Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.16□□□□□ -2.6
Trim38Q5SZ99 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.16□□□□□ -2.6
Trim38Q5SZ99 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.18□□□□□ -2.6
Trim38Q5SZ99 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.2□□□□□ -2.6
Trim38Q5SZ99 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.2□□□□□ -2.6
Trim38Q5SZ99 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.23□□□□□ -2.61
Trim38Q5SZ99 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.26□□□□□ -2.61
Trim38Q5SZ99 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.26□□□□□ -2.61
Trim38Q5SZ99 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Snord123-201ENSMUST00000158692 71 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.28□□□□□ -2.61
Trim38Q5SZ99 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.28□□□□□ -2.61
Trim38Q5SZ99 Mir543-201ENSMUST00000102286 76 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.31□□□□□ -2.62
Trim38Q5SZ99 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.36□□□□□ -2.63
Trim38Q5SZ99 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.36□□□□□ -2.63
Trim38Q5SZ99 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.37□□□□□ -2.63
Trim38Q5SZ99 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.39□□□□□ -2.63
Trim38Q5SZ99 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.39□□□□□ -2.63
Trim38Q5SZ99 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.4□□□□□ -2.63
Trim38Q5SZ99 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.43□□□□□ -2.64
Trim38Q5SZ99 Mir876-201ENSMUST00000104659 81 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Mir494-201ENSMUST00000093632 85 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 206.7 ms