Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
RTRAFQ9CQE8 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.83□□□□□ -2.7
RTRAFQ9CQE8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.84□□□□□ -2.7
RTRAFQ9CQE8 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.84□□□□□ -2.7
RTRAFQ9CQE8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.86□□□□□ -2.71
RTRAFQ9CQE8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Mir494-201ENSMUST00000093632 85 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.9□□□□□ -2.71
RTRAFQ9CQE8 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.9□□□□□ -2.71
RTRAFQ9CQE8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.91□□□□□ -2.72
RTRAFQ9CQE8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.92□□□□□ -2.72
RTRAFQ9CQE8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.93□□□□□ -2.72
RTRAFQ9CQE8 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.94□□□□□ -2.72
RTRAFQ9CQE8 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.95□□□□□ -2.72
RTRAFQ9CQE8 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.95□□□□□ -2.72
RTRAFQ9CQE8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm22016-201ENSMUST00000158793 114 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm24197-201ENSMUST00000175085 109 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm24091-201ENSMUST00000082550 83 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm23711-201ENSMUST00000083856 83 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.01□□□□□ -2.73
RTRAFQ9CQE8 Gm23570-201ENSMUST00000083029 104 ntBASIC-2.01□□□□□ -2.73
RTRAFQ9CQE8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
RTRAFQ9CQE8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
RTRAFQ9CQE8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.03□□□□□ -2.73
RTRAFQ9CQE8 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.03□□□□□ -2.73
RTRAFQ9CQE8 Gm26375-201ENSMUST00000101829 106 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm24459-201ENSMUST00000082730 86 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm20734-201ENSMUST00000216939 193 ntBASIC-2.07□□□□□ -2.74
RTRAFQ9CQE8 Gm25326-201ENSMUST00000101903 107 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm23573-201ENSMUST00000104408 107 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm23644-201ENSMUST00000157856 77 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Mir367-201ENSMUST00000083479 75 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm22213-201ENSMUST00000157564 119 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25380-201ENSMUST00000175463 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm24641-201ENSMUST00000178055 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25484-201ENSMUST00000178217 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm26138-201ENSMUST00000179236 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22821-201ENSMUST00000179288 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm23298-201ENSMUST00000083181 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22057-201ENSMUST00000083387 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25516-201ENSMUST00000083857 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22842-201ENSMUST00000157709 118 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm24203-201ENSMUST00000082949 114 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm23678-201ENSMUST00000083157 107 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm24605-201ENSMUST00000104772 96 ntBASIC-2.13□□□□□ -2.75
RTRAFQ9CQE8 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.15□□□□□ -2.75
RTRAFQ9CQE8 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.16□□□□□ -2.76
RTRAFQ9CQE8 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.17□□□□□ -2.76
RTRAFQ9CQE8 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.17□□□□□ -2.76
RTRAFQ9CQE8 Gm23856-201ENSMUST00000158380 99 ntBASIC-2.18□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms