Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm22157-201ENSMUST00000158410 104 ntBASIC0.09□□□□□ -2.4
Shmt1P50431 Gm44375-201ENSMUST00000196657 150 ntBASIC0.09□□□□□ -2.4
Shmt1P50431 Gm22368-201ENSMUST00000102416 109 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm25497-201ENSMUST00000104425 132 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm22327-201ENSMUST00000158899 108 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm23573-201ENSMUST00000104408 107 ntBASIC0.07□□□□□ -2.4
Shmt1P50431 Mir382-201ENSMUST00000083494 76 ntBASIC0.04□□□□□ -2.4
Shmt1P50431 Gm24903-201ENSMUST00000158131 126 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm26210-201ENSMUST00000158680 91 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm24218-201ENSMUST00000180163 105 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm22077-201ENSMUST00000157594 93 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm27798-201ENSMUST00000184989 71 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Shmt1P50431 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Shmt1P50431 Gm22335-201ENSMUST00000157724 99 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Mir3089-201ENSMUST00000175350 84 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Gm25705-201ENSMUST00000083119 104 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Gm25510-201ENSMUST00000116986 123 ntBASIC0□□□□□ -2.41
Shmt1P50431 Gm22401-201ENSMUST00000174927 117 ntBASIC0□□□□□ -2.41
Shmt1P50431 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.02□□□□□ -2.41
Shmt1P50431 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.02□□□□□ -2.41
Shmt1P50431 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.03□□□□□ -2.41
Shmt1P50431 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.03□□□□□ -2.41
Shmt1P50431 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Shmt1P50431 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm25524-201ENSMUST00000101821 107 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.06□□□□□ -2.42
Shmt1P50431 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.06□□□□□ -2.42
Shmt1P50431 Mir702-201ENSMUST00000102285 109 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.1□□□□□ -2.43
Shmt1P50431 Mir672-201ENSMUST00000102331 100 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.12□□□□□ -2.43
Shmt1P50431 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.12□□□□□ -2.43
Shmt1P50431 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Mir141-201ENSMUST00000083540 72 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Shmt1P50431 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.15□□□□□ -2.43
Shmt1P50431 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.15□□□□□ -2.43
Shmt1P50431 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.16□□□□□ -2.44
Shmt1P50431 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Gm26052-201ENSMUST00000104646 84 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Mir191-201ENSMUST00000196210 74 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.21□□□□□ -2.44
Shmt1P50431 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.21□□□□□ -2.44
Shmt1P50431 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.22□□□□□ -2.44
Shmt1P50431 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.22□□□□□ -2.44
Shmt1P50431 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.23□□□□□ -2.45
Shmt1P50431 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.23□□□□□ -2.45
Shmt1P50431 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.24□□□□□ -2.45
Shmt1P50431 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.25□□□□□ -2.45
Shmt1P50431 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.26□□□□□ -2.45
Shmt1P50431 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.26□□□□□ -2.45
Shmt1P50431 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.27□□□□□ -2.45
Shmt1P50431 Mir214-201ENSMUST00000083582 110 ntBASIC-0.27□□□□□ -2.45
Shmt1P50431 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.29□□□□□ -2.46
Shmt1P50431 Gm23961-201ENSMUST00000104685 97 ntBASIC-0.3□□□□□ -2.46
Shmt1P50431 Mir136-201ENSMUST00000199494 62 ntBASIC-0.3□□□□□ -2.46
Shmt1P50431 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.31□□□□□ -2.46
Shmt1P50431 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.31□□□□□ -2.46
Shmt1P50431 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.32□□□□□ -2.46
Shmt1P50431 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.33□□□□□ -2.46
Shmt1P50431 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.34□□□□□ -2.46
Shmt1P50431 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.34□□□□□ -2.46
Shmt1P50431 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.35□□□□□ -2.47
Shmt1P50431 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.35□□□□□ -2.47
Shmt1P50431 Mir96-201ENSMUST00000083652 106 ntBASIC-0.37□□□□□ -2.47
Shmt1P50431 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.38□□□□□ -2.47
Shmt1P50431 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.38□□□□□ -2.47
Shmt1P50431 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.39□□□□□ -2.47
Shmt1P50431 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms