Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
Trim27Q62158 Mir450b-201ENSMUST00000102095 82 ntBASIC-0.84□□□□□ -2.54
Trim27Q62158 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.84□□□□□ -2.54
Trim27Q62158 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.84□□□□□ -2.54
Trim27Q62158 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.84□□□□□ -2.54
Trim27Q62158 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.85□□□□□ -2.55
Trim27Q62158 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.86□□□□□ -2.55
Trim27Q62158 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.86□□□□□ -2.55
Trim27Q62158 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.86□□□□□ -2.55
Trim27Q62158 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.87□□□□□ -2.55
Trim27Q62158 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.87□□□□□ -2.55
Trim27Q62158 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.87□□□□□ -2.55
Trim27Q62158 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.87□□□□□ -2.55
Trim27Q62158 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Snord57-201ENSMUST00000083338 72 ntBASIC-0.88□□□□□ -2.55
Trim27Q62158 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.89□□□□□ -2.55
Trim27Q62158 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.89□□□□□ -2.55
Trim27Q62158 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.89□□□□□ -2.55
Trim27Q62158 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.9□□□□□ -2.55
Trim27Q62158 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.9□□□□□ -2.55
Trim27Q62158 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.91□□□□□ -2.56
Trim27Q62158 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 Gm24586-201ENSMUST00000116695 89 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.92□□□□□ -2.56
Trim27Q62158 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.93□□□□□ -2.56
Trim27Q62158 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.93□□□□□ -2.56
Trim27Q62158 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
Trim27Q62158 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.94□□□□□ -2.56
Trim27Q62158 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.94□□□□□ -2.56
Trim27Q62158 Mir876-201ENSMUST00000104659 81 ntBASIC-0.95□□□□□ -2.56
Trim27Q62158 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.96□□□□□ -2.56
Trim27Q62158 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.96□□□□□ -2.56
Trim27Q62158 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.96□□□□□ -2.56
Trim27Q62158 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.96□□□□□ -2.56
Trim27Q62158 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.97□□□□□ -2.56
Trim27Q62158 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.98□□□□□ -2.57
Trim27Q62158 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.98□□□□□ -2.57
Trim27Q62158 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.98□□□□□ -2.57
Trim27Q62158 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.99□□□□□ -2.57
Trim27Q62158 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.99□□□□□ -2.57
Trim27Q62158 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1□□□□□ -2.57
Trim27Q62158 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1□□□□□ -2.57
Trim27Q62158 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Trim27Q62158 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.01□□□□□ -2.57
Trim27Q62158 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.01□□□□□ -2.57
Trim27Q62158 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.01□□□□□ -2.57
Trim27Q62158 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.02□□□□□ -2.57
Trim27Q62158 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.02□□□□□ -2.57
Trim27Q62158 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.03□□□□□ -2.57
Trim27Q62158 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.03□□□□□ -2.57
Trim27Q62158 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.04□□□□□ -2.58
Trim27Q62158 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.04□□□□□ -2.58
Trim27Q62158 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.04□□□□□ -2.58
Trim27Q62158 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.04□□□□□ -2.58
Trim27Q62158 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.04□□□□□ -2.58
Trim27Q62158 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.05□□□□□ -2.58
Trim27Q62158 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.05□□□□□ -2.58
Trim27Q62158 Mir494-201ENSMUST00000093632 85 ntBASIC-1.05□□□□□ -2.58
Trim27Q62158 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.06□□□□□ -2.58
Trim27Q62158 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.06□□□□□ -2.58
Trim27Q62158 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.07□□□□□ -2.58
Trim27Q62158 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.07□□□□□ -2.58
Trim27Q62158 Snord123-201ENSMUST00000158692 71 ntBASIC-1.08□□□□□ -2.58
Trim27Q62158 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.08□□□□□ -2.58
Trim27Q62158 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.08□□□□□ -2.58
Trim27Q62158 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.09□□□□□ -2.58
Trim27Q62158 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.09□□□□□ -2.58
Trim27Q62158 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Snord8-201ENSMUST00000175303 110 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.1□□□□□ -2.59
Trim27Q62158 Mir543-201ENSMUST00000102286 76 ntBASIC-1.11□□□□□ -2.59
Trim27Q62158 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.11□□□□□ -2.59
Trim27Q62158 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.11□□□□□ -2.59
Trim27Q62158 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms