Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm27798-201ENSMUST00000184989 71 ntBASIC0.47□□□□□ -2.33
Col8a1Q00780 Gm22879-201ENSMUST00000082895 74 ntBASIC0.47□□□□□ -2.33
Col8a1Q00780 Gm37832-201ENSMUST00000118935 189 ntBASIC0.46□□□□□ -2.34
Col8a1Q00780 Gm25886-201ENSMUST00000157780 114 ntBASIC0.46□□□□□ -2.34
Col8a1Q00780 Gm22157-201ENSMUST00000158410 104 ntBASIC0.46□□□□□ -2.34
Col8a1Q00780 Gm38208-201ENSMUST00000192476 114 ntBASIC0.46□□□□□ -2.34
Col8a1Q00780 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.46□□□□□ -2.34
Col8a1Q00780 Gm27749-201ENSMUST00000183651 125 ntBASIC0.45□□□□□ -2.34
Col8a1Q00780 Mir1955-201ENSMUST00000158014 98 ntBASIC0.44□□□□□ -2.34
Col8a1Q00780 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.44□□□□□ -2.34
Col8a1Q00780 Gm23240-201ENSMUST00000083009 121 ntBASIC0.44□□□□□ -2.34
Col8a1Q00780 Gm24793-201ENSMUST00000104289 132 ntBASIC0.43□□□□□ -2.34
Col8a1Q00780 Gm43432-201ENSMUST00000196352 121 ntBASIC0.43□□□□□ -2.34
Col8a1Q00780 Gm25791-201ENSMUST00000083292 137 ntBASIC0.43□□□□□ -2.34
Col8a1Q00780 Gm24381-201ENSMUST00000122697 104 ntBASIC0.42□□□□□ -2.34
Col8a1Q00780 Gm22838-201ENSMUST00000158437 99 ntBASIC0.42□□□□□ -2.34
Col8a1Q00780 Mir1948-201ENSMUST00000157325 85 ntBASIC0.41□□□□□ -2.34
Col8a1Q00780 Gm22335-201ENSMUST00000157724 99 ntBASIC0.41□□□□□ -2.34
Col8a1Q00780 Gm44828-201ENSMUST00000203745 106 ntBASIC0.41□□□□□ -2.34
Col8a1Q00780 Gm25158-201ENSMUST00000177681 121 ntBASIC0.4□□□□□ -2.35
Col8a1Q00780 Gm26229-201ENSMUST00000179699 121 ntBASIC0.4□□□□□ -2.35
Col8a1Q00780 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.39□□□□□ -2.35
Col8a1Q00780 Gm28001-201ENSMUST00000183561 117 ntBASIC0.38□□□□□ -2.35
Col8a1Q00780 Mir7651-201ENSMUST00000184154 64 ntBASIC0.38□□□□□ -2.35
Col8a1Q00780 Gm23607-201ENSMUST00000104550 126 ntBASIC0.37□□□□□ -2.35
Col8a1Q00780 Gm23159-201ENSMUST00000175088 77 ntBASIC0.37□□□□□ -2.35
Col8a1Q00780 Gm24459-201ENSMUST00000082730 86 ntBASIC0.37□□□□□ -2.35
Col8a1Q00780 Scarna8-201ENSMUST00000158333 131 ntBASIC0.36□□□□□ -2.35
Col8a1Q00780 Gm23442-201ENSMUST00000082919 134 ntBASIC0.36□□□□□ -2.35
Col8a1Q00780 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Col8a1Q00780 Mir702-201ENSMUST00000102285 109 ntBASIC0.34□□□□□ -2.36
Col8a1Q00780 Gm27475-201ENSMUST00000183420 61 ntBASIC0.34□□□□□ -2.36
Col8a1Q00780 Gm27784-201ENSMUST00000184926 113 ntBASIC0.33□□□□□ -2.36
Col8a1Q00780 Gm22301-201ENSMUST00000082656 107 ntBASIC0.33□□□□□ -2.36
Col8a1Q00780 Mir710-201ENSMUST00000102088 110 ntBASIC0.32□□□□□ -2.36
Col8a1Q00780 Gm24843-201ENSMUST00000158682 76 ntBASIC0.32□□□□□ -2.36
Col8a1Q00780 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.32□□□□□ -2.36
Col8a1Q00780 Gm44328-201ENSMUST00000199331 75 ntBASIC0.32□□□□□ -2.36
Col8a1Q00780 Gm23749-201ENSMUST00000104223 131 ntBASIC0.31□□□□□ -2.36
Col8a1Q00780 Gm24651-201ENSMUST00000157107 107 ntBASIC0.31□□□□□ -2.36
Col8a1Q00780 Gm23821-201ENSMUST00000158738 106 ntBASIC0.31□□□□□ -2.36
Col8a1Q00780 Mir3967-201ENSMUST00000198710 68 ntBASIC0.31□□□□□ -2.36
Col8a1Q00780 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0.3□□□□□ -2.36
Col8a1Q00780 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Col8a1Q00780 Gm25903-201ENSMUST00000158492 103 ntBASIC0.3□□□□□ -2.36
Col8a1Q00780 Mir327-201ENSMUST00000199328 69 ntBASIC0.3□□□□□ -2.36
Col8a1Q00780 Gm23992-201ENSMUST00000174981 67 ntBASIC0.29□□□□□ -2.36
Col8a1Q00780 Mir3089-201ENSMUST00000175350 84 ntBASIC0.29□□□□□ -2.36
Col8a1Q00780 Gm22260-201ENSMUST00000178643 107 ntBASIC0.29□□□□□ -2.36
Col8a1Q00780 Mir8107-201ENSMUST00000184024 117 ntBASIC0.28□□□□□ -2.36
Col8a1Q00780 Gm25132-201ENSMUST00000082652 107 ntBASIC0.28□□□□□ -2.36
Col8a1Q00780 Gm22759-201ENSMUST00000102276 96 ntBASIC0.27□□□□□ -2.37
Col8a1Q00780 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col8a1Q00780 Gm25108-201ENSMUST00000122473 78 ntBASIC0.27□□□□□ -2.37
Col8a1Q00780 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.27□□□□□ -2.37
Col8a1Q00780 Gm37646-201ENSMUST00000191756 111 ntBASIC0.26□□□□□ -2.37
Col8a1Q00780 Gm24833-201ENSMUST00000116775 120 ntBASIC0.25□□□□□ -2.37
Col8a1Q00780 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Col8a1Q00780 Gm22056-201ENSMUST00000083386 81 ntBASIC0.25□□□□□ -2.37
Col8a1Q00780 Gm23483-201ENSMUST00000104179 108 ntBASIC0.24□□□□□ -2.37
Col8a1Q00780 Gm26152-201ENSMUST00000157427 101 ntBASIC0.24□□□□□ -2.37
Col8a1Q00780 Gm22962-201ENSMUST00000157962 73 ntBASIC0.24□□□□□ -2.37
Col8a1Q00780 Gm25510-201ENSMUST00000116986 123 ntBASIC0.23□□□□□ -2.37
Col8a1Q00780 Gm24903-201ENSMUST00000158131 126 ntBASIC0.23□□□□□ -2.37
Col8a1Q00780 Gm25862-201ENSMUST00000158250 129 ntBASIC0.23□□□□□ -2.37
Col8a1Q00780 Gm22550-201ENSMUST00000179774 107 ntBASIC0.23□□□□□ -2.37
Col8a1Q00780 Gm22060-201ENSMUST00000082558 107 ntBASIC0.23□□□□□ -2.37
Col8a1Q00780 Gm45688-201ENSMUST00000210002 101 ntBASIC0.22□□□□□ -2.37
Col8a1Q00780 Gm44375-201ENSMUST00000196657 150 ntBASIC0.21□□□□□ -2.38
Col8a1Q00780 Mir297b-201ENSMUST00000102268 109 ntBASIC0.2□□□□□ -2.38
Col8a1Q00780 Gm24372-201ENSMUST00000104400 110 ntBASIC0.2□□□□□ -2.38
Col8a1Q00780 Gm24971-201ENSMUST00000175581 110 ntBASIC0.2□□□□□ -2.38
Col8a1Q00780 Mir191-201ENSMUST00000196210 74 ntBASIC0.2□□□□□ -2.38
Col8a1Q00780 Snord42b-201ENSMUST00000083742 69 ntBASIC0.2□□□□□ -2.38
Col8a1Q00780 Mir295-201ENSMUST00000104694 69 ntBASIC0.19□□□□□ -2.38
Col8a1Q00780 Snord85-201ENSMUST00000083262 73 ntBASIC0.19□□□□□ -2.38
Col8a1Q00780 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col8a1Q00780 Gm25952-201ENSMUST00000175329 74 ntBASIC0.17□□□□□ -2.38
Col8a1Q00780 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
Col8a1Q00780 Mir6915-201ENSMUST00000198839 69 ntBASIC0.17□□□□□ -2.38
Col8a1Q00780 Gm23909-201ENSMUST00000104598 131 ntBASIC0.16□□□□□ -2.38
Col8a1Q00780 Gm26227-201ENSMUST00000082510 101 ntBASIC0.16□□□□□ -2.38
Col8a1Q00780 Snord91a-201ENSMUST00000104305 93 ntBASIC0.15□□□□□ -2.39
Col8a1Q00780 Gm25431-201ENSMUST00000101978 107 ntBASIC0.13□□□□□ -2.39
Col8a1Q00780 Gm26210-201ENSMUST00000158680 91 ntBASIC0.13□□□□□ -2.39
Col8a1Q00780 Gm25249-201ENSMUST00000175471 78 ntBASIC0.13□□□□□ -2.39
Col8a1Q00780 Gm25137-201ENSMUST00000083251 110 ntBASIC0.13□□□□□ -2.39
Col8a1Q00780 Mir18b-201ENSMUST00000103923 83 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Gm25772-201ENSMUST00000158574 56 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Gm22327-201ENSMUST00000158899 108 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Gm42773-201ENSMUST00000196962 148 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Gm25023-201ENSMUST00000082977 107 ntBASIC0.12□□□□□ -2.39
Col8a1Q00780 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Col8a1Q00780 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.11□□□□□ -2.39
Col8a1Q00780 Gm22368-201ENSMUST00000102416 109 ntBASIC0.1□□□□□ -2.39
Col8a1Q00780 Gm25388-201ENSMUST00000157339 151 ntBASIC0.1□□□□□ -2.39
Col8a1Q00780 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.1□□□□□ -2.39
Col8a1Q00780 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.1□□□□□ -2.39
Col8a1Q00780 Gm22305-201ENSMUST00000082690 108 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms