Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.87□□□□□ -2.55
Trafd1Q3UDK1 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.87□□□□□ -2.55
Trafd1Q3UDK1 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.87□□□□□ -2.55
Trafd1Q3UDK1 Mir702-201ENSMUST00000102285 109 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.88□□□□□ -2.55
Trafd1Q3UDK1 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.89□□□□□ -2.55
Trafd1Q3UDK1 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.89□□□□□ -2.55
Trafd1Q3UDK1 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.9□□□□□ -2.55
Trafd1Q3UDK1 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.91□□□□□ -2.56
Trafd1Q3UDK1 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.91□□□□□ -2.56
Trafd1Q3UDK1 Mir136-201ENSMUST00000199494 62 ntBASIC-0.91□□□□□ -2.56
Trafd1Q3UDK1 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.91□□□□□ -2.56
Trafd1Q3UDK1 Mir876-201ENSMUST00000104659 81 ntBASIC-0.92□□□□□ -2.56
Trafd1Q3UDK1 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.92□□□□□ -2.56
Trafd1Q3UDK1 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.93□□□□□ -2.56
Trafd1Q3UDK1 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.93□□□□□ -2.56
Trafd1Q3UDK1 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.93□□□□□ -2.56
Trafd1Q3UDK1 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.93□□□□□ -2.56
Trafd1Q3UDK1 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.94□□□□□ -2.56
Trafd1Q3UDK1 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.95□□□□□ -2.56
Trafd1Q3UDK1 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.95□□□□□ -2.56
Trafd1Q3UDK1 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.95□□□□□ -2.56
Trafd1Q3UDK1 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.95□□□□□ -2.56
Trafd1Q3UDK1 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
Trafd1Q3UDK1 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.96□□□□□ -2.56
Trafd1Q3UDK1 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.96□□□□□ -2.56
Trafd1Q3UDK1 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.97□□□□□ -2.56
Trafd1Q3UDK1 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.97□□□□□ -2.56
Trafd1Q3UDK1 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.97□□□□□ -2.56
Trafd1Q3UDK1 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.97□□□□□ -2.56
Trafd1Q3UDK1 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.97□□□□□ -2.56
Trafd1Q3UDK1 Snord8-201ENSMUST00000175303 110 ntBASIC-0.98□□□□□ -2.57
Trafd1Q3UDK1 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.98□□□□□ -2.57
Trafd1Q3UDK1 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.99□□□□□ -2.57
Trafd1Q3UDK1 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.99□□□□□ -2.57
Trafd1Q3UDK1 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.99□□□□□ -2.57
Trafd1Q3UDK1 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.99□□□□□ -2.57
Trafd1Q3UDK1 Gm25712-201ENSMUST00000158634 93 ntBASIC-1□□□□□ -2.57
Trafd1Q3UDK1 Mir6339-201ENSMUST00000185120 117 ntBASIC-1□□□□□ -2.57
Trafd1Q3UDK1 Gm44589-201ENSMUST00000207025 115 ntBASIC-1□□□□□ -2.57
Trafd1Q3UDK1 Gm23038-201ENSMUST00000083873 104 ntBASIC-1□□□□□ -2.57
Trafd1Q3UDK1 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Trafd1Q3UDK1 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.01□□□□□ -2.57
Trafd1Q3UDK1 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.01□□□□□ -2.57
Trafd1Q3UDK1 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.01□□□□□ -2.57
Trafd1Q3UDK1 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.02□□□□□ -2.57
Trafd1Q3UDK1 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.02□□□□□ -2.57
Trafd1Q3UDK1 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.02□□□□□ -2.57
Trafd1Q3UDK1 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.02□□□□□ -2.57
Trafd1Q3UDK1 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.02□□□□□ -2.57
Trafd1Q3UDK1 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.03□□□□□ -2.57
Trafd1Q3UDK1 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.03□□□□□ -2.57
Trafd1Q3UDK1 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.04□□□□□ -2.58
Trafd1Q3UDK1 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.05□□□□□ -2.58
Trafd1Q3UDK1 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.05□□□□□ -2.58
Trafd1Q3UDK1 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.05□□□□□ -2.58
Trafd1Q3UDK1 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Snord57-201ENSMUST00000083338 72 ntBASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Mir494-201ENSMUST00000093632 85 ntBASIC-1.06□□□□□ -2.58
Trafd1Q3UDK1 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.07□□□□□ -2.58
Trafd1Q3UDK1 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.08□□□□□ -2.58
Trafd1Q3UDK1 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.08□□□□□ -2.58
Trafd1Q3UDK1 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.08□□□□□ -2.58
Trafd1Q3UDK1 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.08□□□□□ -2.58
Trafd1Q3UDK1 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.09□□□□□ -2.58
Trafd1Q3UDK1 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.09□□□□□ -2.58
Trafd1Q3UDK1 Mir543-201ENSMUST00000102286 76 ntBASIC-1.1□□□□□ -2.59
Trafd1Q3UDK1 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.1□□□□□ -2.59
Trafd1Q3UDK1 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.11□□□□□ -2.59
Trafd1Q3UDK1 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.11□□□□□ -2.59
Trafd1Q3UDK1 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.11□□□□□ -2.59
Trafd1Q3UDK1 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.12□□□□□ -2.59
Trafd1Q3UDK1 Snord123-201ENSMUST00000158692 71 ntBASIC-1.12□□□□□ -2.59
Trafd1Q3UDK1 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.12□□□□□ -2.59
Trafd1Q3UDK1 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.12□□□□□ -2.59
Trafd1Q3UDK1 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.13□□□□□ -2.59
Trafd1Q3UDK1 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.13□□□□□ -2.59
Trafd1Q3UDK1 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.13□□□□□ -2.59
Trafd1Q3UDK1 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.14□□□□□ -2.59
Trafd1Q3UDK1 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms