Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 AC154296.2-201ENSMUST00000214696 545 ntBASIC-5.09□□□□□ -3.22
Ccdc88bQ4QRL3 Gm44395-201ENSMUST00000197056 153 ntBASIC-5.1□□□□□ -3.23
Ccdc88bQ4QRL3 Gm24241-201ENSMUST00000157787 145 ntBASIC-5.13□□□□□ -3.23
Ccdc88bQ4QRL3 Gm28211-201ENSMUST00000190920 315 ntBASIC-5.14□□□□□ -3.23
Ccdc88bQ4QRL3 Gm11333-201ENSMUST00000119479 148 ntBASIC-5.15□□□□□ -3.23
Ccdc88bQ4QRL3 Gm25390-201ENSMUST00000157341 103 ntBASIC-5.15□□□□□ -3.23
Ccdc88bQ4QRL3 Gm38298-201ENSMUST00000193578 118 ntBASIC-5.17□□□□□ -3.24
Ccdc88bQ4QRL3 Gm37404-201ENSMUST00000195726 359 ntBASIC-5.17□□□□□ -3.24
Ccdc88bQ4QRL3 Gm24150-201ENSMUST00000082759 104 ntBASIC-5.18□□□□□ -3.24
Ccdc88bQ4QRL3 Gm24723-201ENSMUST00000158233 132 ntBASIC-5.19□□□□□ -3.24
Ccdc88bQ4QRL3 Gm24996-201ENSMUST00000158390 99 ntBASIC-5.19□□□□□ -3.24
Ccdc88bQ4QRL3 Gm23141-201ENSMUST00000178682 94 ntBASIC-5.19□□□□□ -3.24
Ccdc88bQ4QRL3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-5.2□□□□□ -3.24
Ccdc88bQ4QRL3 Gm22989-201ENSMUST00000158313 86 ntBASIC-5.2□□□□□ -3.24
Ccdc88bQ4QRL3 Gm22879-201ENSMUST00000082895 74 ntBASIC-5.2□□□□□ -3.24
Ccdc88bQ4QRL3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-5.2□□□□□ -3.24
Ccdc88bQ4QRL3 Gm45492-201ENSMUST00000211611 288 ntBASIC-5.2□□□□□ -3.24
Ccdc88bQ4QRL3 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-5.21□□□□□ -3.24
Ccdc88bQ4QRL3 Gm26425-201ENSMUST00000122529 82 ntBASIC-5.21□□□□□ -3.24
Ccdc88bQ4QRL3 Gm25648-201ENSMUST00000177844 79 ntBASIC-5.21□□□□□ -3.24
Ccdc88bQ4QRL3 AL929265.1-201ENSMUST00000213427 125 ntBASIC-5.21□□□□□ -3.24
Ccdc88bQ4QRL3 Gm22032-201ENSMUST00000116946 116 ntBASIC-5.22□□□□□ -3.25
Ccdc88bQ4QRL3 Gm26441-201ENSMUST00000082590 104 ntBASIC-5.22□□□□□ -3.25
Ccdc88bQ4QRL3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-5.23□□□□□ -3.25
Ccdc88bQ4QRL3 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-5.24□□□□□ -3.25
Ccdc88bQ4QRL3 CT571266.1-201ENSMUST00000222859 153 ntBASIC-5.24□□□□□ -3.25
Ccdc88bQ4QRL3 Gm22925-201ENSMUST00000174956 102 ntBASIC-5.25□□□□□ -3.25
Ccdc88bQ4QRL3 Mir7093-201ENSMUST00000184195 101 ntBASIC-5.25□□□□□ -3.25
Ccdc88bQ4QRL3 mt-Ti-201ENSMUST00000082393 69 ntBASIC-5.25□□□□□ -3.25
Ccdc88bQ4QRL3 Gm26204-201ENSMUST00000082906 107 ntBASIC-5.25□□□□□ -3.25
Ccdc88bQ4QRL3 Gm23581-201ENSMUST00000158531 63 ntBASIC-5.26□□□□□ -3.25
Ccdc88bQ4QRL3 Gm23210-201ENSMUST00000158668 98 ntBASIC-5.26□□□□□ -3.25
Ccdc88bQ4QRL3 Gm22681-201ENSMUST00000083853 106 ntBASIC-5.26□□□□□ -3.25
Ccdc88bQ4QRL3 Gm24737-201ENSMUST00000158861 100 ntBASIC-5.26□□□□□ -3.25
Ccdc88bQ4QRL3 AL935138.1-201ENSMUST00000215309 196 ntBASIC-5.26□□□□□ -3.25
Ccdc88bQ4QRL3 Gm22770-201ENSMUST00000158368 67 ntBASIC-5.27□□□□□ -3.25
Ccdc88bQ4QRL3 Gm26393-201ENSMUST00000157625 129 ntBASIC-5.28□□□□□ -3.25
Ccdc88bQ4QRL3 Gm23787-201ENSMUST00000122538 73 ntBASIC-5.29□□□□□ -3.26
Ccdc88bQ4QRL3 Gm24131-201ENSMUST00000158539 107 ntBASIC-5.29□□□□□ -3.26
Ccdc88bQ4QRL3 Gm24797-201ENSMUST00000178103 107 ntBASIC-5.29□□□□□ -3.26
Ccdc88bQ4QRL3 Gm27465-201ENSMUST00000184290 91 ntBASIC-5.29□□□□□ -3.26
Ccdc88bQ4QRL3 Gm26257-201ENSMUST00000122500 107 ntBASIC-5.31□□□□□ -3.26
Ccdc88bQ4QRL3 Gm14838-201ENSMUST00000118913 248 ntBASIC-5.32□□□□□ -3.26
Ccdc88bQ4QRL3 Mir3064-201ENSMUST00000175532 67 ntBASIC-5.32□□□□□ -3.26
Ccdc88bQ4QRL3 Gm25542-201ENSMUST00000116889 94 ntBASIC-5.33□□□□□ -3.26
Ccdc88bQ4QRL3 Gm13339-201ENSMUST00000120651 510 ntBASIC-5.33□□□□□ -3.26
Ccdc88bQ4QRL3 Gm25362-201ENSMUST00000158854 105 ntBASIC-5.34□□□□□ -3.26
Ccdc88bQ4QRL3 Gm27671-201ENSMUST00000183739 66 ntBASIC-5.35□□□□□ -3.27
Ccdc88bQ4QRL3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-5.36□□□□□ -3.27
Ccdc88bQ4QRL3 Gm22101-201ENSMUST00000157928 103 ntBASIC-5.39□□□□□ -3.27
Ccdc88bQ4QRL3 Gm23369-201ENSMUST00000175406 105 ntBASIC-5.39□□□□□ -3.27
Ccdc88bQ4QRL3 Gm28438-201ENSMUST00000188299 345 ntBASIC-5.39□□□□□ -3.27
Ccdc88bQ4QRL3 Gm25678-201ENSMUST00000174984 73 ntBASIC-5.4□□□□□ -3.27
Ccdc88bQ4QRL3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-5.41□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23468-201ENSMUST00000157125 108 ntBASIC-5.42□□□□□ -3.28
Ccdc88bQ4QRL3 Gm22775-201ENSMUST00000177630 120 ntBASIC-5.42□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23569-201ENSMUST00000180120 120 ntBASIC-5.42□□□□□ -3.28
Ccdc88bQ4QRL3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-5.44□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23345-201ENSMUST00000083817 150 ntBASIC-5.44□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23651-201ENSMUST00000116755 120 ntBASIC-5.45□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23958-201ENSMUST00000157207 105 ntBASIC-5.45□□□□□ -3.28
Ccdc88bQ4QRL3 Gm22056-201ENSMUST00000083386 81 ntBASIC-5.45□□□□□ -3.28
Ccdc88bQ4QRL3 mt-Tt-201ENSMUST00000082422 67 ntBASIC-5.46□□□□□ -3.28
Ccdc88bQ4QRL3 Gm23856-201ENSMUST00000158380 99 ntBASIC-5.47□□□□□ -3.29
Ccdc88bQ4QRL3 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-5.47□□□□□ -3.29
Ccdc88bQ4QRL3 Gm25740-201ENSMUST00000180247 107 ntBASIC-5.47□□□□□ -3.29
Ccdc88bQ4QRL3 Gm25482-201ENSMUST00000083225 107 ntBASIC-5.51□□□□□ -3.29
Ccdc88bQ4QRL3 mt-Tv-201ENSMUST00000082389 69 ntBASIC-5.52□□□□□ -3.29
Ccdc88bQ4QRL3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-5.53□□□□□ -3.3
Ccdc88bQ4QRL3 Gm44373-201ENSMUST00000196112 169 ntBASIC-5.54□□□□□ -3.3
Ccdc88bQ4QRL3 Gm13059-201ENSMUST00000119881 398 ntBASIC-5.55□□□□□ -3.3
Ccdc88bQ4QRL3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-5.55□□□□□ -3.3
Ccdc88bQ4QRL3 Gm24225-201ENSMUST00000158825 98 ntBASIC-5.57□□□□□ -3.3
Ccdc88bQ4QRL3 Gm25599-201ENSMUST00000157816 103 ntBASIC-5.58□□□□□ -3.3
Ccdc88bQ4QRL3 Mir471-201ENSMUST00000093596 67 ntBASIC-5.58□□□□□ -3.3
Ccdc88bQ4QRL3 Gm26306-201ENSMUST00000157773 119 ntBASIC-5.59□□□□□ -3.3
Ccdc88bQ4QRL3 Mir1955-201ENSMUST00000158014 98 ntBASIC-5.61□□□□□ -3.31
Ccdc88bQ4QRL3 Gm26052-201ENSMUST00000104646 84 ntBASIC-5.62□□□□□ -3.31
Ccdc88bQ4QRL3 Gm22260-201ENSMUST00000178643 107 ntBASIC-5.64□□□□□ -3.31
Ccdc88bQ4QRL3 Gm23349-201ENSMUST00000158432 98 ntBASIC-5.64□□□□□ -3.31
Ccdc88bQ4QRL3 Gm38280-201ENSMUST00000192610 158 ntBASIC-5.64□□□□□ -3.31
Ccdc88bQ4QRL3 Gm24651-201ENSMUST00000157107 107 ntBASIC-5.65□□□□□ -3.31
Ccdc88bQ4QRL3 Snord58b-201ENSMUST00000082937 66 ntBASIC-5.67□□□□□ -3.32
Ccdc88bQ4QRL3 Gm24331-201ENSMUST00000175099 67 ntBASIC-5.68□□□□□ -3.32
Ccdc88bQ4QRL3 Gm23801-201ENSMUST00000175561 67 ntBASIC-5.68□□□□□ -3.32
Ccdc88bQ4QRL3 Gm24485-201ENSMUST00000178283 67 ntBASIC-5.68□□□□□ -3.32
Ccdc88bQ4QRL3 Gm23790-201ENSMUST00000083013 107 ntBASIC-5.68□□□□□ -3.32
Ccdc88bQ4QRL3 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.7□□□□□ -3.32
Ccdc88bQ4QRL3 Gm22951-201ENSMUST00000179471 107 ntBASIC-5.71□□□□□ -3.32
Ccdc88bQ4QRL3 Gm23209-201ENSMUST00000158667 110 ntBASIC-5.71□□□□□ -3.32
Ccdc88bQ4QRL3 Gm23649-201ENSMUST00000179007 107 ntBASIC-5.73□□□□□ -3.33
Ccdc88bQ4QRL3 Gm22349-201ENSMUST00000157864 107 ntBASIC-5.74□□□□□ -3.33
Ccdc88bQ4QRL3 Gm23990-201ENSMUST00000117031 117 ntBASIC-5.76□□□□□ -3.33
Ccdc88bQ4QRL3 Mir466e-201ENSMUST00000198862 84 ntBASIC-5.76□□□□□ -3.33
Ccdc88bQ4QRL3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-5.76□□□□□ -3.33
Ccdc88bQ4QRL3 Gm23258-201ENSMUST00000158319 106 ntBASIC-5.77□□□□□ -3.33
Ccdc88bQ4QRL3 Gm20305-201ENSMUST00000193226 177 ntBASIC-5.77□□□□□ -3.33
Retrieved 100 of 76,532 protein–RNA pairs in 156.2 ms