Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.79□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.8□□□□□ -2.7
Ccdc28aQ8CEI3 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.81□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.81□□□□□ -2.7
Ccdc28aQ8CEI3 Gm24683-201ENSMUST00000104840 88 ntBASIC-1.83□□□□□ -2.7
Ccdc28aQ8CEI3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-1.83□□□□□ -2.7
Ccdc28aQ8CEI3 Mir6481-201ENSMUST00000184617 110 ntBASIC-1.83□□□□□ -2.7
Ccdc28aQ8CEI3 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.84□□□□□ -2.7
Ccdc28aQ8CEI3 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.84□□□□□ -2.7
Ccdc28aQ8CEI3 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.84□□□□□ -2.7
Ccdc28aQ8CEI3 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.84□□□□□ -2.7
Ccdc28aQ8CEI3 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.85□□□□□ -2.71
Ccdc28aQ8CEI3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.85□□□□□ -2.71
Ccdc28aQ8CEI3 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.85□□□□□ -2.71
Ccdc28aQ8CEI3 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.86□□□□□ -2.71
Ccdc28aQ8CEI3 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.86□□□□□ -2.71
Ccdc28aQ8CEI3 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.87□□□□□ -2.71
Ccdc28aQ8CEI3 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.88□□□□□ -2.71
Ccdc28aQ8CEI3 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.88□□□□□ -2.71
Ccdc28aQ8CEI3 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.88□□□□□ -2.71
Ccdc28aQ8CEI3 Mir367-201ENSMUST00000083479 75 ntBASIC-1.88□□□□□ -2.71
Ccdc28aQ8CEI3 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.89□□□□□ -2.71
Ccdc28aQ8CEI3 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.89□□□□□ -2.71
Ccdc28aQ8CEI3 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.89□□□□□ -2.71
Ccdc28aQ8CEI3 Mir7116-201ENSMUST00000195956 70 ntBASIC-1.9□□□□□ -2.71
Ccdc28aQ8CEI3 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.91□□□□□ -2.72
Ccdc28aQ8CEI3 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.91□□□□□ -2.72
Ccdc28aQ8CEI3 Gm44353-201ENSMUST00000200618 138 ntBASIC-1.91□□□□□ -2.72
Ccdc28aQ8CEI3 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.91□□□□□ -2.72
Ccdc28aQ8CEI3 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.91□□□□□ -2.72
Ccdc28aQ8CEI3 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.92□□□□□ -2.72
Ccdc28aQ8CEI3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
Ccdc28aQ8CEI3 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.93□□□□□ -2.72
Ccdc28aQ8CEI3 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.93□□□□□ -2.72
Ccdc28aQ8CEI3 Gm24590-201ENSMUST00000116699 119 ntBASIC-1.94□□□□□ -2.72
Ccdc28aQ8CEI3 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.94□□□□□ -2.72
Ccdc28aQ8CEI3 Gm25812-201ENSMUST00000082751 103 ntBASIC-1.94□□□□□ -2.72
Ccdc28aQ8CEI3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Mir122-201ENSMUST00000083468 66 ntBASIC-1.95□□□□□ -2.72
Ccdc28aQ8CEI3 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.96□□□□□ -2.72
Ccdc28aQ8CEI3 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.96□□□□□ -2.72
Ccdc28aQ8CEI3 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.96□□□□□ -2.72
Ccdc28aQ8CEI3 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.97□□□□□ -2.72
Ccdc28aQ8CEI3 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.97□□□□□ -2.72
Ccdc28aQ8CEI3 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.98□□□□□ -2.73
Ccdc28aQ8CEI3 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.98□□□□□ -2.73
Ccdc28aQ8CEI3 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.99□□□□□ -2.73
Ccdc28aQ8CEI3 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.99□□□□□ -2.73
Ccdc28aQ8CEI3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2□□□□□ -2.73
Ccdc28aQ8CEI3 Gm22783-201ENSMUST00000104089 107 ntBASIC-2□□□□□ -2.73
Ccdc28aQ8CEI3 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.01□□□□□ -2.73
Ccdc28aQ8CEI3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.01□□□□□ -2.73
Ccdc28aQ8CEI3 Gm22354-201ENSMUST00000083919 70 ntBASIC-2.01□□□□□ -2.73
Ccdc28aQ8CEI3 Gm23578-201ENSMUST00000103943 104 ntBASIC-2.02□□□□□ -2.73
Ccdc28aQ8CEI3 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.02□□□□□ -2.73
Ccdc28aQ8CEI3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-2.02□□□□□ -2.73
Ccdc28aQ8CEI3 Gm24705-201ENSMUST00000082808 107 ntBASIC-2.03□□□□□ -2.73
Ccdc28aQ8CEI3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.04□□□□□ -2.74
Ccdc28aQ8CEI3 Gm23350-201ENSMUST00000158429 103 ntBASIC-2.04□□□□□ -2.74
Ccdc28aQ8CEI3 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.04□□□□□ -2.74
Ccdc28aQ8CEI3 Gm23966-201ENSMUST00000179823 107 ntBASIC-2.05□□□□□ -2.74
Ccdc28aQ8CEI3 Gm24167-201ENSMUST00000177733 124 ntBASIC-2.06□□□□□ -2.74
Ccdc28aQ8CEI3 Gm24028-201ENSMUST00000178991 124 ntBASIC-2.06□□□□□ -2.74
Ccdc28aQ8CEI3 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.07□□□□□ -2.74
Ccdc28aQ8CEI3 AC238676.2-201ENSMUST00000220910 94 ntBASIC-2.07□□□□□ -2.74
Ccdc28aQ8CEI3 Gm22746-201ENSMUST00000082494 107 ntBASIC-2.07□□□□□ -2.74
Ccdc28aQ8CEI3 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.08□□□□□ -2.74
Ccdc28aQ8CEI3 Mir192-201ENSMUST00000083589 89 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms