Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.23□□□□□ -2.61
Nup88Q8CEC0 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.23□□□□□ -2.61
Nup88Q8CEC0 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.23□□□□□ -2.61
Nup88Q8CEC0 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.23□□□□□ -2.61
Nup88Q8CEC0 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.24□□□□□ -2.61
Nup88Q8CEC0 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.24□□□□□ -2.61
Nup88Q8CEC0 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.24□□□□□ -2.61
Nup88Q8CEC0 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.24□□□□□ -2.61
Nup88Q8CEC0 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.24□□□□□ -2.61
Nup88Q8CEC0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.25□□□□□ -2.61
Nup88Q8CEC0 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.26□□□□□ -2.61
Nup88Q8CEC0 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.27□□□□□ -2.61
Nup88Q8CEC0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
Nup88Q8CEC0 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.27□□□□□ -2.61
Nup88Q8CEC0 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.28□□□□□ -2.61
Nup88Q8CEC0 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.29□□□□□ -2.62
Nup88Q8CEC0 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.29□□□□□ -2.62
Nup88Q8CEC0 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.29□□□□□ -2.62
Nup88Q8CEC0 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.3□□□□□ -2.62
Nup88Q8CEC0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Nup88Q8CEC0 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.3□□□□□ -2.62
Nup88Q8CEC0 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.3□□□□□ -2.62
Nup88Q8CEC0 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.31□□□□□ -2.62
Nup88Q8CEC0 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.31□□□□□ -2.62
Nup88Q8CEC0 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.31□□□□□ -2.62
Nup88Q8CEC0 Snord57-201ENSMUST00000083338 72 ntBASIC-1.31□□□□□ -2.62
Nup88Q8CEC0 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.32□□□□□ -2.62
Nup88Q8CEC0 Mir876-201ENSMUST00000104659 81 ntBASIC-1.33□□□□□ -2.62
Nup88Q8CEC0 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.33□□□□□ -2.62
Nup88Q8CEC0 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.33□□□□□ -2.62
Nup88Q8CEC0 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.34□□□□□ -2.62
Nup88Q8CEC0 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.34□□□□□ -2.62
Nup88Q8CEC0 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.34□□□□□ -2.62
Nup88Q8CEC0 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.35□□□□□ -2.63
Nup88Q8CEC0 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.36□□□□□ -2.63
Nup88Q8CEC0 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.36□□□□□ -2.63
Nup88Q8CEC0 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.37□□□□□ -2.63
Nup88Q8CEC0 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.37□□□□□ -2.63
Nup88Q8CEC0 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.37□□□□□ -2.63
Nup88Q8CEC0 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.39□□□□□ -2.63
Nup88Q8CEC0 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.39□□□□□ -2.63
Nup88Q8CEC0 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.39□□□□□ -2.63
Nup88Q8CEC0 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.39□□□□□ -2.63
Nup88Q8CEC0 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.4□□□□□ -2.63
Nup88Q8CEC0 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.4□□□□□ -2.63
Nup88Q8CEC0 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.4□□□□□ -2.63
Nup88Q8CEC0 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.41□□□□□ -2.64
Nup88Q8CEC0 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.42□□□□□ -2.64
Nup88Q8CEC0 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.42□□□□□ -2.64
Nup88Q8CEC0 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.42□□□□□ -2.64
Nup88Q8CEC0 Mir543-201ENSMUST00000102286 76 ntBASIC-1.43□□□□□ -2.64
Nup88Q8CEC0 Snord123-201ENSMUST00000158692 71 ntBASIC-1.43□□□□□ -2.64
Nup88Q8CEC0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
Nup88Q8CEC0 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.44□□□□□ -2.64
Nup88Q8CEC0 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.45□□□□□ -2.64
Nup88Q8CEC0 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.45□□□□□ -2.64
Nup88Q8CEC0 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.47□□□□□ -2.64
Nup88Q8CEC0 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.47□□□□□ -2.64
Nup88Q8CEC0 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.47□□□□□ -2.64
Nup88Q8CEC0 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.47□□□□□ -2.64
Nup88Q8CEC0 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.48□□□□□ -2.65
Nup88Q8CEC0 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.49□□□□□ -2.65
Nup88Q8CEC0 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.49□□□□□ -2.65
Nup88Q8CEC0 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.49□□□□□ -2.65
Nup88Q8CEC0 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.49□□□□□ -2.65
Nup88Q8CEC0 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.49□□□□□ -2.65
Nup88Q8CEC0 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.5□□□□□ -2.65
Nup88Q8CEC0 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.5□□□□□ -2.65
Nup88Q8CEC0 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.5□□□□□ -2.65
Nup88Q8CEC0 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.5□□□□□ -2.65
Nup88Q8CEC0 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.51□□□□□ -2.65
Nup88Q8CEC0 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.51□□□□□ -2.65
Nup88Q8CEC0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.52□□□□□ -2.65
Nup88Q8CEC0 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.52□□□□□ -2.65
Nup88Q8CEC0 Mir494-201ENSMUST00000093632 85 ntBASIC-1.52□□□□□ -2.65
Nup88Q8CEC0 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.53□□□□□ -2.65
Nup88Q8CEC0 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.53□□□□□ -2.65
Nup88Q8CEC0 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.53□□□□□ -2.65
Nup88Q8CEC0 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.54□□□□□ -2.66
Nup88Q8CEC0 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.55□□□□□ -2.66
Nup88Q8CEC0 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.55□□□□□ -2.66
Nup88Q8CEC0 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.57□□□□□ -2.66
Nup88Q8CEC0 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms