Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm22335-201ENSMUST00000157724 99 ntBASIC0,77□□□□□ -2,29
Rnf40Q3U319 Gm25787-201ENSMUST00000104709 92 ntBASIC0,76□□□□□ -2,29
Rnf40Q3U319 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0,76□□□□□ -2,29
Rnf40Q3U319 Gm25862-201ENSMUST00000158250 129 ntBASIC0,76□□□□□ -2,29
Rnf40Q3U319 Mir7651-201ENSMUST00000184154 64 ntBASIC0,76□□□□□ -2,29
Rnf40Q3U319 Mir7079-201ENSMUST00000184697 69 ntBASIC0,75□□□□□ -2,29
Rnf40Q3U319 Gm23442-201ENSMUST00000082919 134 ntBASIC0,74□□□□□ -2,29
Rnf40Q3U319 Gm22838-201ENSMUST00000158437 99 ntBASIC0,72□□□□□ -2,29
Rnf40Q3U319 Gm23321-201ENSMUST00000104465 126 ntBASIC0,71□□□□□ -2,3
Rnf40Q3U319 Mir3967-201ENSMUST00000198710 68 ntBASIC0,71□□□□□ -2,3
Rnf40Q3U319 Gm13577-201ENSMUST00000121365 205 ntBASIC0,7□□□□□ -2,3
Rnf40Q3U319 Gm23783-201ENSMUST00000157941 102 ntBASIC0,69□□□□□ -2,3
Rnf40Q3U319 Mir216a-201ENSMUST00000083605 72 ntBASIC0,69□□□□□ -2,3
Rnf40Q3U319 Mir297b-201ENSMUST00000102268 109 ntBASIC0,68□□□□□ -2,3
Rnf40Q3U319 Gm26303-201ENSMUST00000116845 119 ntBASIC0,68□□□□□ -2,3
Rnf40Q3U319 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0,68□□□□□ -2,3
Rnf40Q3U319 Gm23159-201ENSMUST00000175088 77 ntBASIC0,68□□□□□ -2,3
Rnf40Q3U319 Mir295-201ENSMUST00000104694 69 ntBASIC0,67□□□□□ -2,3
Rnf40Q3U319 Gm23008-201ENSMUST00000158946 80 ntBASIC0,67□□□□□ -2,3
Rnf40Q3U319 Gm25023-201ENSMUST00000082977 107 ntBASIC0,67□□□□□ -2,3
Rnf40Q3U319 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0,67□□□□□ -2,3
Rnf40Q3U319 Mir344-2-201ENSMUST00000175446 80 ntBASIC0,66□□□□□ -2,3
Rnf40Q3U319 Gm28001-201ENSMUST00000183561 117 ntBASIC0,66□□□□□ -2,3
Rnf40Q3U319 Mir327-201ENSMUST00000199328 69 ntBASIC0,66□□□□□ -2,3
Rnf40Q3U319 Gm25431-201ENSMUST00000101978 107 ntBASIC0,64□□□□□ -2,31
Rnf40Q3U319 Gm23126-201ENSMUST00000104260 134 ntBASIC0,64□□□□□ -2,31
Rnf40Q3U319 Gm22232-201ENSMUST00000104654 94 ntBASIC0,64□□□□□ -2,31
Rnf40Q3U319 Gm24772-201ENSMUST00000158507 110 ntBASIC0,63□□□□□ -2,31
Rnf40Q3U319 Gm20473-201ENSMUST00000173064 112 ntBASIC0,63□□□□□ -2,31
Rnf40Q3U319 Gm24323-201ENSMUST00000175342 77 ntBASIC0,63□□□□□ -2,31
Rnf40Q3U319 Mir219b-201ENSMUST00000198317 65 ntBASIC0,63□□□□□ -2,31
Rnf40Q3U319 Gm24843-201ENSMUST00000158682 76 ntBASIC0,62□□□□□ -2,31
Rnf40Q3U319 Gm24194-201ENSMUST00000116805 90 ntBASIC0,61□□□□□ -2,31
Rnf40Q3U319 Gm25388-201ENSMUST00000157339 151 ntBASIC0,6□□□□□ -2,31
Rnf40Q3U319 Mir3109-201ENSMUST00000175301 88 ntBASIC0,6□□□□□ -2,31
Rnf40Q3U319 Gm24445-201ENSMUST00000083981 107 ntBASIC0,6□□□□□ -2,31
Rnf40Q3U319 Gm22340-201ENSMUST00000157717 114 ntBASIC0,59□□□□□ -2,31
Rnf40Q3U319 Gm23821-201ENSMUST00000158738 106 ntBASIC0,59□□□□□ -2,31
Rnf40Q3U319 Mir466q-201ENSMUST00000175249 76 ntBASIC0,57□□□□□ -2,32
Rnf40Q3U319 Gm26285-201ENSMUST00000177923 107 ntBASIC0,57□□□□□ -2,32
Rnf40Q3U319 Gm23622-201ENSMUST00000082460 107 ntBASIC0,57□□□□□ -2,32
Rnf40Q3U319 Gm25247-201ENSMUST00000175475 90 ntBASIC0,55□□□□□ -2,32
Rnf40Q3U319 Gm27475-201ENSMUST00000183420 61 ntBASIC0,55□□□□□ -2,32
Rnf40Q3U319 Scarna8-201ENSMUST00000158333 131 ntBASIC0,54□□□□□ -2,32
Rnf40Q3U319 Gm44328-201ENSMUST00000199331 75 ntBASIC0,54□□□□□ -2,32
Rnf40Q3U319 Gm23909-201ENSMUST00000104598 131 ntBASIC0,53□□□□□ -2,32
Rnf40Q3U319 Gm23605-201ENSMUST00000157255 127 ntBASIC0,53□□□□□ -2,32
Rnf40Q3U319 Gm43432-201ENSMUST00000196352 121 ntBASIC0,53□□□□□ -2,32
Rnf40Q3U319 Snord91a-201ENSMUST00000104305 93 ntBASIC0,51□□□□□ -2,33
Rnf40Q3U319 Snord42b-201ENSMUST00000083742 69 ntBASIC0,5□□□□□ -2,33
Rnf40Q3U319 Gm24971-201ENSMUST00000175581 110 ntBASIC0,49□□□□□ -2,33
Rnf40Q3U319 Gm25510-201ENSMUST00000116986 123 ntBASIC0,47□□□□□ -2,33
Rnf40Q3U319 Mir669m-2-201ENSMUST00000158355 98 ntBASIC0,45□□□□□ -2,34
Rnf40Q3U319 Mir8107-201ENSMUST00000184024 117 ntBASIC0,45□□□□□ -2,34
Rnf40Q3U319 Mir18b-201ENSMUST00000103923 83 ntBASIC0,42□□□□□ -2,34
Rnf40Q3U319 Gm22305-201ENSMUST00000082690 108 ntBASIC0,42□□□□□ -2,34
Rnf40Q3U319 Gm22759-201ENSMUST00000102276 96 ntBASIC0,41□□□□□ -2,34
Rnf40Q3U319 Gm27607-201ENSMUST00000185162 122 ntBASIC0,41□□□□□ -2,34
Rnf40Q3U319 Gm22197-201ENSMUST00000116866 58 ntBASIC0,4□□□□□ -2,35
Rnf40Q3U319 Gm25995-201ENSMUST00000175396 142 ntBASIC0,4□□□□□ -2,35
Rnf40Q3U319 Gm42773-201ENSMUST00000196962 148 ntBASIC0,39□□□□□ -2,35
Rnf40Q3U319 Gm22925-201ENSMUST00000174956 102 ntBASIC0,38□□□□□ -2,35
Rnf40Q3U319 Gm44375-201ENSMUST00000196657 150 ntBASIC0,38□□□□□ -2,35
Rnf40Q3U319 Gm24833-201ENSMUST00000116775 120 ntBASIC0,37□□□□□ -2,35
Rnf40Q3U319 Mir5124a-201ENSMUST00000175528 72 ntBASIC0,37□□□□□ -2,35
Rnf40Q3U319 Gm44347-201ENSMUST00000199602 108 ntBASIC0,37□□□□□ -2,35
Rnf40Q3U319 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0,37□□□□□ -2,35
Rnf40Q3U319 Mir669f-201ENSMUST00000103850 121 ntBASIC0,36□□□□□ -2,35
Rnf40Q3U319 Gm23994-201ENSMUST00000158059 88 ntBASIC0,36□□□□□ -2,35
Rnf40Q3U319 Gm25375-201ENSMUST00000158157 135 ntBASIC0,36□□□□□ -2,35
Rnf40Q3U319 Gm26210-201ENSMUST00000158680 91 ntBASIC0,36□□□□□ -2,35
Rnf40Q3U319 Snord85-201ENSMUST00000083262 73 ntBASIC0,35□□□□□ -2,35
Rnf40Q3U319 Mir7077-201ENSMUST00000183991 57 ntBASIC0,34□□□□□ -2,36
Rnf40Q3U319 Mir136-201ENSMUST00000199494 62 ntBASIC0,34□□□□□ -2,36
Rnf40Q3U319 Gm26152-201ENSMUST00000157427 101 ntBASIC0,33□□□□□ -2,36
Rnf40Q3U319 Snord58b-201ENSMUST00000082937 66 ntBASIC0,33□□□□□ -2,36
Rnf40Q3U319 Gm23315-201ENSMUST00000158003 109 ntBASIC0,32□□□□□ -2,36
Rnf40Q3U319 Gm25049-201ENSMUST00000158597 73 ntBASIC0,32□□□□□ -2,36
Rnf40Q3U319 Gm24097-201ENSMUST00000178720 107 ntBASIC0,32□□□□□ -2,36
Rnf40Q3U319 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0,32□□□□□ -2,36
Rnf40Q3U319 Gm22327-201ENSMUST00000158899 108 ntBASIC0,31□□□□□ -2,36
Rnf40Q3U319 Gm26116-201ENSMUST00000175600 77 ntBASIC0,31□□□□□ -2,36
Rnf40Q3U319 Gm44828-201ENSMUST00000203745 106 ntBASIC0,31□□□□□ -2,36
Rnf40Q3U319 Gm23531-201ENSMUST00000104567 68 ntBASIC0,3□□□□□ -2,36
Rnf40Q3U319 Gm23811-201ENSMUST00000175155 84 ntBASIC0,3□□□□□ -2,36
Rnf40Q3U319 Gm25497-201ENSMUST00000104425 132 ntBASIC0,28□□□□□ -2,36
Rnf40Q3U319 Gm22602-201ENSMUST00000157596 95 ntBASIC0,28□□□□□ -2,36
Rnf40Q3U319 Mir6365-201ENSMUST00000183990 101 ntBASIC0,28□□□□□ -2,36
Rnf40Q3U319 Gm24336-201ENSMUST00000104203 146 ntBASIC0,27□□□□□ -2,37
Rnf40Q3U319 Gm24467-201ENSMUST00000157887 126 ntBASIC0,27□□□□□ -2,37
Rnf40Q3U319 Gm23278-201ENSMUST00000157911 143 ntBASIC0,27□□□□□ -2,37
Rnf40Q3U319 Gm25249-201ENSMUST00000175471 78 ntBASIC0,27□□□□□ -2,37
Rnf40Q3U319 AC167019.1-201ENSMUST00000227913 106 ntBASIC0,27□□□□□ -2,37
Rnf40Q3U319 Gm22088-201ENSMUST00000158341 117 ntBASIC0,26□□□□□ -2,37
Rnf40Q3U319 Gm25952-201ENSMUST00000175329 74 ntBASIC0,26□□□□□ -2,37
Rnf40Q3U319 Mir710-201ENSMUST00000102088 110 ntBASIC0,25□□□□□ -2,37
Rnf40Q3U319 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0,25□□□□□ -2,37
Rnf40Q3U319 n-R5s18-201ENSMUST00000122740 121 ntBASIC0,25□□□□□ -2,37
Rnf40Q3U319 Gm25885-201ENSMUST00000157779 109 ntBASIC0,25□□□□□ -2,37
Rnf40Q3U319 Gm25137-201ENSMUST00000083251 110 ntBASIC0,24□□□□□ -2,37
Retrieved 100 of 76,532 protein–RNA pairs in 147,3 ms