Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.58□□□□□ -2.5
Ercc3P49135 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.58□□□□□ -2.5
Ercc3P49135 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.59□□□□□ -2.5
Ercc3P49135 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Mir96-201ENSMUST00000083652 106 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Mir876-201ENSMUST00000104659 81 ntBASIC-0.65□□□□□ -2.51
Ercc3P49135 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
Ercc3P49135 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.65□□□□□ -2.51
Ercc3P49135 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.67□□□□□ -2.52
Ercc3P49135 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.68□□□□□ -2.52
Ercc3P49135 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.7□□□□□ -2.52
Ercc3P49135 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.7□□□□□ -2.52
Ercc3P49135 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
Ercc3P49135 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Ercc3P49135 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Mir677-202ENSMUST00000197076 78 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.76□□□□□ -2.53
Ercc3P49135 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.8□□□□□ -2.54
Ercc3P49135 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.8□□□□□ -2.54
Ercc3P49135 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Snord57-201ENSMUST00000083338 72 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.84□□□□□ -2.54
Ercc3P49135 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Mir702-201ENSMUST00000102285 109 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.9□□□□□ -2.55
Ercc3P49135 Mir494-201ENSMUST00000093632 85 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 183.4 ms