Protein–RNA interactions for Protein: Q8VEE4
Rpa1, Replication protein A 70 kDa DNA-binding subunit, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Rpa1 | Q8VEE4 | Mir200b-201 | ENSMUST00000083615 | 70 nt | BASIC | 0,42 | □□□□□ -2,34 | | |
Rpa1 | Q8VEE4 | Mir6985-201 | ENSMUST00000184641 | 61 nt | BASIC | 0,41 | □□□□□ -2,34 | | |
Rpa1 | Q8VEE4 | Gm29344-201 | ENSMUST00000068143 | 210 nt | BASIC | 0,41 | □□□□□ -2,34 | | |
Rpa1 | Q8VEE4 | Gm22759-201 | ENSMUST00000102276 | 96 nt | BASIC | 0,39 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm25183-201 | ENSMUST00000157752 | 106 nt | BASIC | 0,38 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm22838-201 | ENSMUST00000158437 | 99 nt | BASIC | 0,38 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm23672-201 | ENSMUST00000157471 | 107 nt | BASIC | 0,37 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm23072-201 | ENSMUST00000158243 | 123 nt | BASIC | 0,37 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm26285-201 | ENSMUST00000177923 | 107 nt | BASIC | 0,37 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm23622-201 | ENSMUST00000082460 | 107 nt | BASIC | 0,37 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Mir6905-201 | ENSMUST00000184228 | 70 nt | BASIC | 0,36 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm25791-201 | ENSMUST00000083292 | 137 nt | BASIC | 0,36 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm24927-201 | ENSMUST00000083397 | 107 nt | BASIC | 0,36 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Mir344-201 | ENSMUST00000083634 | 95 nt | BASIC | 0,36 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm24833-201 | ENSMUST00000116775 | 120 nt | BASIC | 0,35 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm13577-201 | ENSMUST00000121365 | 205 nt | BASIC | 0,35 | □□□□□ -2,35 | | |
Rpa1 | Q8VEE4 | Gm22149-201 | ENSMUST00000104442 | 136 nt | BASIC | 0,34 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm27450-201 | ENSMUST00000104632 | 90 nt | BASIC | 0,34 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm44828-201 | ENSMUST00000203745 | 106 nt | BASIC | 0,34 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm23821-201 | ENSMUST00000158738 | 106 nt | BASIC | 0,33 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm26116-201 | ENSMUST00000175600 | 77 nt | BASIC | 0,32 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm24342-201 | ENSMUST00000103907 | 104 nt | BASIC | 0,31 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm24396-201 | ENSMUST00000116905 | 93 nt | BASIC | 0,31 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm26152-201 | ENSMUST00000157427 | 101 nt | BASIC | 0,31 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Mir7651-201 | ENSMUST00000184154 | 64 nt | BASIC | 0,31 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm23321-201 | ENSMUST00000104465 | 126 nt | BASIC | 0,3 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm24226-201 | ENSMUST00000158826 | 97 nt | BASIC | 0,3 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm38208-201 | ENSMUST00000192476 | 114 nt | BASIC | 0,3 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm25952-201 | ENSMUST00000175329 | 74 nt | BASIC | 0,28 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Mir6365-201 | ENSMUST00000183990 | 101 nt | BASIC | 0,28 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Mir7231-201 | ENSMUST00000196252 | 61 nt | BASIC | 0,28 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm25802-201 | ENSMUST00000082639 | 77 nt | BASIC | 0,28 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Snord57-201 | ENSMUST00000083338 | 72 nt | BASIC | 0,28 | □□□□□ -2,36 | | |
Rpa1 | Q8VEE4 | Gm23159-201 | ENSMUST00000175088 | 77 nt | BASIC | 0,27 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm22298-201 | ENSMUST00000082662 | 133 nt | BASIC | 0,25 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm24612-201 | ENSMUST00000083267 | 107 nt | BASIC | 0,25 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Mir487b-201 | ENSMUST00000102265 | 82 nt | BASIC | 0,24 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm23126-201 | ENSMUST00000104260 | 134 nt | BASIC | 0,23 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm26139-201 | ENSMUST00000180098 | 107 nt | BASIC | 0,23 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm27749-201 | ENSMUST00000183651 | 125 nt | BASIC | 0,22 | □□□□□ -2,37 | | |
Rpa1 | Q8VEE4 | Gm23442-201 | ENSMUST00000082919 | 134 nt | BASIC | 0,21 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm23730-201 | ENSMUST00000083236 | 107 nt | BASIC | 0,21 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Mir710-201 | ENSMUST00000102088 | 110 nt | BASIC | 0,2 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Mir8116-201 | ENSMUST00000184134 | 97 nt | BASIC | 0,19 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm22039-201 | ENSMUST00000157278 | 132 nt | BASIC | 0,18 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm24843-201 | ENSMUST00000158682 | 76 nt | BASIC | 0,18 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Snord85-201 | ENSMUST00000083262 | 73 nt | BASIC | 0,18 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm24555-201 | ENSMUST00000104548 | 124 nt | BASIC | 0,17 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Mir344-2-201 | ENSMUST00000175446 | 80 nt | BASIC | 0,17 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Mir3967-201 | ENSMUST00000198710 | 68 nt | BASIC | 0,17 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | n-R5s18-201 | ENSMUST00000122740 | 121 nt | BASIC | 0,16 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm22078-201 | ENSMUST00000157593 | 103 nt | BASIC | 0,16 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm24996-201 | ENSMUST00000158390 | 99 nt | BASIC | 0,16 | □□□□□ -2,38 | | |
Rpa1 | Q8VEE4 | Gm22016-201 | ENSMUST00000158793 | 114 nt | BASIC | 0,15 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm22368-201 | ENSMUST00000102416 | 109 nt | BASIC | 0,14 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm24772-201 | ENSMUST00000158507 | 110 nt | BASIC | 0,14 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm25465-201 | ENSMUST00000157716 | 105 nt | BASIC | 0,13 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Mir7077-201 | ENSMUST00000183991 | 57 nt | BASIC | 0,13 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Mir219b-201 | ENSMUST00000198317 | 65 nt | BASIC | 0,13 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm23955-201 | ENSMUST00000157214 | 100 nt | BASIC | 0,12 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm22431-201 | ENSMUST00000158545 | 107 nt | BASIC | 0,12 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm44375-201 | ENSMUST00000196657 | 150 nt | BASIC | 0,12 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm22965-201 | ENSMUST00000157958 | 101 nt | BASIC | 0,11 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Mir7079-201 | ENSMUST00000184697 | 69 nt | BASIC | 0,1 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Mir142b-201 | ENSMUST00000083486 | 115 nt | BASIC | 0,1 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm25652-201 | ENSMUST00000083780 | 103 nt | BASIC | 0,1 | □□□□□ -2,39 | | |
Rpa1 | Q8VEE4 | Gm25087-201 | ENSMUST00000101992 | 78 nt | BASIC | 0,09 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Mir181b-1-201 | ENSMUST00000083524 | 80 nt | BASIC | 0,09 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm26467-201 | ENSMUST00000097257 | 78 nt | BASIC | 0,09 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm24725-201 | ENSMUST00000158229 | 125 nt | BASIC | 0,08 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Mir382-201 | ENSMUST00000083494 | 76 nt | BASIC | 0,08 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | AL845349.1-201 | ENSMUST00000213794 | 78 nt | BASIC | 0,07 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm23173-201 | ENSMUST00000157161 | 160 nt | BASIC | 0,06 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm22157-201 | ENSMUST00000158410 | 104 nt | BASIC | 0,06 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Mir196a-2-201 | ENSMUST00000083554 | 85 nt | BASIC | 0,05 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm24259-201 | ENSMUST00000083740 | 107 nt | BASIC | 0,05 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm24797-201 | ENSMUST00000178103 | 107 nt | BASIC | 0,03 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Mir327-201 | ENSMUST00000199328 | 69 nt | BASIC | 0,03 | □□□□□ -2,4 | | |
Rpa1 | Q8VEE4 | Gm11116-201 | ENSMUST00000113257 | 54 nt | APPRIS P1 TSL 5 BASIC | 0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm23783-201 | ENSMUST00000157941 | 102 nt | BASIC | 0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm24218-201 | ENSMUST00000180163 | 105 nt | BASIC | 0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm25703-201 | ENSMUST00000083123 | 151 nt | BASIC | 0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm22327-201 | ENSMUST00000158899 | 108 nt | BASIC | 0,01 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm26210-201 | ENSMUST00000158680 | 91 nt | BASIC | 0 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Mir3089-201 | ENSMUST00000175350 | 84 nt | BASIC | 0 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm22746-201 | ENSMUST00000082494 | 107 nt | BASIC | 0 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm22077-201 | ENSMUST00000157594 | 93 nt | BASIC | -0,01 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Mir6896-201 | ENSMUST00000198033 | 73 nt | BASIC | -0,01 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm25787-201 | ENSMUST00000104709 | 92 nt | BASIC | -0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm22335-201 | ENSMUST00000157724 | 99 nt | BASIC | -0,02 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm23531-201 | ENSMUST00000104567 | 68 nt | BASIC | -0,03 | □□□□□ -2,41 | | |
Rpa1 | Q8VEE4 | Gm25326-201 | ENSMUST00000101903 | 107 nt | BASIC | -0,04 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm23180-201 | ENSMUST00000158686 | 125 nt | BASIC | -0,04 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm37832-201 | ENSMUST00000118935 | 189 nt | BASIC | -0,05 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm25249-201 | ENSMUST00000175471 | 78 nt | BASIC | -0,05 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm25247-201 | ENSMUST00000175475 | 90 nt | BASIC | -0,05 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm6358-201 | ENSMUST00000089101 | 156 nt | APPRIS ALT2 BASIC | -0,05 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm22813-201 | ENSMUST00000199948 | 123 nt | BASIC | -0,06 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Mir672-201 | ENSMUST00000102331 | 100 nt | BASIC | -0,07 | □□□□□ -2,42 | | |
Rpa1 | Q8VEE4 | Gm22340-201 | ENSMUST00000157717 | 114 nt | BASIC | -0,07 | □□□□□ -2,42 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 130,3 ms