Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24070-201ENSMUST00000104519 130 ntBASIC-1.24□□□□□ -2.61
Scn4aQ9ER60 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.24□□□□□ -2.61
Scn4aQ9ER60 Gm22490-201ENSMUST00000157188 119 ntBASIC-1.24□□□□□ -2.61
Scn4aQ9ER60 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.25□□□□□ -2.61
Scn4aQ9ER60 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.26□□□□□ -2.61
Scn4aQ9ER60 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.26□□□□□ -2.61
Scn4aQ9ER60 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.27□□□□□ -2.61
Scn4aQ9ER60 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.27□□□□□ -2.61
Scn4aQ9ER60 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.27□□□□□ -2.61
Scn4aQ9ER60 Mir136-201ENSMUST00000199494 62 ntBASIC-1.27□□□□□ -2.61
Scn4aQ9ER60 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.28□□□□□ -2.61
Scn4aQ9ER60 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.29□□□□□ -2.62
Scn4aQ9ER60 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.29□□□□□ -2.62
Scn4aQ9ER60 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.3□□□□□ -2.62
Scn4aQ9ER60 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.3□□□□□ -2.62
Scn4aQ9ER60 Gm22459-201ENSMUST00000082577 108 ntBASIC-1.3□□□□□ -2.62
Scn4aQ9ER60 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.31□□□□□ -2.62
Scn4aQ9ER60 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.31□□□□□ -2.62
Scn4aQ9ER60 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.32□□□□□ -2.62
Scn4aQ9ER60 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.32□□□□□ -2.62
Scn4aQ9ER60 Gm23017-201ENSMUST00000177583 72 ntBASIC-1.33□□□□□ -2.62
Scn4aQ9ER60 Mir543-201ENSMUST00000102286 76 ntBASIC-1.33□□□□□ -2.62
Scn4aQ9ER60 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.33□□□□□ -2.62
Scn4aQ9ER60 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.33□□□□□ -2.62
Scn4aQ9ER60 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.34□□□□□ -2.62
Scn4aQ9ER60 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.34□□□□□ -2.62
Scn4aQ9ER60 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.34□□□□□ -2.62
Scn4aQ9ER60 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.36□□□□□ -2.63
Scn4aQ9ER60 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.36□□□□□ -2.63
Scn4aQ9ER60 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.36□□□□□ -2.63
Scn4aQ9ER60 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.36□□□□□ -2.63
Scn4aQ9ER60 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.36□□□□□ -2.63
Scn4aQ9ER60 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.37□□□□□ -2.63
Scn4aQ9ER60 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.38□□□□□ -2.63
Scn4aQ9ER60 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.38□□□□□ -2.63
Scn4aQ9ER60 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.38□□□□□ -2.63
Scn4aQ9ER60 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.38□□□□□ -2.63
Scn4aQ9ER60 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.39□□□□□ -2.63
Scn4aQ9ER60 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 Snord57-201ENSMUST00000083338 72 ntBASIC-1.4□□□□□ -2.63
Scn4aQ9ER60 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.41□□□□□ -2.64
Scn4aQ9ER60 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.41□□□□□ -2.64
Scn4aQ9ER60 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.42□□□□□ -2.64
Scn4aQ9ER60 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.42□□□□□ -2.64
Scn4aQ9ER60 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.42□□□□□ -2.64
Scn4aQ9ER60 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.42□□□□□ -2.64
Scn4aQ9ER60 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.43□□□□□ -2.64
Scn4aQ9ER60 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.43□□□□□ -2.64
Scn4aQ9ER60 Gm27263-201ENSMUST00000184760 76 ntBASIC-1.45□□□□□ -2.64
Scn4aQ9ER60 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.45□□□□□ -2.64
Scn4aQ9ER60 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.45□□□□□ -2.64
Scn4aQ9ER60 Snord123-201ENSMUST00000158692 71 ntBASIC-1.45□□□□□ -2.64
Scn4aQ9ER60 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.45□□□□□ -2.64
Scn4aQ9ER60 Gm25920-201ENSMUST00000158307 99 ntBASIC-1.46□□□□□ -2.64
Scn4aQ9ER60 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.46□□□□□ -2.64
Scn4aQ9ER60 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.46□□□□□ -2.64
Scn4aQ9ER60 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.47□□□□□ -2.64
Scn4aQ9ER60 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.47□□□□□ -2.64
Scn4aQ9ER60 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.47□□□□□ -2.65
Scn4aQ9ER60 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.47□□□□□ -2.65
Scn4aQ9ER60 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.48□□□□□ -2.65
Scn4aQ9ER60 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.48□□□□□ -2.65
Scn4aQ9ER60 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.48□□□□□ -2.65
Scn4aQ9ER60 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.48□□□□□ -2.65
Scn4aQ9ER60 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.49□□□□□ -2.65
Scn4aQ9ER60 Gm22165-201ENSMUST00000158414 103 ntBASIC-1.49□□□□□ -2.65
Scn4aQ9ER60 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.49□□□□□ -2.65
Scn4aQ9ER60 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.49□□□□□ -2.65
Scn4aQ9ER60 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.5□□□□□ -2.65
Scn4aQ9ER60 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 148.7 ms