Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.07□□□□□ -2.42
Rpa1Q8VEE4 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.08□□□□□ -2.42
Rpa1Q8VEE4 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.08□□□□□ -2.42
Rpa1Q8VEE4 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.08□□□□□ -2.42
Rpa1Q8VEE4 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.08□□□□□ -2.42
Rpa1Q8VEE4 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.09□□□□□ -2.42
Rpa1Q8VEE4 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.09□□□□□ -2.42
Rpa1Q8VEE4 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.1□□□□□ -2.43
Rpa1Q8VEE4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Rpa1Q8VEE4 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.11□□□□□ -2.43
Rpa1Q8VEE4 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.11□□□□□ -2.43
Rpa1Q8VEE4 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.11□□□□□ -2.43
Rpa1Q8VEE4 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.12□□□□□ -2.43
Rpa1Q8VEE4 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.12□□□□□ -2.43
Rpa1Q8VEE4 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.12□□□□□ -2.43
Rpa1Q8VEE4 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.12□□□□□ -2.43
Rpa1Q8VEE4 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.12□□□□□ -2.43
Rpa1Q8VEE4 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.14□□□□□ -2.43
Rpa1Q8VEE4 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.14□□□□□ -2.43
Rpa1Q8VEE4 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.15□□□□□ -2.43
Rpa1Q8VEE4 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.15□□□□□ -2.43
Rpa1Q8VEE4 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Mir191-201ENSMUST00000196210 74 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.16□□□□□ -2.44
Rpa1Q8VEE4 Gm25524-201ENSMUST00000101821 107 ntBASIC-0.17□□□□□ -2.44
Rpa1Q8VEE4 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Rpa1Q8VEE4 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.17□□□□□ -2.44
Rpa1Q8VEE4 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.17□□□□□ -2.44
Rpa1Q8VEE4 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.17□□□□□ -2.44
Rpa1Q8VEE4 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.18□□□□□ -2.44
Rpa1Q8VEE4 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.18□□□□□ -2.44
Rpa1Q8VEE4 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.18□□□□□ -2.44
Rpa1Q8VEE4 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.18□□□□□ -2.44
Rpa1Q8VEE4 Gm22401-201ENSMUST00000174927 117 ntBASIC-0.19□□□□□ -2.44
Rpa1Q8VEE4 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.2□□□□□ -2.44
Rpa1Q8VEE4 Mir702-201ENSMUST00000102285 109 ntBASIC-0.22□□□□□ -2.44
Rpa1Q8VEE4 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.22□□□□□ -2.44
Rpa1Q8VEE4 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.22□□□□□ -2.44
Rpa1Q8VEE4 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.23□□□□□ -2.45
Rpa1Q8VEE4 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.23□□□□□ -2.45
Rpa1Q8VEE4 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.23□□□□□ -2.45
Rpa1Q8VEE4 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.24□□□□□ -2.45
Rpa1Q8VEE4 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.24□□□□□ -2.45
Rpa1Q8VEE4 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.24□□□□□ -2.45
Rpa1Q8VEE4 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.25□□□□□ -2.45
Rpa1Q8VEE4 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.25□□□□□ -2.45
Rpa1Q8VEE4 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.25□□□□□ -2.45
Rpa1Q8VEE4 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.25□□□□□ -2.45
Rpa1Q8VEE4 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.26□□□□□ -2.45
Rpa1Q8VEE4 Mir214-201ENSMUST00000083582 110 ntBASIC-0.26□□□□□ -2.45
Rpa1Q8VEE4 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.27□□□□□ -2.45
Rpa1Q8VEE4 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.27□□□□□ -2.45
Rpa1Q8VEE4 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.3□□□□□ -2.46
Rpa1Q8VEE4 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.3□□□□□ -2.46
Rpa1Q8VEE4 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.31□□□□□ -2.46
Rpa1Q8VEE4 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.31□□□□□ -2.46
Rpa1Q8VEE4 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.31□□□□□ -2.46
Rpa1Q8VEE4 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.31□□□□□ -2.46
Rpa1Q8VEE4 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.31□□□□□ -2.46
Rpa1Q8VEE4 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.32□□□□□ -2.46
Rpa1Q8VEE4 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.34□□□□□ -2.46
Rpa1Q8VEE4 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.34□□□□□ -2.46
Rpa1Q8VEE4 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.35□□□□□ -2.47
Rpa1Q8VEE4 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.35□□□□□ -2.47
Rpa1Q8VEE4 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.35□□□□□ -2.47
Rpa1Q8VEE4 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.35□□□□□ -2.47
Rpa1Q8VEE4 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.35□□□□□ -2.47
Rpa1Q8VEE4 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.36□□□□□ -2.47
Rpa1Q8VEE4 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.37□□□□□ -2.47
Rpa1Q8VEE4 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Rpa1Q8VEE4 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.38□□□□□ -2.47
Rpa1Q8VEE4 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.38□□□□□ -2.47
Rpa1Q8VEE4 Gm25705-201ENSMUST00000083119 104 ntBASIC-0.38□□□□□ -2.47
Rpa1Q8VEE4 Mir141-201ENSMUST00000083540 72 ntBASIC-0.38□□□□□ -2.47
Rpa1Q8VEE4 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.4□□□□□ -2.47
Rpa1Q8VEE4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.4□□□□□ -2.47
Rpa1Q8VEE4 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.4□□□□□ -2.47
Rpa1Q8VEE4 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.4□□□□□ -2.47
Rpa1Q8VEE4 Mir136-201ENSMUST00000199494 62 ntBASIC-0.41□□□□□ -2.48
Rpa1Q8VEE4 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.42□□□□□ -2.48
Rpa1Q8VEE4 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.42□□□□□ -2.48
Rpa1Q8VEE4 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.45□□□□□ -2.48
Rpa1Q8VEE4 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.45□□□□□ -2.48
Rpa1Q8VEE4 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.46□□□□□ -2.48
Rpa1Q8VEE4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.47□□□□□ -2.48
Rpa1Q8VEE4 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.49□□□□□ -2.49
Rpa1Q8VEE4 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.49□□□□□ -2.49
Rpa1Q8VEE4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.5□□□□□ -2.49
Rpa1Q8VEE4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.5□□□□□ -2.49
Rpa1Q8VEE4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.52□□□□□ -2.49
Rpa1Q8VEE4 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.53□□□□□ -2.49
Rpa1Q8VEE4 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.53□□□□□ -2.49
Rpa1Q8VEE4 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.53□□□□□ -2.49
Rpa1Q8VEE4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
Rpa1Q8VEE4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.54□□□□□ -2.5
Rpa1Q8VEE4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.55□□□□□ -2.5
Rpa1Q8VEE4 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 174.8 ms