Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Snord57-201ENSMUST00000083338 72 ntBASIC-1.41□□□□□ -2.64
ClppO88696 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.42□□□□□ -2.64
ClppO88696 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.43□□□□□ -2.64
ClppO88696 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.44□□□□□ -2.64
ClppO88696 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.44□□□□□ -2.64
ClppO88696 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.45□□□□□ -2.64
ClppO88696 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.45□□□□□ -2.64
ClppO88696 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.46□□□□□ -2.64
ClppO88696 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.46□□□□□ -2.64
ClppO88696 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.47□□□□□ -2.64
ClppO88696 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.48□□□□□ -2.65
ClppO88696 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.48□□□□□ -2.65
ClppO88696 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.48□□□□□ -2.65
ClppO88696 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.48□□□□□ -2.65
ClppO88696 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.49□□□□□ -2.65
ClppO88696 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.49□□□□□ -2.65
ClppO88696 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.49□□□□□ -2.65
ClppO88696 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.49□□□□□ -2.65
ClppO88696 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.5□□□□□ -2.65
ClppO88696 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.51□□□□□ -2.65
ClppO88696 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.51□□□□□ -2.65
ClppO88696 Mir876-201ENSMUST00000104659 81 ntBASIC-1.52□□□□□ -2.65
ClppO88696 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.52□□□□□ -2.65
ClppO88696 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.53□□□□□ -2.65
ClppO88696 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.53□□□□□ -2.65
ClppO88696 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.55□□□□□ -2.66
ClppO88696 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.55□□□□□ -2.66
ClppO88696 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.55□□□□□ -2.66
ClppO88696 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.56□□□□□ -2.66
ClppO88696 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.57□□□□□ -2.66
ClppO88696 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.57□□□□□ -2.66
ClppO88696 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.58□□□□□ -2.66
ClppO88696 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.59□□□□□ -2.66
ClppO88696 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.59□□□□□ -2.66
ClppO88696 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.6□□□□□ -2.67
ClppO88696 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.6□□□□□ -2.67
ClppO88696 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.63□□□□□ -2.67
ClppO88696 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
ClppO88696 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.64□□□□□ -2.67
ClppO88696 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.64□□□□□ -2.67
ClppO88696 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.65□□□□□ -2.67
ClppO88696 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.65□□□□□ -2.67
ClppO88696 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.65□□□□□ -2.67
ClppO88696 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.65□□□□□ -2.67
ClppO88696 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.66□□□□□ -2.68
ClppO88696 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.66□□□□□ -2.68
ClppO88696 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.66□□□□□ -2.68
ClppO88696 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.66□□□□□ -2.68
ClppO88696 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.66□□□□□ -2.68
ClppO88696 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.67□□□□□ -2.68
ClppO88696 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.67□□□□□ -2.68
ClppO88696 Mir494-201ENSMUST00000093632 85 ntBASIC-1.67□□□□□ -2.68
ClppO88696 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.68□□□□□ -2.68
ClppO88696 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
ClppO88696 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.69□□□□□ -2.68
ClppO88696 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.7□□□□□ -2.68
ClppO88696 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.7□□□□□ -2.68
ClppO88696 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.71□□□□□ -2.68
ClppO88696 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.71□□□□□ -2.68
ClppO88696 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.71□□□□□ -2.68
ClppO88696 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.71□□□□□ -2.68
ClppO88696 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.71□□□□□ -2.68
ClppO88696 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.73□□□□□ -2.69
ClppO88696 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.73□□□□□ -2.69
ClppO88696 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
ClppO88696 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.74□□□□□ -2.69
ClppO88696 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.74□□□□□ -2.69
ClppO88696 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
ClppO88696 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
ClppO88696 Mir122-201ENSMUST00000083468 66 ntBASIC-1.74□□□□□ -2.69
ClppO88696 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.75□□□□□ -2.69
ClppO88696 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.76□□□□□ -2.69
ClppO88696 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.76□□□□□ -2.69
ClppO88696 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.76□□□□□ -2.69
ClppO88696 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
ClppO88696 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.77□□□□□ -2.69
ClppO88696 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.79□□□□□ -2.7
ClppO88696 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.81□□□□□ -2.7
ClppO88696 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms