Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm22838-201ENSMUST00000158437 99 ntBASIC0,53□□□□□ -2,32
Rnf43Q5NCP0 Gm23483-201ENSMUST00000104179 108 ntBASIC0,52□□□□□ -2,33
Rnf43Q5NCP0 Gm23607-201ENSMUST00000104550 126 ntBASIC0,52□□□□□ -2,33
Rnf43Q5NCP0 Gm27749-201ENSMUST00000183651 125 ntBASIC0,52□□□□□ -2,33
Rnf43Q5NCP0 Gm38208-201ENSMUST00000192476 114 ntBASIC0,52□□□□□ -2,33
Rnf43Q5NCP0 Gm24651-201ENSMUST00000157107 107 ntBASIC0,5□□□□□ -2,33
Rnf43Q5NCP0 Gm22260-201ENSMUST00000178643 107 ntBASIC0,5□□□□□ -2,33
Rnf43Q5NCP0 Gm27784-201ENSMUST00000184926 113 ntBASIC0,5□□□□□ -2,33
Rnf43Q5NCP0 Gm44828-201ENSMUST00000203745 106 ntBASIC0,5□□□□□ -2,33
Rnf43Q5NCP0 Mir1948-201ENSMUST00000157325 85 ntBASIC0,48□□□□□ -2,33
Rnf43Q5NCP0 Gm23159-201ENSMUST00000175088 77 ntBASIC0,48□□□□□ -2,33
Rnf43Q5NCP0 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0,48□□□□□ -2,33
Rnf43Q5NCP0 Gm28001-201ENSMUST00000183561 117 ntBASIC0,48□□□□□ -2,33
Rnf43Q5NCP0 Mir702-201ENSMUST00000102285 109 ntBASIC0,47□□□□□ -2,33
Rnf43Q5NCP0 Mir5124a-201ENSMUST00000175528 72 ntBASIC0,47□□□□□ -2,33
Rnf43Q5NCP0 Scarna8-201ENSMUST00000158333 131 ntBASIC0,46□□□□□ -2,34
Rnf43Q5NCP0 Gm22088-201ENSMUST00000158341 117 ntBASIC0,46□□□□□ -2,34
Rnf43Q5NCP0 Gm23442-201ENSMUST00000082919 134 ntBASIC0,46□□□□□ -2,34
Rnf43Q5NCP0 Gm25497-201ENSMUST00000104425 132 ntBASIC0,45□□□□□ -2,34
Rnf43Q5NCP0 Gm23994-201ENSMUST00000158059 88 ntBASIC0,45□□□□□ -2,34
Rnf43Q5NCP0 Mir3967-201ENSMUST00000198710 68 ntBASIC0,45□□□□□ -2,34
Rnf43Q5NCP0 Mir669f-201ENSMUST00000103850 121 ntBASIC0,44□□□□□ -2,34
Rnf43Q5NCP0 Gm43432-201ENSMUST00000196352 121 ntBASIC0,44□□□□□ -2,34
Rnf43Q5NCP0 Mir327-201ENSMUST00000199328 69 ntBASIC0,44□□□□□ -2,34
Rnf43Q5NCP0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0,44□□□□□ -2,34
Rnf43Q5NCP0 Gm22759-201ENSMUST00000102276 96 ntBASIC0,43□□□□□ -2,34
Rnf43Q5NCP0 Gm26303-201ENSMUST00000116845 119 ntBASIC0,43□□□□□ -2,34
Rnf43Q5NCP0 Mir344-2-201ENSMUST00000175446 80 ntBASIC0,43□□□□□ -2,34
Rnf43Q5NCP0 Mir7077-201ENSMUST00000183991 57 ntBASIC0,43□□□□□ -2,34
Rnf43Q5NCP0 Gm23531-201ENSMUST00000104567 68 ntBASIC0,42□□□□□ -2,34
Rnf43Q5NCP0 Gm24843-201ENSMUST00000158682 76 ntBASIC0,42□□□□□ -2,34
Rnf43Q5NCP0 Gm22550-201ENSMUST00000179774 107 ntBASIC0,42□□□□□ -2,34
Rnf43Q5NCP0 Gm27475-201ENSMUST00000183420 61 ntBASIC0,42□□□□□ -2,34
Rnf43Q5NCP0 Gm22060-201ENSMUST00000082558 107 ntBASIC0,42□□□□□ -2,34
Rnf43Q5NCP0 Gm24467-201ENSMUST00000157887 126 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm25903-201ENSMUST00000158492 103 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm23992-201ENSMUST00000174981 67 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm44328-201ENSMUST00000199331 75 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm25132-201ENSMUST00000082652 107 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm22056-201ENSMUST00000083386 81 ntBASIC0,41□□□□□ -2,34
Rnf43Q5NCP0 Gm23821-201ENSMUST00000158738 106 ntBASIC0,4□□□□□ -2,35
Rnf43Q5NCP0 Mir7651-201ENSMUST00000184154 64 ntBASIC0,4□□□□□ -2,35
Rnf43Q5NCP0 Mir297b-201ENSMUST00000102268 109 ntBASIC0,39□□□□□ -2,35
Rnf43Q5NCP0 Gm25510-201ENSMUST00000116986 123 ntBASIC0,39□□□□□ -2,35
Rnf43Q5NCP0 Gm25862-201ENSMUST00000158250 129 ntBASIC0,39□□□□□ -2,35
Rnf43Q5NCP0 Mir6896-201ENSMUST00000198033 73 ntBASIC0,39□□□□□ -2,35
Rnf43Q5NCP0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0,39□□□□□ -2,35
Rnf43Q5NCP0 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0,38□□□□□ -2,35
Rnf43Q5NCP0 Gm23278-201ENSMUST00000157911 143 ntBASIC0,38□□□□□ -2,35
Rnf43Q5NCP0 Gm26116-201ENSMUST00000175600 77 ntBASIC0,38□□□□□ -2,35
Rnf43Q5NCP0 Mir8107-201ENSMUST00000184024 117 ntBASIC0,37□□□□□ -2,35
Rnf43Q5NCP0 Gm26227-201ENSMUST00000082510 101 ntBASIC0,37□□□□□ -2,35
Rnf43Q5NCP0 Gm24372-201ENSMUST00000104400 110 ntBASIC0,36□□□□□ -2,35
Rnf43Q5NCP0 Gm37646-201ENSMUST00000191756 111 ntBASIC0,36□□□□□ -2,35
Rnf43Q5NCP0 Mir710-201ENSMUST00000102088 110 ntBASIC0,35□□□□□ -2,35
Rnf43Q5NCP0 Gm24833-201ENSMUST00000116775 120 ntBASIC0,34□□□□□ -2,36
Rnf43Q5NCP0 Gm23909-201ENSMUST00000104598 131 ntBASIC0,31□□□□□ -2,36
Rnf43Q5NCP0 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0,31□□□□□ -2,36
Rnf43Q5NCP0 Gm25885-201ENSMUST00000157779 109 ntBASIC0,3□□□□□ -2,36
Rnf43Q5NCP0 Gm24971-201ENSMUST00000175581 110 ntBASIC0,3□□□□□ -2,36
Rnf43Q5NCP0 Snord42b-201ENSMUST00000083742 69 ntBASIC0,3□□□□□ -2,36
Rnf43Q5NCP0 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,29□□□□□ -2,36
Rnf43Q5NCP0 Gm26152-201ENSMUST00000157427 101 ntBASIC0,29□□□□□ -2,36
Rnf43Q5NCP0 Snord91a-201ENSMUST00000104305 93 ntBASIC0,28□□□□□ -2,36
Rnf43Q5NCP0 Mir295-201ENSMUST00000104694 69 ntBASIC0,27□□□□□ -2,37
Rnf43Q5NCP0 Gm44375-201ENSMUST00000196657 150 ntBASIC0,27□□□□□ -2,37
Rnf43Q5NCP0 Mir141-201ENSMUST00000083540 72 ntBASIC0,27□□□□□ -2,37
Rnf43Q5NCP0 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0,27□□□□□ -2,37
Rnf43Q5NCP0 Gm25952-201ENSMUST00000175329 74 ntBASIC0,26□□□□□ -2,37
Rnf43Q5NCP0 Gm22593-201ENSMUST00000104245 109 ntBASIC0,24□□□□□ -2,37
Rnf43Q5NCP0 Mir6365-201ENSMUST00000183990 101 ntBASIC0,24□□□□□ -2,37
Rnf43Q5NCP0 Mir3089-201ENSMUST00000175350 84 ntBASIC0,23□□□□□ -2,37
Rnf43Q5NCP0 Gm42773-201ENSMUST00000196962 148 ntBASIC0,23□□□□□ -2,37
Rnf43Q5NCP0 Snord85-201ENSMUST00000083262 73 ntBASIC0,22□□□□□ -2,37
Rnf43Q5NCP0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0,21□□□□□ -2,38
Rnf43Q5NCP0 Mir18b-201ENSMUST00000103923 83 ntBASIC0,2□□□□□ -2,38
Rnf43Q5NCP0 Gm25388-201ENSMUST00000157339 151 ntBASIC0,2□□□□□ -2,38
Rnf43Q5NCP0 Gm25431-201ENSMUST00000101978 107 ntBASIC0,19□□□□□ -2,38
Rnf43Q5NCP0 Gm22327-201ENSMUST00000158899 108 ntBASIC0,19□□□□□ -2,38
Rnf43Q5NCP0 Gm22305-201ENSMUST00000082690 108 ntBASIC0,19□□□□□ -2,38
Rnf43Q5NCP0 Gm25023-201ENSMUST00000082977 107 ntBASIC0,19□□□□□ -2,38
Rnf43Q5NCP0 Gm24793-201ENSMUST00000104289 132 ntBASIC0,18□□□□□ -2,38
Rnf43Q5NCP0 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0,18□□□□□ -2,38
Rnf43Q5NCP0 Gm23749-201ENSMUST00000104223 131 ntBASIC0,17□□□□□ -2,38
Rnf43Q5NCP0 Mir466q-201ENSMUST00000175249 76 ntBASIC0,17□□□□□ -2,38
Rnf43Q5NCP0 Gm22232-201ENSMUST00000104654 94 ntBASIC0,15□□□□□ -2,39
Rnf43Q5NCP0 Gm22197-201ENSMUST00000116866 58 ntBASIC0,15□□□□□ -2,39
Rnf43Q5NCP0 Gm26210-201ENSMUST00000158680 91 ntBASIC0,15□□□□□ -2,39
Rnf43Q5NCP0 Mir6904-201ENSMUST00000183443 67 ntBASIC0,15□□□□□ -2,39
Rnf43Q5NCP0 Gm25249-201ENSMUST00000175471 78 ntBASIC0,14□□□□□ -2,39
Rnf43Q5NCP0 AC167019.1-201ENSMUST00000227913 106 ntBASIC0,14□□□□□ -2,39
Rnf43Q5NCP0 Gm22368-201ENSMUST00000102416 109 ntBASIC0,13□□□□□ -2,39
Rnf43Q5NCP0 Gm25995-201ENSMUST00000175396 142 ntBASIC0,13□□□□□ -2,39
Rnf43Q5NCP0 Gm24194-201ENSMUST00000116805 90 ntBASIC0,12□□□□□ -2,39
Rnf43Q5NCP0 Gm44347-201ENSMUST00000199602 108 ntBASIC0,12□□□□□ -2,39
Rnf43Q5NCP0 Gm24336-201ENSMUST00000104203 146 ntBASIC0,11□□□□□ -2,39
Rnf43Q5NCP0 Gm24381-201ENSMUST00000122697 104 ntBASIC0,11□□□□□ -2,39
Rnf43Q5NCP0 Gm22962-201ENSMUST00000157962 73 ntBASIC0,11□□□□□ -2,39
Rnf43Q5NCP0 Gm25137-201ENSMUST00000083251 110 ntBASIC0,11□□□□□ -2,39
Rnf43Q5NCP0 Gm24903-201ENSMUST00000158131 126 ntBASIC0,09□□□□□ -2,4
Retrieved 100 of 76,532 protein–RNA pairs in 124,8 ms