Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.33□□□□□ -2.62
Smarca1Q6PGB8 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.34□□□□□ -2.62
Smarca1Q6PGB8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.36□□□□□ -2.63
Smarca1Q6PGB8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
Smarca1Q6PGB8 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.36□□□□□ -2.63
Smarca1Q6PGB8 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.36□□□□□ -2.63
Smarca1Q6PGB8 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.37□□□□□ -2.63
Smarca1Q6PGB8 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.37□□□□□ -2.63
Smarca1Q6PGB8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.37□□□□□ -2.63
Smarca1Q6PGB8 Mir136-201ENSMUST00000199494 62 ntBASIC-1.37□□□□□ -2.63
Smarca1Q6PGB8 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.38□□□□□ -2.63
Smarca1Q6PGB8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.39□□□□□ -2.63
Smarca1Q6PGB8 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.39□□□□□ -2.63
Smarca1Q6PGB8 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.39□□□□□ -2.63
Smarca1Q6PGB8 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.4□□□□□ -2.63
Smarca1Q6PGB8 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.4□□□□□ -2.63
Smarca1Q6PGB8 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.4□□□□□ -2.63
Smarca1Q6PGB8 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.4□□□□□ -2.63
Smarca1Q6PGB8 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.4□□□□□ -2.63
Smarca1Q6PGB8 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.41□□□□□ -2.64
Smarca1Q6PGB8 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.41□□□□□ -2.64
Smarca1Q6PGB8 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.42□□□□□ -2.64
Smarca1Q6PGB8 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.43□□□□□ -2.64
Smarca1Q6PGB8 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.43□□□□□ -2.64
Smarca1Q6PGB8 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.44□□□□□ -2.64
Smarca1Q6PGB8 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.46□□□□□ -2.64
Smarca1Q6PGB8 Mir702-201ENSMUST00000102285 109 ntBASIC-1.47□□□□□ -2.64
Smarca1Q6PGB8 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.47□□□□□ -2.64
Smarca1Q6PGB8 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.47□□□□□ -2.64
Smarca1Q6PGB8 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.47□□□□□ -2.64
Smarca1Q6PGB8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.48□□□□□ -2.65
Smarca1Q6PGB8 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.48□□□□□ -2.65
Smarca1Q6PGB8 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.49□□□□□ -2.65
Smarca1Q6PGB8 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.49□□□□□ -2.65
Smarca1Q6PGB8 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.5□□□□□ -2.65
Smarca1Q6PGB8 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.5□□□□□ -2.65
Smarca1Q6PGB8 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.5□□□□□ -2.65
Smarca1Q6PGB8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.51□□□□□ -2.65
Smarca1Q6PGB8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
Smarca1Q6PGB8 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.53□□□□□ -2.65
Smarca1Q6PGB8 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.53□□□□□ -2.65
Smarca1Q6PGB8 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.53□□□□□ -2.65
Smarca1Q6PGB8 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.55□□□□□ -2.66
Smarca1Q6PGB8 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.55□□□□□ -2.66
Smarca1Q6PGB8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.55□□□□□ -2.66
Smarca1Q6PGB8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.55□□□□□ -2.66
Smarca1Q6PGB8 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.56□□□□□ -2.66
Smarca1Q6PGB8 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.57□□□□□ -2.66
Smarca1Q6PGB8 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.57□□□□□ -2.66
Smarca1Q6PGB8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.6□□□□□ -2.67
Smarca1Q6PGB8 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.6□□□□□ -2.67
Smarca1Q6PGB8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
Smarca1Q6PGB8 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.62□□□□□ -2.67
Smarca1Q6PGB8 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.62□□□□□ -2.67
Smarca1Q6PGB8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.63□□□□□ -2.67
Smarca1Q6PGB8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.63□□□□□ -2.67
Smarca1Q6PGB8 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.65□□□□□ -2.67
Smarca1Q6PGB8 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.65□□□□□ -2.67
Smarca1Q6PGB8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.66□□□□□ -2.68
Smarca1Q6PGB8 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.67□□□□□ -2.68
Smarca1Q6PGB8 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.67□□□□□ -2.68
Smarca1Q6PGB8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.67□□□□□ -2.68
Smarca1Q6PGB8 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.68□□□□□ -2.68
Smarca1Q6PGB8 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.7□□□□□ -2.68
Smarca1Q6PGB8 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.7□□□□□ -2.68
Smarca1Q6PGB8 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.7□□□□□ -2.68
Smarca1Q6PGB8 Mir543-201ENSMUST00000102286 76 ntBASIC-1.71□□□□□ -2.68
Smarca1Q6PGB8 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.71□□□□□ -2.68
Smarca1Q6PGB8 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.71□□□□□ -2.68
Smarca1Q6PGB8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.72□□□□□ -2.68
Smarca1Q6PGB8 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.72□□□□□ -2.68
Smarca1Q6PGB8 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.73□□□□□ -2.69
Smarca1Q6PGB8 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.73□□□□□ -2.69
Smarca1Q6PGB8 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.74□□□□□ -2.69
Smarca1Q6PGB8 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.74□□□□□ -2.69
Smarca1Q6PGB8 Snord123-201ENSMUST00000158692 71 ntBASIC-1.75□□□□□ -2.69
Smarca1Q6PGB8 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.75□□□□□ -2.69
Smarca1Q6PGB8 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.75□□□□□ -2.69
Smarca1Q6PGB8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.75□□□□□ -2.69
Smarca1Q6PGB8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.76□□□□□ -2.69
Smarca1Q6PGB8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.77□□□□□ -2.69
Smarca1Q6PGB8 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.78□□□□□ -2.69
Smarca1Q6PGB8 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 76,532 protein–RNA pairs in 176.3 ms