Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.37□□□□□ -2.47
Trim54Q9ERP3 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.39□□□□□ -2.47
Trim54Q9ERP3 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.42□□□□□ -2.48
Trim54Q9ERP3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Mir717-201ENSMUST00000102259 109 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.46□□□□□ -2.48
Trim54Q9ERP3 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.46□□□□□ -2.48
Trim54Q9ERP3 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.47□□□□□ -2.48
Trim54Q9ERP3 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.47□□□□□ -2.48
Trim54Q9ERP3 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Mir96-201ENSMUST00000083652 106 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.53□□□□□ -2.49
Trim54Q9ERP3 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.53□□□□□ -2.49
Trim54Q9ERP3 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.55□□□□□ -2.5
Trim54Q9ERP3 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.55□□□□□ -2.5
Trim54Q9ERP3 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.56□□□□□ -2.5
Trim54Q9ERP3 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.56□□□□□ -2.5
Trim54Q9ERP3 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.57□□□□□ -2.5
Trim54Q9ERP3 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.57□□□□□ -2.5
Trim54Q9ERP3 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.6□□□□□ -2.51
Trim54Q9ERP3 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Mir183-201ENSMUST00000083685 70 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.63□□□□□ -2.51
Trim54Q9ERP3 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.65□□□□□ -2.51
Trim54Q9ERP3 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.65□□□□□ -2.51
Trim54Q9ERP3 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Mir876-201ENSMUST00000104659 81 ntBASIC-0.67□□□□□ -2.52
Trim54Q9ERP3 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.67□□□□□ -2.52
Trim54Q9ERP3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.69□□□□□ -2.52
Trim54Q9ERP3 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.69□□□□□ -2.52
Trim54Q9ERP3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 264.8 ms