Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mir876-201ENSMUST00000104659 81 ntBASIC0.27□□□□□ -2.37
Upf1Q9EPU0 Gm27735-201ENSMUST00000185085 76 ntBASIC0.27□□□□□ -2.37
Upf1Q9EPU0 Gm23761-201ENSMUST00000158347 104 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm25522-201ENSMUST00000158394 105 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm37750-201ENSMUST00000193563 129 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm24091-201ENSMUST00000082550 83 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm25791-201ENSMUST00000083292 137 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Gm23711-201ENSMUST00000083856 83 ntBASIC0.26□□□□□ -2.37
Upf1Q9EPU0 Mir672-201ENSMUST00000102331 100 ntBASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Gm24946-201ENSMUST00000158332 106 ntBASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Gm27415-201ENSMUST00000183720 95 ntBASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Mir363-201ENSMUST00000093598 75 ntBASIC0.25□□□□□ -2.37
Upf1Q9EPU0 Gm24372-201ENSMUST00000104400 110 ntBASIC0.24□□□□□ -2.37
Upf1Q9EPU0 Gm23376-201ENSMUST00000082938 160 ntBASIC0.24□□□□□ -2.37
Upf1Q9EPU0 Mir23a-201ENSMUST00000083677 75 ntBASIC0.24□□□□□ -2.37
Upf1Q9EPU0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Upf1Q9EPU0 Mir574-201ENSMUST00000103854 78 ntBASIC0.22□□□□□ -2.37
Upf1Q9EPU0 Gm25440-201ENSMUST00000158279 154 ntBASIC0.22□□□□□ -2.37
Upf1Q9EPU0 Gm22087-201ENSMUST00000158339 88 ntBASIC0.22□□□□□ -2.37
Upf1Q9EPU0 Gm22838-201ENSMUST00000158437 99 ntBASIC0.22□□□□□ -2.37
Upf1Q9EPU0 Gm22071-201ENSMUST00000116857 83 ntBASIC0.21□□□□□ -2.38
Upf1Q9EPU0 Gm23690-201ENSMUST00000083036 94 ntBASIC0.21□□□□□ -2.38
Upf1Q9EPU0 Gm23477-201ENSMUST00000158882 128 ntBASIC0.2□□□□□ -2.38
Upf1Q9EPU0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Upf1Q9EPU0 Gm25802-201ENSMUST00000082639 77 ntBASIC0.2□□□□□ -2.38
Upf1Q9EPU0 Mir382-201ENSMUST00000083494 76 ntBASIC0.19□□□□□ -2.38
Upf1Q9EPU0 Gm23335-201ENSMUST00000117021 90 ntBASIC0.18□□□□□ -2.38
Upf1Q9EPU0 Gm24296-201ENSMUST00000158297 106 ntBASIC0.18□□□□□ -2.38
Upf1Q9EPU0 Gm24918-201ENSMUST00000083022 130 ntBASIC0.18□□□□□ -2.38
Upf1Q9EPU0 Gm25309-201ENSMUST00000116728 126 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Gm25847-201ENSMUST00000116793 96 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Mir7651-201ENSMUST00000184154 64 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Gm6607-201ENSMUST00000215035 328 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Gm23293-201ENSMUST00000082552 104 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Gm23056-201ENSMUST00000082803 111 ntBASIC0.17□□□□□ -2.38
Upf1Q9EPU0 Gm22942-201ENSMUST00000158563 124 ntBASIC0.16□□□□□ -2.38
Upf1Q9EPU0 Gm24587-201ENSMUST00000116697 89 ntBASIC0.15□□□□□ -2.39
Upf1Q9EPU0 Gm23494-201ENSMUST00000116830 126 ntBASIC0.15□□□□□ -2.39
Upf1Q9EPU0 Mir34c-201ENSMUST00000083653 77 ntBASIC0.15□□□□□ -2.39
Upf1Q9EPU0 Mir487b-201ENSMUST00000102265 82 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Mir3064-201ENSMUST00000175532 67 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Gm45125-201ENSMUST00000206908 151 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Snora62-201ENSMUST00000082991 149 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Gm24256-201ENSMUST00000083696 84 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Gm25186-201ENSMUST00000083909 108 ntBASIC0.14□□□□□ -2.39
Upf1Q9EPU0 Gm22368-201ENSMUST00000102416 109 ntBASIC0.12□□□□□ -2.39
Upf1Q9EPU0 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.11□□□□□ -2.39
Upf1Q9EPU0 Gm23159-201ENSMUST00000175088 77 ntBASIC0.11□□□□□ -2.39
Upf1Q9EPU0 Gm38208-201ENSMUST00000192476 114 ntBASIC0.11□□□□□ -2.39
Upf1Q9EPU0 Snord85-201ENSMUST00000083262 73 ntBASIC0.11□□□□□ -2.39
Upf1Q9EPU0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Upf1Q9EPU0 Gm25045-201ENSMUST00000122670 99 ntBASIC0.1□□□□□ -2.39
Upf1Q9EPU0 Gm22095-201ENSMUST00000158984 150 ntBASIC0.1□□□□□ -2.39
Upf1Q9EPU0 Mir15b-201ENSMUST00000083646 64 ntBASIC0.1□□□□□ -2.39
Upf1Q9EPU0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Upf1Q9EPU0 Gm27263-201ENSMUST00000184760 76 ntBASIC0.09□□□□□ -2.4
Upf1Q9EPU0 Snora16a-202ENSMUST00000196061 137 ntBASIC0.09□□□□□ -2.4
Upf1Q9EPU0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Upf1Q9EPU0 Mir717-201ENSMUST00000102259 109 ntBASIC0.08□□□□□ -2.4
Upf1Q9EPU0 Gm22607-201ENSMUST00000158291 105 ntBASIC0.08□□□□□ -2.4
Upf1Q9EPU0 Gm23017-201ENSMUST00000177583 72 ntBASIC0.08□□□□□ -2.4
Upf1Q9EPU0 Mir3967-201ENSMUST00000198710 68 ntBASIC0.08□□□□□ -2.4
Upf1Q9EPU0 Gm23590-201ENSMUST00000157661 104 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm22165-201ENSMUST00000158414 103 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm22234-201ENSMUST00000174906 65 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm25032-201ENSMUST00000175411 84 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm23726-201ENSMUST00000178937 67 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm27610-201ENSMUST00000184026 74 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Gm20305-201ENSMUST00000193226 177 ntBASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.07□□□□□ -2.4
Upf1Q9EPU0 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Gm24378-201ENSMUST00000122699 106 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Snord45b-201ENSMUST00000082797 71 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Gm23442-201ENSMUST00000082919 134 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Gm24201-201ENSMUST00000082946 125 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Mir214-201ENSMUST00000083582 110 ntBASIC0.06□□□□□ -2.4
Upf1Q9EPU0 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Upf1Q9EPU0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Upf1Q9EPU0 Gm24400-201ENSMUST00000157865 107 ntBASIC0.03□□□□□ -2.4
Upf1Q9EPU0 Gm24843-201ENSMUST00000158682 76 ntBASIC0.03□□□□□ -2.4
Upf1Q9EPU0 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.03□□□□□ -2.4
Upf1Q9EPU0 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Upf1Q9EPU0 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.02□□□□□ -2.41
Upf1Q9EPU0 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.01□□□□□ -2.41
Upf1Q9EPU0 Gm45374-201ENSMUST00000211388 136 ntBASIC0.01□□□□□ -2.41
Upf1Q9EPU0 Gm24218-201ENSMUST00000180163 105 ntBASIC0□□□□□ -2.41
Upf1Q9EPU0 Gm27749-201ENSMUST00000183651 125 ntBASIC0□□□□□ -2.41
Upf1Q9EPU0 Gm44375-201ENSMUST00000196657 150 ntBASIC0□□□□□ -2.41
Upf1Q9EPU0 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.01□□□□□ -2.41
Upf1Q9EPU0 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.01□□□□□ -2.41
Upf1Q9EPU0 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.02□□□□□ -2.41
Upf1Q9EPU0 Gm26485-201ENSMUST00000158019 64 ntBASIC-0.03□□□□□ -2.41
Upf1Q9EPU0 Gm22069-201ENSMUST00000179911 107 ntBASIC-0.03□□□□□ -2.41
Upf1Q9EPU0 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.04□□□□□ -2.42
Upf1Q9EPU0 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.04□□□□□ -2.42
Upf1Q9EPU0 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms