Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-0.9□□□□□ -2.55
CtcflA2APF3 Gm24234-201ENSMUST00000104316 107 ntBASIC-0.91□□□□□ -2.56
CtcflA2APF3 Gm25289-201ENSMUST00000122799 119 ntBASIC-0.91□□□□□ -2.56
CtcflA2APF3 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.91□□□□□ -2.56
CtcflA2APF3 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.91□□□□□ -2.56
CtcflA2APF3 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.91□□□□□ -2.56
CtcflA2APF3 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.92□□□□□ -2.56
CtcflA2APF3 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.92□□□□□ -2.56
CtcflA2APF3 Gm23244-201ENSMUST00000083375 92 ntBASIC-0.92□□□□□ -2.56
CtcflA2APF3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
CtcflA2APF3 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.94□□□□□ -2.56
CtcflA2APF3 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.94□□□□□ -2.56
CtcflA2APF3 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.94□□□□□ -2.56
CtcflA2APF3 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.94□□□□□ -2.56
CtcflA2APF3 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.94□□□□□ -2.56
CtcflA2APF3 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.95□□□□□ -2.56
CtcflA2APF3 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.95□□□□□ -2.56
CtcflA2APF3 Gm23644-201ENSMUST00000157856 77 ntBASIC-0.95□□□□□ -2.56
CtcflA2APF3 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.97□□□□□ -2.56
CtcflA2APF3 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.97□□□□□ -2.56
CtcflA2APF3 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.97□□□□□ -2.56
CtcflA2APF3 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.97□□□□□ -2.56
CtcflA2APF3 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.97□□□□□ -2.56
CtcflA2APF3 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.97□□□□□ -2.56
CtcflA2APF3 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.98□□□□□ -2.57
CtcflA2APF3 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm25380-201ENSMUST00000175463 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm24641-201ENSMUST00000178055 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm25484-201ENSMUST00000178217 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm26138-201ENSMUST00000179236 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm22821-201ENSMUST00000179288 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm23298-201ENSMUST00000083181 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.99□□□□□ -2.57
CtcflA2APF3 Gm25601-201ENSMUST00000158356 105 ntBASIC-1□□□□□ -2.57
CtcflA2APF3 Gm25987-201ENSMUST00000083234 107 ntBASIC-1□□□□□ -2.57
CtcflA2APF3 Snord57-201ENSMUST00000083338 72 ntBASIC-1□□□□□ -2.57
CtcflA2APF3 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.01□□□□□ -2.57
CtcflA2APF3 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.01□□□□□ -2.57
CtcflA2APF3 Mir876-201ENSMUST00000104659 81 ntBASIC-1.02□□□□□ -2.57
CtcflA2APF3 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.02□□□□□ -2.57
CtcflA2APF3 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.02□□□□□ -2.57
CtcflA2APF3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.02□□□□□ -2.57
CtcflA2APF3 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.03□□□□□ -2.57
CtcflA2APF3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.03□□□□□ -2.57
CtcflA2APF3 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.03□□□□□ -2.57
CtcflA2APF3 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.04□□□□□ -2.58
CtcflA2APF3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
CtcflA2APF3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
CtcflA2APF3 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.07□□□□□ -2.58
CtcflA2APF3 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.07□□□□□ -2.58
CtcflA2APF3 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.07□□□□□ -2.58
CtcflA2APF3 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.07□□□□□ -2.58
CtcflA2APF3 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.08□□□□□ -2.58
CtcflA2APF3 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.08□□□□□ -2.58
CtcflA2APF3 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.08□□□□□ -2.58
CtcflA2APF3 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.08□□□□□ -2.58
CtcflA2APF3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
CtcflA2APF3 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.1□□□□□ -2.59
CtcflA2APF3 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.1□□□□□ -2.59
CtcflA2APF3 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.1□□□□□ -2.59
CtcflA2APF3 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.11□□□□□ -2.59
CtcflA2APF3 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.11□□□□□ -2.59
CtcflA2APF3 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.12□□□□□ -2.59
CtcflA2APF3 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.13□□□□□ -2.59
CtcflA2APF3 Snord123-201ENSMUST00000158692 71 ntBASIC-1.13□□□□□ -2.59
CtcflA2APF3 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.13□□□□□ -2.59
CtcflA2APF3 Mir543-201ENSMUST00000102286 76 ntBASIC-1.14□□□□□ -2.59
CtcflA2APF3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.14□□□□□ -2.59
CtcflA2APF3 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.14□□□□□ -2.59
CtcflA2APF3 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.14□□□□□ -2.59
CtcflA2APF3 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.14□□□□□ -2.59
CtcflA2APF3 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Mir494-201ENSMUST00000093632 85 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.15□□□□□ -2.59
CtcflA2APF3 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.16□□□□□ -2.6
CtcflA2APF3 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.16□□□□□ -2.6
CtcflA2APF3 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms