Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.59□□□□□ -2.5
Six3Q62233 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.6□□□□□ -2.51
Six3Q62233 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.6□□□□□ -2.51
Six3Q62233 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.61□□□□□ -2.51
Six3Q62233 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.62□□□□□ -2.51
Six3Q62233 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.62□□□□□ -2.51
Six3Q62233 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.63□□□□□ -2.51
Six3Q62233 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.64□□□□□ -2.51
Six3Q62233 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.64□□□□□ -2.51
Six3Q62233 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.64□□□□□ -2.51
Six3Q62233 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.64□□□□□ -2.51
Six3Q62233 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.65□□□□□ -2.51
Six3Q62233 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.65□□□□□ -2.51
Six3Q62233 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.65□□□□□ -2.51
Six3Q62233 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.67□□□□□ -2.52
Six3Q62233 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.67□□□□□ -2.52
Six3Q62233 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.67□□□□□ -2.52
Six3Q62233 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.67□□□□□ -2.52
Six3Q62233 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.67□□□□□ -2.52
Six3Q62233 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.68□□□□□ -2.52
Six3Q62233 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.69□□□□□ -2.52
Six3Q62233 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.69□□□□□ -2.52
Six3Q62233 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.69□□□□□ -2.52
Six3Q62233 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.69□□□□□ -2.52
Six3Q62233 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.69□□□□□ -2.52
Six3Q62233 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.7□□□□□ -2.52
Six3Q62233 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.7□□□□□ -2.52
Six3Q62233 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.7□□□□□ -2.52
Six3Q62233 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.71□□□□□ -2.52
Six3Q62233 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.71□□□□□ -2.52
Six3Q62233 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.72□□□□□ -2.52
Six3Q62233 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.72□□□□□ -2.52
Six3Q62233 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.73□□□□□ -2.53
Six3Q62233 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.73□□□□□ -2.53
Six3Q62233 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.74□□□□□ -2.53
Six3Q62233 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.74□□□□□ -2.53
Six3Q62233 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.75□□□□□ -2.53
Six3Q62233 Mir876-201ENSMUST00000104659 81 ntBASIC-0.75□□□□□ -2.53
Six3Q62233 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.75□□□□□ -2.53
Six3Q62233 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.75□□□□□ -2.53
Six3Q62233 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.75□□□□□ -2.53
Six3Q62233 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.76□□□□□ -2.53
Six3Q62233 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
Six3Q62233 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
Six3Q62233 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.76□□□□□ -2.53
Six3Q62233 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.76□□□□□ -2.53
Six3Q62233 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.77□□□□□ -2.53
Six3Q62233 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.77□□□□□ -2.53
Six3Q62233 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.77□□□□□ -2.53
Six3Q62233 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.77□□□□□ -2.53
Six3Q62233 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.78□□□□□ -2.53
Six3Q62233 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.78□□□□□ -2.53
Six3Q62233 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.78□□□□□ -2.53
Six3Q62233 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Six3Q62233 Mir677-202ENSMUST00000197076 78 ntBASIC-0.79□□□□□ -2.54
Six3Q62233 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.8□□□□□ -2.54
Six3Q62233 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.8□□□□□ -2.54
Six3Q62233 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.8□□□□□ -2.54
Six3Q62233 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.8□□□□□ -2.54
Six3Q62233 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.81□□□□□ -2.54
Six3Q62233 Mir494-201ENSMUST00000093632 85 ntBASIC-0.81□□□□□ -2.54
Six3Q62233 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.82□□□□□ -2.54
Six3Q62233 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.82□□□□□ -2.54
Six3Q62233 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.82□□□□□ -2.54
Six3Q62233 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.83□□□□□ -2.54
Six3Q62233 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.83□□□□□ -2.54
Six3Q62233 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.83□□□□□ -2.54
Six3Q62233 Mir702-201ENSMUST00000102285 109 ntBASIC-0.84□□□□□ -2.54
Six3Q62233 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.85□□□□□ -2.55
Six3Q62233 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.85□□□□□ -2.55
Six3Q62233 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.85□□□□□ -2.55
Six3Q62233 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Gm22950-201ENSMUST00000082776 107 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Snord57-201ENSMUST00000083338 72 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.86□□□□□ -2.55
Six3Q62233 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.87□□□□□ -2.55
Six3Q62233 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.87□□□□□ -2.55
Six3Q62233 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.87□□□□□ -2.55
Six3Q62233 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.88□□□□□ -2.55
Six3Q62233 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.88□□□□□ -2.55
Six3Q62233 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
Six3Q62233 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
Six3Q62233 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.89□□□□□ -2.55
Six3Q62233 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.89□□□□□ -2.55
Six3Q62233 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.89□□□□□ -2.55
Six3Q62233 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.89□□□□□ -2.55
Six3Q62233 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.89□□□□□ -2.55
Six3Q62233 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.9□□□□□ -2.55
Six3Q62233 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.9□□□□□ -2.55
Six3Q62233 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.9□□□□□ -2.55
Six3Q62233 Gm44932-201ENSMUST00000206799 121 ntBASIC-0.9□□□□□ -2.55
Six3Q62233 Gm25022-201ENSMUST00000102205 83 ntBASIC-0.91□□□□□ -2.56
Six3Q62233 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-0.91□□□□□ -2.56
Six3Q62233 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-0.91□□□□□ -2.56
Six3Q62233 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-0.91□□□□□ -2.56
Six3Q62233 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-0.91□□□□□ -2.56
Six3Q62233 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms