Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.89□□□□□ -2.55
Atg4bQ8BGE6 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.89□□□□□ -2.55
Atg4bQ8BGE6 Snord8-201ENSMUST00000175303 110 ntBASIC-0.89□□□□□ -2.55
Atg4bQ8BGE6 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.89□□□□□ -2.55
Atg4bQ8BGE6 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.9□□□□□ -2.55
Atg4bQ8BGE6 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.9□□□□□ -2.55
Atg4bQ8BGE6 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.9□□□□□ -2.55
Atg4bQ8BGE6 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.91□□□□□ -2.56
Atg4bQ8BGE6 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.91□□□□□ -2.56
Atg4bQ8BGE6 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.91□□□□□ -2.56
Atg4bQ8BGE6 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.91□□□□□ -2.56
Atg4bQ8BGE6 Gm24492-201ENSMUST00000083798 107 ntBASIC-0.91□□□□□ -2.56
Atg4bQ8BGE6 Mir543-201ENSMUST00000102286 76 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm23369-201ENSMUST00000175406 105 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm26466-201ENSMUST00000179615 79 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.92□□□□□ -2.56
Atg4bQ8BGE6 Gm24605-201ENSMUST00000104772 96 ntBASIC-0.93□□□□□ -2.56
Atg4bQ8BGE6 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.94□□□□□ -2.56
Atg4bQ8BGE6 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.94□□□□□ -2.56
Atg4bQ8BGE6 Gm23349-201ENSMUST00000158432 98 ntBASIC-0.94□□□□□ -2.56
Atg4bQ8BGE6 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.95□□□□□ -2.56
Atg4bQ8BGE6 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.95□□□□□ -2.56
Atg4bQ8BGE6 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.95□□□□□ -2.56
Atg4bQ8BGE6 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.95□□□□□ -2.56
Atg4bQ8BGE6 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.96□□□□□ -2.56
Atg4bQ8BGE6 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.96□□□□□ -2.56
Atg4bQ8BGE6 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.97□□□□□ -2.56
Atg4bQ8BGE6 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.97□□□□□ -2.56
Atg4bQ8BGE6 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.98□□□□□ -2.57
Atg4bQ8BGE6 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.98□□□□□ -2.57
Atg4bQ8BGE6 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.99□□□□□ -2.57
Atg4bQ8BGE6 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.99□□□□□ -2.57
Atg4bQ8BGE6 Gm25428-201ENSMUST00000157608 114 ntBASIC-1□□□□□ -2.57
Atg4bQ8BGE6 Gm23590-201ENSMUST00000157661 104 ntBASIC-1□□□□□ -2.57
Atg4bQ8BGE6 Mir3083-201ENSMUST00000175377 64 ntBASIC-1□□□□□ -2.57
Atg4bQ8BGE6 Gm22446-201ENSMUST00000180108 104 ntBASIC-1□□□□□ -2.57
Atg4bQ8BGE6 Gm22354-201ENSMUST00000083919 70 ntBASIC-1□□□□□ -2.57
Atg4bQ8BGE6 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Snord57-201ENSMUST00000083338 72 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Mir494-201ENSMUST00000093632 85 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.01□□□□□ -2.57
Atg4bQ8BGE6 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.02□□□□□ -2.57
Atg4bQ8BGE6 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.02□□□□□ -2.57
Atg4bQ8BGE6 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.02□□□□□ -2.57
Atg4bQ8BGE6 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.03□□□□□ -2.57
Atg4bQ8BGE6 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.03□□□□□ -2.57
Atg4bQ8BGE6 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.03□□□□□ -2.57
Atg4bQ8BGE6 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.04□□□□□ -2.58
Atg4bQ8BGE6 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.04□□□□□ -2.58
Atg4bQ8BGE6 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.04□□□□□ -2.58
Atg4bQ8BGE6 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.04□□□□□ -2.58
Atg4bQ8BGE6 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
Atg4bQ8BGE6 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.05□□□□□ -2.58
Atg4bQ8BGE6 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.05□□□□□ -2.58
Atg4bQ8BGE6 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.05□□□□□ -2.58
Atg4bQ8BGE6 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.05□□□□□ -2.58
Atg4bQ8BGE6 Mir876-201ENSMUST00000104659 81 ntBASIC-1.06□□□□□ -2.58
Atg4bQ8BGE6 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.06□□□□□ -2.58
Atg4bQ8BGE6 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.06□□□□□ -2.58
Atg4bQ8BGE6 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.06□□□□□ -2.58
Atg4bQ8BGE6 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.06□□□□□ -2.58
Atg4bQ8BGE6 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.07□□□□□ -2.58
Atg4bQ8BGE6 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.08□□□□□ -2.58
Atg4bQ8BGE6 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.08□□□□□ -2.58
Atg4bQ8BGE6 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.08□□□□□ -2.58
Atg4bQ8BGE6 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.08□□□□□ -2.58
Atg4bQ8BGE6 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.08□□□□□ -2.58
Atg4bQ8BGE6 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
Atg4bQ8BGE6 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.09□□□□□ -2.58
Atg4bQ8BGE6 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.1□□□□□ -2.59
Atg4bQ8BGE6 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.1□□□□□ -2.59
Atg4bQ8BGE6 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.1□□□□□ -2.59
Atg4bQ8BGE6 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.11□□□□□ -2.59
Atg4bQ8BGE6 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.11□□□□□ -2.59
Atg4bQ8BGE6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Atg4bQ8BGE6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
Atg4bQ8BGE6 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.11□□□□□ -2.59
Atg4bQ8BGE6 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.12□□□□□ -2.59
Atg4bQ8BGE6 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.12□□□□□ -2.59
Atg4bQ8BGE6 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.12□□□□□ -2.59
Atg4bQ8BGE6 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.13□□□□□ -2.59
Atg4bQ8BGE6 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.13□□□□□ -2.59
Atg4bQ8BGE6 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms