Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mir7077-201ENSMUST00000183991 57 ntBASIC0.41□□□□□ -2.34
Rnf135Q9CWS1 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.41□□□□□ -2.34
Rnf135Q9CWS1 Mir717-201ENSMUST00000102259 109 ntBASIC0.4□□□□□ -2.35
Rnf135Q9CWS1 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.4□□□□□ -2.35
Rnf135Q9CWS1 Mir224-201ENSMUST00000083608 82 ntBASIC0.4□□□□□ -2.35
Rnf135Q9CWS1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Rnf135Q9CWS1 Gm27475-201ENSMUST00000183420 61 ntBASIC0.39□□□□□ -2.35
Rnf135Q9CWS1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Rnf135Q9CWS1 Mir669f-201ENSMUST00000103850 121 ntBASIC0.38□□□□□ -2.35
Rnf135Q9CWS1 Gm22088-201ENSMUST00000158341 117 ntBASIC0.38□□□□□ -2.35
Rnf135Q9CWS1 Mir6896-201ENSMUST00000198033 73 ntBASIC0.38□□□□□ -2.35
Rnf135Q9CWS1 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.38□□□□□ -2.35
Rnf135Q9CWS1 Gm23531-201ENSMUST00000104567 68 ntBASIC0.37□□□□□ -2.35
Rnf135Q9CWS1 Gm23494-201ENSMUST00000116830 126 ntBASIC0.37□□□□□ -2.35
Rnf135Q9CWS1 Gm23994-201ENSMUST00000158059 88 ntBASIC0.37□□□□□ -2.35
Rnf135Q9CWS1 Gm27263-201ENSMUST00000184760 76 ntBASIC0.37□□□□□ -2.35
Rnf135Q9CWS1 Gm22048-201ENSMUST00000104721 89 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm24400-201ENSMUST00000157865 107 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Scarna8-201ENSMUST00000158333 131 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm23017-201ENSMUST00000177583 72 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm28001-201ENSMUST00000183561 117 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm37750-201ENSMUST00000193563 129 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Snora62-201ENSMUST00000082991 149 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm25791-201ENSMUST00000083292 137 ntBASIC0.36□□□□□ -2.35
Rnf135Q9CWS1 Gm25497-201ENSMUST00000104425 132 ntBASIC0.35□□□□□ -2.35
Rnf135Q9CWS1 Gm26257-201ENSMUST00000122500 107 ntBASIC0.35□□□□□ -2.35
Rnf135Q9CWS1 Gm25552-201ENSMUST00000158081 91 ntBASIC0.35□□□□□ -2.35
Rnf135Q9CWS1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.35□□□□□ -2.35
Rnf135Q9CWS1 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.35□□□□□ -2.35
Rnf135Q9CWS1 Gm22595-201ENSMUST00000104250 130 ntBASIC0.34□□□□□ -2.36
Rnf135Q9CWS1 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Rnf135Q9CWS1 Gm23649-201ENSMUST00000179007 107 ntBASIC0.34□□□□□ -2.36
Rnf135Q9CWS1 Gm25186-201ENSMUST00000083909 108 ntBASIC0.34□□□□□ -2.36
Rnf135Q9CWS1 Gm24467-201ENSMUST00000157887 126 ntBASIC0.33□□□□□ -2.36
Rnf135Q9CWS1 Gm23278-201ENSMUST00000157911 143 ntBASIC0.33□□□□□ -2.36
Rnf135Q9CWS1 Gm45617-201ENSMUST00000211132 209 ntBASIC0.33□□□□□ -2.36
Rnf135Q9CWS1 Mir710-201ENSMUST00000102088 110 ntBASIC0.32□□□□□ -2.36
Rnf135Q9CWS1 Gm23590-201ENSMUST00000157661 104 ntBASIC0.32□□□□□ -2.36
Rnf135Q9CWS1 Gm23821-201ENSMUST00000158738 106 ntBASIC0.32□□□□□ -2.36
Rnf135Q9CWS1 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.32□□□□□ -2.36
Rnf135Q9CWS1 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Rnf135Q9CWS1 Gm23072-201ENSMUST00000158243 123 ntBASIC0.31□□□□□ -2.36
Rnf135Q9CWS1 Gm25522-201ENSMUST00000158394 105 ntBASIC0.3□□□□□ -2.36
Rnf135Q9CWS1 Gm25950-201ENSMUST00000175331 100 ntBASIC0.3□□□□□ -2.36
Rnf135Q9CWS1 Gm26491-201ENSMUST00000179268 121 ntBASIC0.3□□□□□ -2.36
Rnf135Q9CWS1 Gm25183-201ENSMUST00000157752 106 ntBASIC0.29□□□□□ -2.36
Rnf135Q9CWS1 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.28□□□□□ -2.36
Rnf135Q9CWS1 Gm22717-201ENSMUST00000122703 171 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Gm24226-201ENSMUST00000158826 97 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Gm25648-201ENSMUST00000177844 79 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Mir8107-201ENSMUST00000184024 117 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Mir3967-201ENSMUST00000198710 68 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Gm22298-201ENSMUST00000082662 133 ntBASIC0.27□□□□□ -2.37
Rnf135Q9CWS1 Gm24833-201ENSMUST00000116775 120 ntBASIC0.26□□□□□ -2.37
Rnf135Q9CWS1 Gm22838-201ENSMUST00000158437 99 ntBASIC0.26□□□□□ -2.37
Rnf135Q9CWS1 Gm24927-201ENSMUST00000083397 107 ntBASIC0.25□□□□□ -2.37
Rnf135Q9CWS1 Gm44328-201ENSMUST00000199331 75 ntBASIC0.24□□□□□ -2.37
Rnf135Q9CWS1 Gm24612-201ENSMUST00000083267 107 ntBASIC0.24□□□□□ -2.37
Rnf135Q9CWS1 Gm25885-201ENSMUST00000157779 109 ntBASIC0.23□□□□□ -2.37
Rnf135Q9CWS1 Gm23159-201ENSMUST00000175088 77 ntBASIC0.23□□□□□ -2.37
Rnf135Q9CWS1 Gm27450-201ENSMUST00000104632 90 ntBASIC0.22□□□□□ -2.37
Rnf135Q9CWS1 Mir7231-201ENSMUST00000196252 61 ntBASIC0.22□□□□□ -2.37
Rnf135Q9CWS1 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.22□□□□□ -2.37
Rnf135Q9CWS1 Gm29344-201ENSMUST00000068143 210 ntBASIC0.21□□□□□ -2.38
Rnf135Q9CWS1 Gm25652-201ENSMUST00000083780 103 ntBASIC0.21□□□□□ -2.38
Rnf135Q9CWS1 Mir487b-201ENSMUST00000102265 82 ntBASIC0.2□□□□□ -2.38
Rnf135Q9CWS1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.2□□□□□ -2.38
Rnf135Q9CWS1 Gm23442-201ENSMUST00000082919 134 ntBASIC0.2□□□□□ -2.38
Rnf135Q9CWS1 Gm38208-201ENSMUST00000192476 114 ntBASIC0.19□□□□□ -2.38
Rnf135Q9CWS1 Gm25952-201ENSMUST00000175329 74 ntBASIC0.18□□□□□ -2.38
Rnf135Q9CWS1 Mir7651-201ENSMUST00000184154 64 ntBASIC0.18□□□□□ -2.38
Rnf135Q9CWS1 Snord57-201ENSMUST00000083338 72 ntBASIC0.18□□□□□ -2.38
Rnf135Q9CWS1 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.17□□□□□ -2.38
Rnf135Q9CWS1 Gm23730-201ENSMUST00000083236 107 ntBASIC0.17□□□□□ -2.38
Rnf135Q9CWS1 Gm24396-201ENSMUST00000116905 93 ntBASIC0.16□□□□□ -2.38
Rnf135Q9CWS1 Gm24843-201ENSMUST00000158682 76 ntBASIC0.16□□□□□ -2.38
Rnf135Q9CWS1 Mir3089-201ENSMUST00000175350 84 ntBASIC0.15□□□□□ -2.39
Rnf135Q9CWS1 Gm26139-201ENSMUST00000180098 107 ntBASIC0.15□□□□□ -2.39
Rnf135Q9CWS1 Gm25087-201ENSMUST00000101992 78 ntBASIC0.14□□□□□ -2.39
Rnf135Q9CWS1 Gm24725-201ENSMUST00000158229 125 ntBASIC0.14□□□□□ -2.39
Rnf135Q9CWS1 Gm27749-201ENSMUST00000183651 125 ntBASIC0.14□□□□□ -2.39
Rnf135Q9CWS1 Gm25802-201ENSMUST00000082639 77 ntBASIC0.14□□□□□ -2.39
Rnf135Q9CWS1 Gm26467-201ENSMUST00000097257 78 ntBASIC0.14□□□□□ -2.39
Rnf135Q9CWS1 Gm23955-201ENSMUST00000157214 100 ntBASIC0.13□□□□□ -2.39
Rnf135Q9CWS1 Gm22039-201ENSMUST00000157278 132 ntBASIC0.13□□□□□ -2.39
Rnf135Q9CWS1 Mir141-201ENSMUST00000083540 72 ntBASIC0.13□□□□□ -2.39
Rnf135Q9CWS1 Gm24793-201ENSMUST00000104289 132 ntBASIC0.12□□□□□ -2.39
Rnf135Q9CWS1 Snord85-201ENSMUST00000083262 73 ntBASIC0.12□□□□□ -2.39
Rnf135Q9CWS1 Mir327-201ENSMUST00000199328 69 ntBASIC0.11□□□□□ -2.39
Rnf135Q9CWS1 Gm23749-201ENSMUST00000104223 131 ntBASIC0.1□□□□□ -2.39
Rnf135Q9CWS1 Gm22016-201ENSMUST00000158793 114 ntBASIC0.1□□□□□ -2.39
Rnf135Q9CWS1 Gm22368-201ENSMUST00000102416 109 ntBASIC0.09□□□□□ -2.4
Rnf135Q9CWS1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Rnf135Q9CWS1 Gm24903-201ENSMUST00000158131 126 ntBASIC0.08□□□□□ -2.4
Rnf135Q9CWS1 Gm22327-201ENSMUST00000158899 108 ntBASIC0.08□□□□□ -2.4
Rnf135Q9CWS1 Mir142b-201ENSMUST00000083486 115 ntBASIC0.08□□□□□ -2.4
Rnf135Q9CWS1 Gm44375-201ENSMUST00000196657 150 ntBASIC0.06□□□□□ -2.4
Rnf135Q9CWS1 Gm22078-201ENSMUST00000157593 103 ntBASIC0.05□□□□□ -2.4
Rnf135Q9CWS1 Gm37832-201ENSMUST00000118935 189 ntBASIC0.04□□□□□ -2.4
Rnf135Q9CWS1 Gm24996-201ENSMUST00000158390 99 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 172.2 ms