Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Mir669a-3-201ENSMUST00000102074 109 ntBASIC0.51□□□□□ -2.33
RaraP11416 Gm45617-201ENSMUST00000211132 209 ntBASIC0.51□□□□□ -2.33
RaraP11416 Gm28001-201ENSMUST00000183561 117 ntBASIC0.5□□□□□ -2.33
RaraP11416 Gm23173-201ENSMUST00000157161 160 ntBASIC0.49□□□□□ -2.33
RaraP11416 Gm24508-201ENSMUST00000180104 107 ntBASIC0.49□□□□□ -2.33
RaraP11416 Gm27475-201ENSMUST00000183420 61 ntBASIC0.48□□□□□ -2.33
RaraP11416 Scarna8-201ENSMUST00000158333 131 ntBASIC0.47□□□□□ -2.33
RaraP11416 Gm22838-201ENSMUST00000158437 99 ntBASIC0.47□□□□□ -2.33
RaraP11416 Gm24372-201ENSMUST00000104400 110 ntBASIC0.45□□□□□ -2.34
RaraP11416 Gm38208-201ENSMUST00000192476 114 ntBASIC0.44□□□□□ -2.34
RaraP11416 Mir142b-201ENSMUST00000083486 115 ntBASIC0.44□□□□□ -2.34
RaraP11416 Mir574-201ENSMUST00000103854 78 ntBASIC0.43□□□□□ -2.34
RaraP11416 Gm23159-201ENSMUST00000175088 77 ntBASIC0.43□□□□□ -2.34
RaraP11416 Snord49b-201ENSMUST00000082503 72 ntBASIC0.43□□□□□ -2.34
RaraP11416 Gm23821-201ENSMUST00000158738 106 ntBASIC0.42□□□□□ -2.34
RaraP11416 Gm27749-201ENSMUST00000183651 125 ntBASIC0.42□□□□□ -2.34
RaraP11416 Gm27735-201ENSMUST00000185085 76 ntBASIC0.42□□□□□ -2.34
RaraP11416 Mir191-201ENSMUST00000196210 74 ntBASIC0.42□□□□□ -2.34
RaraP11416 Gm22357-201ENSMUST00000082882 83 ntBASIC0.42□□□□□ -2.34
RaraP11416 Mir3967-201ENSMUST00000198710 68 ntBASIC0.4□□□□□ -2.35
RaraP11416 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
RaraP11416 Gm37832-201ENSMUST00000118935 189 ntBASIC0.39□□□□□ -2.35
RaraP11416 Gm22157-201ENSMUST00000158410 104 ntBASIC0.39□□□□□ -2.35
RaraP11416 Gm23442-201ENSMUST00000082919 134 ntBASIC0.39□□□□□ -2.35
RaraP11416 Mir710-201ENSMUST00000102088 110 ntBASIC0.38□□□□□ -2.35
RaraP11416 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
RaraP11416 Mir7651-201ENSMUST00000184154 64 ntBASIC0.38□□□□□ -2.35
RaraP11416 Gm26052-201ENSMUST00000104646 84 ntBASIC0.37□□□□□ -2.35
RaraP11416 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
RaraP11416 AC160976.1-201ENSMUST00000215092 148 ntBASIC0.37□□□□□ -2.35
RaraP11416 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.36□□□□□ -2.35
RaraP11416 Gm24296-201ENSMUST00000158297 106 ntBASIC0.36□□□□□ -2.35
RaraP11416 Gm24710-201ENSMUST00000175235 101 ntBASIC0.36□□□□□ -2.35
RaraP11416 Gm24135-201ENSMUST00000179085 101 ntBASIC0.36□□□□□ -2.35
RaraP11416 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
RaraP11416 Gm24833-201ENSMUST00000116775 120 ntBASIC0.35□□□□□ -2.35
RaraP11416 Gm24297-201ENSMUST00000158300 68 ntBASIC0.35□□□□□ -2.35
RaraP11416 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.35□□□□□ -2.35
RaraP11416 Mir8107-201ENSMUST00000184024 117 ntBASIC0.35□□□□□ -2.35
RaraP11416 Gm27798-201ENSMUST00000184989 71 ntBASIC0.35□□□□□ -2.35
RaraP11416 Mir6915-201ENSMUST00000198839 69 ntBASIC0.35□□□□□ -2.35
RaraP11416 Gm23690-201ENSMUST00000083036 94 ntBASIC0.35□□□□□ -2.35
RaraP11416 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.34□□□□□ -2.36
RaraP11416 Gm24843-201ENSMUST00000158682 76 ntBASIC0.34□□□□□ -2.36
RaraP11416 Gm25596-201ENSMUST00000178368 107 ntBASIC0.34□□□□□ -2.36
RaraP11416 Gm44328-201ENSMUST00000199331 75 ntBASIC0.34□□□□□ -2.36
RaraP11416 Gm24903-201ENSMUST00000158131 126 ntBASIC0.33□□□□□ -2.36
RaraP11416 Gm23961-201ENSMUST00000104685 97 ntBASIC0.32□□□□□ -2.36
RaraP11416 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
RaraP11416 Gm6607-201ENSMUST00000215035 328 ntBASIC0.32□□□□□ -2.36
RaraP11416 Gm23240-201ENSMUST00000083009 121 ntBASIC0.32□□□□□ -2.36
RaraP11416 Gm24377-201ENSMUST00000104398 131 ntBASIC0.31□□□□□ -2.36
RaraP11416 Mir327-201ENSMUST00000199328 69 ntBASIC0.31□□□□□ -2.36
RaraP11416 Gm25222-201ENSMUST00000158199 126 ntBASIC0.3□□□□□ -2.36
RaraP11416 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC0.3□□□□□ -2.36
RaraP11416 Mir672-201ENSMUST00000102331 100 ntBASIC0.29□□□□□ -2.36
RaraP11416 Gm22335-201ENSMUST00000157724 99 ntBASIC0.29□□□□□ -2.36
RaraP11416 Gm25032-201ENSMUST00000175411 84 ntBASIC0.28□□□□□ -2.36
RaraP11416 AC161271.1-201ENSMUST00000226914 150 ntBASIC0.26□□□□□ -2.37
RaraP11416 Gm23607-201ENSMUST00000104550 126 ntBASIC0.24□□□□□ -2.37
RaraP11416 Gm24587-201ENSMUST00000116697 89 ntBASIC0.24□□□□□ -2.37
RaraP11416 Mir1948-201ENSMUST00000157325 85 ntBASIC0.24□□□□□ -2.37
RaraP11416 Mir6365-201ENSMUST00000183990 101 ntBASIC0.24□□□□□ -2.37
RaraP11416 Gm27610-201ENSMUST00000184026 74 ntBASIC0.24□□□□□ -2.37
RaraP11416 Gm22234-201ENSMUST00000174906 65 ntBASIC0.23□□□□□ -2.37
RaraP11416 Gm25158-201ENSMUST00000177681 121 ntBASIC0.23□□□□□ -2.37
RaraP11416 Gm26229-201ENSMUST00000179699 121 ntBASIC0.23□□□□□ -2.37
RaraP11416 Snora16a-202ENSMUST00000196061 137 ntBASIC0.23□□□□□ -2.37
RaraP11416 Gm25779-201ENSMUST00000116710 95 ntBASIC0.22□□□□□ -2.37
RaraP11416 Gm25952-201ENSMUST00000175329 74 ntBASIC0.22□□□□□ -2.37
RaraP11416 Gm27784-201ENSMUST00000184926 113 ntBASIC0.22□□□□□ -2.37
RaraP11416 Snord85-201ENSMUST00000083262 73 ntBASIC0.22□□□□□ -2.37
RaraP11416 Gm22942-201ENSMUST00000158563 124 ntBASIC0.21□□□□□ -2.38
RaraP11416 Mir382-201ENSMUST00000083494 76 ntBASIC0.21□□□□□ -2.38
RaraP11416 Mir702-201ENSMUST00000102285 109 ntBASIC0.2□□□□□ -2.38
RaraP11416 Gm44375-201ENSMUST00000196657 150 ntBASIC0.2□□□□□ -2.38
RaraP11416 Gm24256-201ENSMUST00000083696 84 ntBASIC0.2□□□□□ -2.38
RaraP11416 Gm23787-201ENSMUST00000122538 73 ntBASIC0.19□□□□□ -2.38
RaraP11416 Gm25510-201ENSMUST00000116986 123 ntBASIC0.18□□□□□ -2.38
RaraP11416 Gm22607-201ENSMUST00000158291 105 ntBASIC0.18□□□□□ -2.38
RaraP11416 Gm26259-201ENSMUST00000104778 97 ntBASIC0.17□□□□□ -2.38
RaraP11416 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0.17□□□□□ -2.38
RaraP11416 Gm22446-201ENSMUST00000180108 104 ntBASIC0.17□□□□□ -2.38
RaraP11416 Gm25388-201ENSMUST00000157339 151 ntBASIC0.16□□□□□ -2.38
RaraP11416 Gm24197-201ENSMUST00000175085 109 ntBASIC0.16□□□□□ -2.38
RaraP11416 Gm22327-201ENSMUST00000158899 108 ntBASIC0.15□□□□□ -2.39
RaraP11416 Gm23812-201ENSMUST00000175156 84 ntBASIC0.15□□□□□ -2.39
RaraP11416 Gm23374-201ENSMUST00000175408 84 ntBASIC0.15□□□□□ -2.39
RaraP11416 Mir214-201ENSMUST00000083582 110 ntBASIC0.13□□□□□ -2.39
RaraP11416 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
RaraP11416 Gm26210-201ENSMUST00000158680 91 ntBASIC0.12□□□□□ -2.39
RaraP11416 Gm24218-201ENSMUST00000180163 105 ntBASIC0.12□□□□□ -2.39
RaraP11416 Snord42b-201ENSMUST00000083742 69 ntBASIC0.12□□□□□ -2.39
RaraP11416 Gm22368-201ENSMUST00000102416 109 ntBASIC0.11□□□□□ -2.39
RaraP11416 Mir145b-201ENSMUST00000184434 75 ntBASIC0.1□□□□□ -2.39
RaraP11416 Mir6964-201ENSMUST00000200252 59 ntBASIC0.08□□□□□ -2.4
RaraP11416 Gm22879-201ENSMUST00000082895 74 ntBASIC0.08□□□□□ -2.4
RaraP11416 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
RaraP11416 Gm24971-201ENSMUST00000175581 110 ntBASIC0.07□□□□□ -2.4
RaraP11416 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms