Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.32□□□□□ -2.36
ThraP63058 Gm23994-201ENSMUST00000158059 88 ntBASIC0.31□□□□□ -2.36
ThraP63058 Gm25158-201ENSMUST00000177681 121 ntBASIC0.31□□□□□ -2.36
ThraP63058 Gm26229-201ENSMUST00000179699 121 ntBASIC0.31□□□□□ -2.36
ThraP63058 Gm23442-201ENSMUST00000082919 134 ntBASIC0.31□□□□□ -2.36
ThraP63058 Mir710-201ENSMUST00000102088 110 ntBASIC0.3□□□□□ -2.36
ThraP63058 Mir669f-201ENSMUST00000103850 121 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm22088-201ENSMUST00000158341 117 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm23821-201ENSMUST00000158738 106 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm23159-201ENSMUST00000175088 77 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm27475-201ENSMUST00000183420 61 ntBASIC0.3□□□□□ -2.36
ThraP63058 Mir7651-201ENSMUST00000184154 64 ntBASIC0.3□□□□□ -2.36
ThraP63058 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.3□□□□□ -2.36
ThraP63058 Scarna8-201ENSMUST00000158333 131 ntBASIC0.29□□□□□ -2.36
ThraP63058 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.29□□□□□ -2.36
ThraP63058 Mir6896-201ENSMUST00000198033 73 ntBASIC0.29□□□□□ -2.36
ThraP63058 Mir1955-201ENSMUST00000158014 98 ntBASIC0.28□□□□□ -2.36
ThraP63058 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.28□□□□□ -2.36
ThraP63058 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
ThraP63058 Gm25497-201ENSMUST00000104425 132 ntBASIC0.27□□□□□ -2.37
ThraP63058 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.27□□□□□ -2.37
ThraP63058 Mir1948-201ENSMUST00000157325 85 ntBASIC0.27□□□□□ -2.37
ThraP63058 Gm23278-201ENSMUST00000157911 143 ntBASIC0.27□□□□□ -2.37
ThraP63058 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.27□□□□□ -2.37
ThraP63058 Gm24467-201ENSMUST00000157887 126 ntBASIC0.26□□□□□ -2.37
ThraP63058 Gm24531-201ENSMUST00000157945 100 ntBASIC0.26□□□□□ -2.37
ThraP63058 Gm24843-201ENSMUST00000158682 76 ntBASIC0.26□□□□□ -2.37
ThraP63058 Mir327-201ENSMUST00000199328 69 ntBASIC0.26□□□□□ -2.37
ThraP63058 Gm22127-201ENSMUST00000083239 106 ntBASIC0.26□□□□□ -2.37
ThraP63058 Gm26306-201ENSMUST00000157773 119 ntBASIC0.25□□□□□ -2.37
ThraP63058 Gm27784-201ENSMUST00000184926 113 ntBASIC0.25□□□□□ -2.37
ThraP63058 Mir702-201ENSMUST00000102285 109 ntBASIC0.24□□□□□ -2.37
ThraP63058 Gm44328-201ENSMUST00000199331 75 ntBASIC0.23□□□□□ -2.37
ThraP63058 Gm22879-201ENSMUST00000082895 74 ntBASIC0.23□□□□□ -2.37
ThraP63058 Gm22335-201ENSMUST00000157724 99 ntBASIC0.22□□□□□ -2.37
ThraP63058 Mir8107-201ENSMUST00000184024 117 ntBASIC0.22□□□□□ -2.37
ThraP63058 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
ThraP63058 Gm24459-201ENSMUST00000082730 86 ntBASIC0.19□□□□□ -2.38
ThraP63058 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0.18□□□□□ -2.38
ThraP63058 Gm24651-201ENSMUST00000157107 107 ntBASIC0.18□□□□□ -2.38
ThraP63058 Gm25862-201ENSMUST00000158250 129 ntBASIC0.16□□□□□ -2.38
ThraP63058 Mir3089-201ENSMUST00000175350 84 ntBASIC0.16□□□□□ -2.38
ThraP63058 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
ThraP63058 Snord85-201ENSMUST00000083262 73 ntBASIC0.15□□□□□ -2.39
ThraP63058 Snord42b-201ENSMUST00000083742 69 ntBASIC0.15□□□□□ -2.39
ThraP63058 Gm25510-201ENSMUST00000116986 123 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm25885-201ENSMUST00000157779 109 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm22327-201ENSMUST00000158899 108 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm23992-201ENSMUST00000174981 67 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm25952-201ENSMUST00000175329 74 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm22260-201ENSMUST00000178643 107 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm44375-201ENSMUST00000196657 150 ntBASIC0.14□□□□□ -2.39
ThraP63058 Gm26210-201ENSMUST00000158680 91 ntBASIC0.13□□□□□ -2.39
ThraP63058 Gm25903-201ENSMUST00000158492 103 ntBASIC0.12□□□□□ -2.39
ThraP63058 Gm37646-201ENSMUST00000191756 111 ntBASIC0.12□□□□□ -2.39
ThraP63058 Gm24971-201ENSMUST00000175581 110 ntBASIC0.11□□□□□ -2.39
ThraP63058 Gm22301-201ENSMUST00000082656 107 ntBASIC0.11□□□□□ -2.39
ThraP63058 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
ThraP63058 Gm25886-201ENSMUST00000157780 114 ntBASIC0.1□□□□□ -2.39
ThraP63058 Mir141-201ENSMUST00000083540 72 ntBASIC0.09□□□□□ -2.4
ThraP63058 Snord91a-201ENSMUST00000104305 93 ntBASIC0.08□□□□□ -2.4
ThraP63058 Mir125b-1-201ENSMUST00000175613 77 ntBASIC0.08□□□□□ -2.4
ThraP63058 Gm22056-201ENSMUST00000083386 81 ntBASIC0.08□□□□□ -2.4
ThraP63058 Gm22368-201ENSMUST00000102416 109 ntBASIC0.07□□□□□ -2.4
ThraP63058 Gm23749-201ENSMUST00000104223 131 ntBASIC0.07□□□□□ -2.4
ThraP63058 Gm24793-201ENSMUST00000104289 132 ntBASIC0.06□□□□□ -2.4
ThraP63058 Gm23909-201ENSMUST00000104598 131 ntBASIC0.06□□□□□ -2.4
ThraP63058 Gm22550-201ENSMUST00000179774 107 ntBASIC0.06□□□□□ -2.4
ThraP63058 Gm22060-201ENSMUST00000082558 107 ntBASIC0.06□□□□□ -2.4
ThraP63058 Gm25132-201ENSMUST00000082652 107 ntBASIC0.06□□□□□ -2.4
ThraP63058 Gm25249-201ENSMUST00000175471 78 ntBASIC0.05□□□□□ -2.4
ThraP63058 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
ThraP63058 Gm23483-201ENSMUST00000104179 108 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
ThraP63058 Gm24903-201ENSMUST00000158131 126 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm42773-201ENSMUST00000196962 148 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm26227-201ENSMUST00000082510 101 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm22305-201ENSMUST00000082690 108 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm25023-201ENSMUST00000082977 107 ntBASIC0.04□□□□□ -2.4
ThraP63058 Gm25703-201ENSMUST00000083123 151 ntBASIC0.04□□□□□ -2.4
ThraP63058 Mir18b-201ENSMUST00000103923 83 ntBASIC0.03□□□□□ -2.4
ThraP63058 Mir295-201ENSMUST00000104694 69 ntBASIC0.03□□□□□ -2.4
ThraP63058 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.03□□□□□ -2.4
ThraP63058 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.03□□□□□ -2.4
ThraP63058 Mir297b-201ENSMUST00000102268 109 ntBASIC0.02□□□□□ -2.41
ThraP63058 Gm25431-201ENSMUST00000101978 107 ntBASIC0.01□□□□□ -2.41
ThraP63058 Gm24336-201ENSMUST00000104203 146 ntBASIC0.01□□□□□ -2.41
ThraP63058 Gm24372-201ENSMUST00000104400 110 ntBASIC0.01□□□□□ -2.41
ThraP63058 Gm25137-201ENSMUST00000083251 110 ntBASIC0.01□□□□□ -2.41
ThraP63058 Gm24455-201ENSMUST00000083348 131 ntBASIC0.01□□□□□ -2.41
ThraP63058 Mir136-201ENSMUST00000199494 62 ntBASIC0□□□□□ -2.41
ThraP63058 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.01□□□□□ -2.41
ThraP63058 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.01□□□□□ -2.41
ThraP63058 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.01□□□□□ -2.41
ThraP63058 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.01□□□□□ -2.41
ThraP63058 Mir382-201ENSMUST00000083494 76 ntBASIC-0.01□□□□□ -2.41
ThraP63058 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
ThraP63058 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.03□□□□□ -2.41
ThraP63058 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 298.7 ms