Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir672-201ENSMUST00000102331 100 ntBASIC-0.03□□□□□ -2.41
Brf1Q8CFK2 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.03□□□□□ -2.41
Brf1Q8CFK2 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.03□□□□□ -2.41
Brf1Q8CFK2 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.03□□□□□ -2.41
Brf1Q8CFK2 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.03□□□□□ -2.41
Brf1Q8CFK2 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.04□□□□□ -2.42
Brf1Q8CFK2 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.04□□□□□ -2.42
Brf1Q8CFK2 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.04□□□□□ -2.42
Brf1Q8CFK2 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.04□□□□□ -2.42
Brf1Q8CFK2 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.04□□□□□ -2.42
Brf1Q8CFK2 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.05□□□□□ -2.42
Brf1Q8CFK2 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.06□□□□□ -2.42
Brf1Q8CFK2 Mir876-201ENSMUST00000104659 81 ntBASIC-0.07□□□□□ -2.42
Brf1Q8CFK2 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.08□□□□□ -2.42
Brf1Q8CFK2 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.09□□□□□ -2.42
Brf1Q8CFK2 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.09□□□□□ -2.42
Brf1Q8CFK2 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Brf1Q8CFK2 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.09□□□□□ -2.42
Brf1Q8CFK2 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Brf1Q8CFK2 Mir717-201ENSMUST00000102259 109 ntBASIC-0.1□□□□□ -2.43
Brf1Q8CFK2 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.1□□□□□ -2.43
Brf1Q8CFK2 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.1□□□□□ -2.43
Brf1Q8CFK2 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
Brf1Q8CFK2 Mir191-201ENSMUST00000196210 74 ntBASIC-0.11□□□□□ -2.43
Brf1Q8CFK2 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.12□□□□□ -2.43
Brf1Q8CFK2 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.12□□□□□ -2.43
Brf1Q8CFK2 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.12□□□□□ -2.43
Brf1Q8CFK2 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.12□□□□□ -2.43
Brf1Q8CFK2 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.13□□□□□ -2.43
Brf1Q8CFK2 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.13□□□□□ -2.43
Brf1Q8CFK2 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.13□□□□□ -2.43
Brf1Q8CFK2 Mir327-201ENSMUST00000199328 69 ntBASIC-0.14□□□□□ -2.43
Brf1Q8CFK2 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.15□□□□□ -2.43
Brf1Q8CFK2 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.15□□□□□ -2.43
Brf1Q8CFK2 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.15□□□□□ -2.43
Brf1Q8CFK2 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.16□□□□□ -2.44
Brf1Q8CFK2 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.16□□□□□ -2.44
Brf1Q8CFK2 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.17□□□□□ -2.44
Brf1Q8CFK2 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.17□□□□□ -2.44
Brf1Q8CFK2 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Brf1Q8CFK2 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Brf1Q8CFK2 Mir214-201ENSMUST00000083582 110 ntBASIC-0.17□□□□□ -2.44
Brf1Q8CFK2 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.18□□□□□ -2.44
Brf1Q8CFK2 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.18□□□□□ -2.44
Brf1Q8CFK2 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.19□□□□□ -2.44
Brf1Q8CFK2 Mir466l-201ENSMUST00000104866 121 ntBASIC-0.2□□□□□ -2.44
Brf1Q8CFK2 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
Brf1Q8CFK2 Gm22033-201ENSMUST00000116947 90 ntBASIC-0.2□□□□□ -2.44
Brf1Q8CFK2 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.2□□□□□ -2.44
Brf1Q8CFK2 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.21□□□□□ -2.44
Brf1Q8CFK2 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.21□□□□□ -2.44
Brf1Q8CFK2 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.21□□□□□ -2.44
Brf1Q8CFK2 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.21□□□□□ -2.44
Brf1Q8CFK2 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.21□□□□□ -2.44
Brf1Q8CFK2 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.22□□□□□ -2.44
Brf1Q8CFK2 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.22□□□□□ -2.44
Brf1Q8CFK2 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.23□□□□□ -2.45
Brf1Q8CFK2 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
Brf1Q8CFK2 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.23□□□□□ -2.45
Brf1Q8CFK2 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.24□□□□□ -2.45
Brf1Q8CFK2 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Brf1Q8CFK2 Gm23293-201ENSMUST00000082552 104 ntBASIC-0.25□□□□□ -2.45
Brf1Q8CFK2 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.25□□□□□ -2.45
Brf1Q8CFK2 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.26□□□□□ -2.45
Brf1Q8CFK2 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.26□□□□□ -2.45
Brf1Q8CFK2 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.26□□□□□ -2.45
Brf1Q8CFK2 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.26□□□□□ -2.45
Brf1Q8CFK2 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.26□□□□□ -2.45
Brf1Q8CFK2 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.27□□□□□ -2.45
Brf1Q8CFK2 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.27□□□□□ -2.45
Brf1Q8CFK2 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.27□□□□□ -2.45
Brf1Q8CFK2 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.28□□□□□ -2.45
Brf1Q8CFK2 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.29□□□□□ -2.46
Brf1Q8CFK2 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.29□□□□□ -2.46
Brf1Q8CFK2 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.3□□□□□ -2.46
Brf1Q8CFK2 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.31□□□□□ -2.46
Brf1Q8CFK2 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.32□□□□□ -2.46
Brf1Q8CFK2 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.32□□□□□ -2.46
Brf1Q8CFK2 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.33□□□□□ -2.46
Brf1Q8CFK2 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.33□□□□□ -2.46
Brf1Q8CFK2 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.33□□□□□ -2.46
Brf1Q8CFK2 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.33□□□□□ -2.46
Brf1Q8CFK2 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.34□□□□□ -2.46
Brf1Q8CFK2 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.35□□□□□ -2.47
Brf1Q8CFK2 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Brf1Q8CFK2 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.36□□□□□ -2.47
Brf1Q8CFK2 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.36□□□□□ -2.47
Brf1Q8CFK2 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.36□□□□□ -2.47
Brf1Q8CFK2 Mir34c-201ENSMUST00000083653 77 ntBASIC-0.36□□□□□ -2.47
Brf1Q8CFK2 Mir494-201ENSMUST00000093632 85 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms