Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22775-201ENSMUST00000177630 120 ntBASIC-3.78□□□□□ -3.01
Trav3-1Q5R1I8 Gm23569-201ENSMUST00000180120 120 ntBASIC-3.78□□□□□ -3.01
Trav3-1Q5R1I8 Gm25599-201ENSMUST00000157816 103 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Gm23543-201ENSMUST00000158207 106 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Gm24637-201ENSMUST00000158674 85 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Mir466e-201ENSMUST00000198862 84 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Gm24705-201ENSMUST00000082808 107 ntBASIC-3.79□□□□□ -3.02
Trav3-1Q5R1I8 Gm24099-201ENSMUST00000083384 107 ntBASIC-3.8□□□□□ -3.02
Trav3-1Q5R1I8 Gm24449-201ENSMUST00000083985 106 ntBASIC-3.8□□□□□ -3.02
Trav3-1Q5R1I8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-3.8□□□□□ -3.02
Trav3-1Q5R1I8 Gm26307-201ENSMUST00000157767 126 ntBASIC-3.81□□□□□ -3.02
Trav3-1Q5R1I8 Gm23209-201ENSMUST00000158667 110 ntBASIC-3.81□□□□□ -3.02
Trav3-1Q5R1I8 Gm22297-201ENSMUST00000083312 106 ntBASIC-3.81□□□□□ -3.02
Trav3-1Q5R1I8 Gm23138-201ENSMUST00000083365 103 ntBASIC-3.83□□□□□ -3.02
Trav3-1Q5R1I8 Gm22070-201ENSMUST00000178475 107 ntBASIC-3.84□□□□□ -3.02
Trav3-1Q5R1I8 Gm22770-201ENSMUST00000158368 67 ntBASIC-3.85□□□□□ -3.03
Trav3-1Q5R1I8 Gm24502-201ENSMUST00000158453 105 ntBASIC-3.85□□□□□ -3.03
Trav3-1Q5R1I8 Gm38298-201ENSMUST00000193578 118 ntBASIC-3.85□□□□□ -3.03
Trav3-1Q5R1I8 Gm22296-201ENSMUST00000083310 103 ntBASIC-3.85□□□□□ -3.03
Trav3-1Q5R1I8 Gm22746-201ENSMUST00000082494 107 ntBASIC-3.86□□□□□ -3.03
Trav3-1Q5R1I8 Gm25141-201ENSMUST00000083177 107 ntBASIC-3.87□□□□□ -3.03
Trav3-1Q5R1I8 Gm26425-201ENSMUST00000122529 82 ntBASIC-3.88□□□□□ -3.03
Trav3-1Q5R1I8 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-3.89□□□□□ -3.03
Trav3-1Q5R1I8 Gm23990-201ENSMUST00000117031 117 ntBASIC-3.9□□□□□ -3.03
Trav3-1Q5R1I8 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.9□□□□□ -3.03
Trav3-1Q5R1I8 Gm23556-201ENSMUST00000157821 92 ntBASIC-3.9□□□□□ -3.03
Trav3-1Q5R1I8 Gm23651-201ENSMUST00000116755 120 ntBASIC-3.91□□□□□ -3.04
Trav3-1Q5R1I8 Gm43206-201ENSMUST00000197990 114 ntBASIC-3.91□□□□□ -3.04
Trav3-1Q5R1I8 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.93□□□□□ -3.04
Trav3-1Q5R1I8 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.93□□□□□ -3.04
Trav3-1Q5R1I8 Gm24724-201ENSMUST00000158230 107 ntBASIC-3.94□□□□□ -3.04
Trav3-1Q5R1I8 Gm26468-201ENSMUST00000158644 106 ntBASIC-3.94□□□□□ -3.04
Trav3-1Q5R1I8 Gm25482-201ENSMUST00000083225 107 ntBASIC-3.94□□□□□ -3.04
Trav3-1Q5R1I8 Gm22836-201ENSMUST00000158441 61 ntBASIC-3.95□□□□□ -3.04
Trav3-1Q5R1I8 Gm26441-201ENSMUST00000082590 104 ntBASIC-3.95□□□□□ -3.04
Trav3-1Q5R1I8 Gm25061-201ENSMUST00000104665 107 ntBASIC-3.96□□□□□ -3.04
Trav3-1Q5R1I8 Gm22349-201ENSMUST00000157864 107 ntBASIC-3.96□□□□□ -3.04
Trav3-1Q5R1I8 mt-Tt-201ENSMUST00000082422 67 ntBASIC-3.96□□□□□ -3.04
Trav3-1Q5R1I8 Gm25847-201ENSMUST00000116793 96 ntBASIC-3.98□□□□□ -3.05
Trav3-1Q5R1I8 Gm22973-201ENSMUST00000083298 191 ntBASIC-3.98□□□□□ -3.05
Trav3-1Q5R1I8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-4□□□□□ -3.05
Trav3-1Q5R1I8 Gm11333-201ENSMUST00000119479 148 ntBASIC-4□□□□□ -3.05
Trav3-1Q5R1I8 Gm25678-201ENSMUST00000174984 73 ntBASIC-4□□□□□ -3.05
Trav3-1Q5R1I8 Gm23315-201ENSMUST00000158003 109 ntBASIC-4.03□□□□□ -3.05
Trav3-1Q5R1I8 Gm22965-201ENSMUST00000157958 101 ntBASIC-4.04□□□□□ -3.06
Trav3-1Q5R1I8 Gm27694-201ENSMUST00000184740 86 ntBASIC-4.05□□□□□ -3.06
Trav3-1Q5R1I8 Gm44339-201ENSMUST00000200598 84 ntBASIC-4.05□□□□□ -3.06
Trav3-1Q5R1I8 AC238676.2-201ENSMUST00000220910 94 ntBASIC-4.05□□□□□ -3.06
Trav3-1Q5R1I8 Mir493-201ENSMUST00000103837 83 ntBASIC-4.06□□□□□ -3.06
Trav3-1Q5R1I8 Gm25542-201ENSMUST00000116889 94 ntBASIC-4.07□□□□□ -3.06
Trav3-1Q5R1I8 Gm22286-201ENSMUST00000179708 107 ntBASIC-4.07□□□□□ -3.06
Trav3-1Q5R1I8 mt-Tv-201ENSMUST00000082389 69 ntBASIC-4.07□□□□□ -3.06
Trav3-1Q5R1I8 Mir154-201ENSMUST00000083514 66 ntBASIC-4.07□□□□□ -3.06
Trav3-1Q5R1I8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-4.08□□□□□ -3.06
Trav3-1Q5R1I8 Gm23468-201ENSMUST00000157125 108 ntBASIC-4.09□□□□□ -3.06
Trav3-1Q5R1I8 Gm27845-201ENSMUST00000184479 114 ntBASIC-4.09□□□□□ -3.06
Trav3-1Q5R1I8 CT010505.1-201ENSMUST00000227026 396 ntBASIC-4.11□□□□□ -3.07
Trav3-1Q5R1I8 Gm24297-201ENSMUST00000158300 68 ntBASIC-4.12□□□□□ -3.07
Trav3-1Q5R1I8 Gm23258-201ENSMUST00000158319 106 ntBASIC-4.12□□□□□ -3.07
Trav3-1Q5R1I8 Gm23369-201ENSMUST00000175406 105 ntBASIC-4.12□□□□□ -3.07
Trav3-1Q5R1I8 Gm44481-201ENSMUST00000197288 84 ntBASIC-4.13□□□□□ -3.07
Trav3-1Q5R1I8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-4.13□□□□□ -3.07
Trav3-1Q5R1I8 Gm25779-201ENSMUST00000116710 95 ntBASIC-4.14□□□□□ -3.07
Trav3-1Q5R1I8 Gm23434-201ENSMUST00000157179 100 ntBASIC-4.14□□□□□ -3.07
Trav3-1Q5R1I8 Mir3064-201ENSMUST00000175532 67 ntBASIC-4.16□□□□□ -3.08
Trav3-1Q5R1I8 mt-Tr-201ENSMUST00000082412 68 ntBASIC-4.16□□□□□ -3.08
Trav3-1Q5R1I8 Mir1912-201ENSMUST00000175298 87 ntBASIC-4.17□□□□□ -3.08
Trav3-1Q5R1I8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
Trav3-1Q5R1I8 Gm24106-201ENSMUST00000175498 127 ntBASIC-4.18□□□□□ -3.08
Trav3-1Q5R1I8 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.19□□□□□ -3.08
Trav3-1Q5R1I8 Gm24259-201ENSMUST00000083740 107 ntBASIC-4.19□□□□□ -3.08
Trav3-1Q5R1I8 Gm25740-201ENSMUST00000180247 107 ntBASIC-4.2□□□□□ -3.08
Trav3-1Q5R1I8 Gm23790-201ENSMUST00000083013 107 ntBASIC-4.23□□□□□ -3.09
Trav3-1Q5R1I8 Gm25648-201ENSMUST00000177844 79 ntBASIC-4.24□□□□□ -3.09
Trav3-1Q5R1I8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-4.25□□□□□ -3.09
Trav3-1Q5R1I8 Gm22071-201ENSMUST00000116857 83 ntBASIC-4.25□□□□□ -3.09
Trav3-1Q5R1I8 Gm24723-201ENSMUST00000158233 132 ntBASIC-4.25□□□□□ -3.09
Trav3-1Q5R1I8 Gm26257-201ENSMUST00000122500 107 ntBASIC-4.26□□□□□ -3.09
Trav3-1Q5R1I8 n-R5s155-201ENSMUST00000122531 113 ntBASIC-4.26□□□□□ -3.09
Trav3-1Q5R1I8 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.26□□□□□ -3.09
Trav3-1Q5R1I8 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.26□□□□□ -3.09
Trav3-1Q5R1I8 Gm22057-201ENSMUST00000083387 107 ntBASIC-4.26□□□□□ -3.09
Trav3-1Q5R1I8 Gm24996-201ENSMUST00000158390 99 ntBASIC-4.27□□□□□ -3.09
Trav3-1Q5R1I8 Gm25753-201ENSMUST00000116792 121 ntBASIC-4.28□□□□□ -3.09
Trav3-1Q5R1I8 Gm26253-201ENSMUST00000122493 103 ntBASIC-4.28□□□□□ -3.09
Trav3-1Q5R1I8 Gm23349-201ENSMUST00000158432 98 ntBASIC-4.28□□□□□ -3.09
Trav3-1Q5R1I8 Gm22951-201ENSMUST00000179471 107 ntBASIC-4.28□□□□□ -3.09
Trav3-1Q5R1I8 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-4.29□□□□□ -3.1
Trav3-1Q5R1I8 Gm22101-201ENSMUST00000157928 103 ntBASIC-4.3□□□□□ -3.1
Trav3-1Q5R1I8 Gm44470-201ENSMUST00000203913 142 ntBASIC-4.3□□□□□ -3.1
Trav3-1Q5R1I8 Gm26225-201ENSMUST00000082508 135 ntBASIC-4.31□□□□□ -3.1
Trav3-1Q5R1I8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-4.33□□□□□ -3.1
Trav3-1Q5R1I8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-4.33□□□□□ -3.1
Trav3-1Q5R1I8 Gm22490-201ENSMUST00000157188 119 ntBASIC-4.33□□□□□ -3.1
Trav3-1Q5R1I8 Gm24916-201ENSMUST00000157287 79 ntBASIC-4.33□□□□□ -3.1
Trav3-1Q5R1I8 Gm24797-201ENSMUST00000178103 107 ntBASIC-4.34□□□□□ -3.1
Trav3-1Q5R1I8 Gm23856-201ENSMUST00000158380 99 ntBASIC-4.35□□□□□ -3.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms