 ntBASIC-2.85□□□□□ -2.87
Ccdc43Q9CR29 Gm25326-201ENSMUST00000101903 107 ntBASIC-2.87□□□□□ -2.87
Retrieved 100 of 76,532 protein–RNA pairs in 236.7 ms