Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.07□□□□□ -2.58
Trim3Q9R1R2 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.08□□□□□ -2.58
Trim3Q9R1R2 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.08□□□□□ -2.58
Trim3Q9R1R2 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.08□□□□□ -2.58
Trim3Q9R1R2 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.08□□□□□ -2.58
Trim3Q9R1R2 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.09□□□□□ -2.58
Trim3Q9R1R2 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.09□□□□□ -2.58
Trim3Q9R1R2 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.09□□□□□ -2.58
Trim3Q9R1R2 Gm25812-201ENSMUST00000082751 103 ntBASIC-1.09□□□□□ -2.58
Trim3Q9R1R2 Gm23138-201ENSMUST00000083365 103 ntBASIC-1.09□□□□□ -2.58
Trim3Q9R1R2 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.1□□□□□ -2.59
Trim3Q9R1R2 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.1□□□□□ -2.59
Trim3Q9R1R2 Gm23017-201ENSMUST00000177583 72 ntBASIC-1.1□□□□□ -2.59
Trim3Q9R1R2 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.1□□□□□ -2.59
Trim3Q9R1R2 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.11□□□□□ -2.59
Trim3Q9R1R2 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.11□□□□□ -2.59
Trim3Q9R1R2 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.11□□□□□ -2.59
Trim3Q9R1R2 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.11□□□□□ -2.59
Trim3Q9R1R2 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.12□□□□□ -2.59
Trim3Q9R1R2 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-1.12□□□□□ -2.59
Trim3Q9R1R2 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.13□□□□□ -2.59
Trim3Q9R1R2 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.13□□□□□ -2.59
Trim3Q9R1R2 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.13□□□□□ -2.59
Trim3Q9R1R2 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.14□□□□□ -2.59
Trim3Q9R1R2 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.14□□□□□ -2.59
Trim3Q9R1R2 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.14□□□□□ -2.59
Trim3Q9R1R2 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.14□□□□□ -2.59
Trim3Q9R1R2 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.14□□□□□ -2.59
Trim3Q9R1R2 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.15□□□□□ -2.59
Trim3Q9R1R2 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.15□□□□□ -2.59
Trim3Q9R1R2 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.16□□□□□ -2.6
Trim3Q9R1R2 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.16□□□□□ -2.6
Trim3Q9R1R2 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.16□□□□□ -2.6
Trim3Q9R1R2 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.16□□□□□ -2.6
Trim3Q9R1R2 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.16□□□□□ -2.6
Trim3Q9R1R2 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.17□□□□□ -2.6
Trim3Q9R1R2 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.18□□□□□ -2.6
Trim3Q9R1R2 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.18□□□□□ -2.6
Trim3Q9R1R2 Snord57-201ENSMUST00000083338 72 ntBASIC-1.18□□□□□ -2.6
Trim3Q9R1R2 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.19□□□□□ -2.6
Trim3Q9R1R2 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.2□□□□□ -2.6
Trim3Q9R1R2 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.2□□□□□ -2.6
Trim3Q9R1R2 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.2□□□□□ -2.6
Trim3Q9R1R2 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.2□□□□□ -2.6
Trim3Q9R1R2 Gm23790-201ENSMUST00000083013 107 ntBASIC-1.21□□□□□ -2.6
Trim3Q9R1R2 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.22□□□□□ -2.6
Trim3Q9R1R2 Gm25440-201ENSMUST00000158279 154 ntBASIC-1.22□□□□□ -2.6
Trim3Q9R1R2 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.22□□□□□ -2.6
Trim3Q9R1R2 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.22□□□□□ -2.6
Trim3Q9R1R2 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.23□□□□□ -2.61
Trim3Q9R1R2 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.23□□□□□ -2.61
Trim3Q9R1R2 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.23□□□□□ -2.61
Trim3Q9R1R2 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
Trim3Q9R1R2 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
Trim3Q9R1R2 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.24□□□□□ -2.61
Trim3Q9R1R2 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.25□□□□□ -2.61
Trim3Q9R1R2 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.25□□□□□ -2.61
Trim3Q9R1R2 Snora2b-201ENSMUST00000084005 137 ntBASIC-1.25□□□□□ -2.61
Trim3Q9R1R2 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.26□□□□□ -2.61
Trim3Q9R1R2 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.26□□□□□ -2.61
Trim3Q9R1R2 Mir136-201ENSMUST00000199494 62 ntBASIC-1.26□□□□□ -2.61
Trim3Q9R1R2 Mir543-201ENSMUST00000102286 76 ntBASIC-1.27□□□□□ -2.61
Trim3Q9R1R2 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.27□□□□□ -2.61
Trim3Q9R1R2 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.27□□□□□ -2.61
Trim3Q9R1R2 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.27□□□□□ -2.61
Trim3Q9R1R2 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.28□□□□□ -2.61
Trim3Q9R1R2 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.28□□□□□ -2.61
Trim3Q9R1R2 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.28□□□□□ -2.61
Trim3Q9R1R2 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.29□□□□□ -2.62
Trim3Q9R1R2 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 191.4 ms