Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.57□□□□□ -2.66
Ufd1P70362 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.58□□□□□ -2.66
Ufd1P70362 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.59□□□□□ -2.66
Ufd1P70362 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.59□□□□□ -2.66
Ufd1P70362 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.59□□□□□ -2.66
Ufd1P70362 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.59□□□□□ -2.66
Ufd1P70362 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.6□□□□□ -2.67
Ufd1P70362 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.61□□□□□ -2.67
Ufd1P70362 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.61□□□□□ -2.67
Ufd1P70362 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.62□□□□□ -2.67
Ufd1P70362 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.62□□□□□ -2.67
Ufd1P70362 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.63□□□□□ -2.67
Ufd1P70362 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
Ufd1P70362 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.64□□□□□ -2.67
Ufd1P70362 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.65□□□□□ -2.67
Ufd1P70362 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.65□□□□□ -2.67
Ufd1P70362 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.65□□□□□ -2.67
Ufd1P70362 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.65□□□□□ -2.67
Ufd1P70362 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.66□□□□□ -2.68
Ufd1P70362 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.66□□□□□ -2.68
Ufd1P70362 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.66□□□□□ -2.68
Ufd1P70362 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.66□□□□□ -2.68
Ufd1P70362 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-1.67□□□□□ -2.68
Ufd1P70362 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.67□□□□□ -2.68
Ufd1P70362 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.67□□□□□ -2.68
Ufd1P70362 Mir543-201ENSMUST00000102286 76 ntBASIC-1.68□□□□□ -2.68
Ufd1P70362 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.68□□□□□ -2.68
Ufd1P70362 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.68□□□□□ -2.68
Ufd1P70362 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.69□□□□□ -2.68
Ufd1P70362 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.7□□□□□ -2.68
Ufd1P70362 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.7□□□□□ -2.68
Ufd1P70362 Mir876-201ENSMUST00000104659 81 ntBASIC-1.71□□□□□ -2.68
Ufd1P70362 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.71□□□□□ -2.68
Ufd1P70362 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.71□□□□□ -2.68
Ufd1P70362 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.72□□□□□ -2.68
Ufd1P70362 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.73□□□□□ -2.69
Ufd1P70362 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.73□□□□□ -2.69
Ufd1P70362 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.73□□□□□ -2.69
Ufd1P70362 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.73□□□□□ -2.69
Ufd1P70362 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.75□□□□□ -2.69
Ufd1P70362 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.75□□□□□ -2.69
Ufd1P70362 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.75□□□□□ -2.69
Ufd1P70362 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.76□□□□□ -2.69
Ufd1P70362 Snord123-201ENSMUST00000158692 71 ntBASIC-1.76□□□□□ -2.69
Ufd1P70362 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.76□□□□□ -2.69
Ufd1P70362 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.76□□□□□ -2.69
Ufd1P70362 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.77□□□□□ -2.69
Ufd1P70362 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.77□□□□□ -2.69
Ufd1P70362 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.77□□□□□ -2.69
Ufd1P70362 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.79□□□□□ -2.7
Ufd1P70362 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.79□□□□□ -2.7
Ufd1P70362 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.79□□□□□ -2.7
Ufd1P70362 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.79□□□□□ -2.7
Ufd1P70362 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.8□□□□□ -2.7
Ufd1P70362 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.8□□□□□ -2.7
Ufd1P70362 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.8□□□□□ -2.7
Ufd1P70362 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.81□□□□□ -2.7
Ufd1P70362 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.82□□□□□ -2.7
Ufd1P70362 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Ufd1P70362 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.82□□□□□ -2.7
Ufd1P70362 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.83□□□□□ -2.7
Ufd1P70362 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.83□□□□□ -2.7
Ufd1P70362 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.83□□□□□ -2.7
Ufd1P70362 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.84□□□□□ -2.7
Ufd1P70362 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.85□□□□□ -2.71
Ufd1P70362 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.85□□□□□ -2.71
Ufd1P70362 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
Ufd1P70362 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.85□□□□□ -2.71
Ufd1P70362 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
Ufd1P70362 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.86□□□□□ -2.71
Ufd1P70362 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.87□□□□□ -2.71
Ufd1P70362 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.87□□□□□ -2.71
Ufd1P70362 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.88□□□□□ -2.71
Ufd1P70362 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.88□□□□□ -2.71
Ufd1P70362 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.89□□□□□ -2.71
Ufd1P70362 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.91□□□□□ -2.72
Ufd1P70362 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.93□□□□□ -2.72
Ufd1P70362 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.94□□□□□ -2.72
Ufd1P70362 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.94□□□□□ -2.72
Ufd1P70362 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.95□□□□□ -2.72
Ufd1P70362 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
Ufd1P70362 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.97□□□□□ -2.72
Ufd1P70362 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.97□□□□□ -2.72
Ufd1P70362 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.98□□□□□ -2.73
Ufd1P70362 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.99□□□□□ -2.73
Ufd1P70362 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.01□□□□□ -2.73
Ufd1P70362 Gm24148-201ENSMUST00000082762 80 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms