Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm25646-201ENSMUST00000178527 79 ntBASIC-2.6□□□□□ -2.83
Ccdc40Q8BI79 Gm22828-201ENSMUST00000083768 107 ntBASIC-2.6□□□□□ -2.83
Ccdc40Q8BI79 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.61□□□□□ -2.83
Ccdc40Q8BI79 Gm25753-201ENSMUST00000116792 121 ntBASIC-2.61□□□□□ -2.83
Ccdc40Q8BI79 Mir494-201ENSMUST00000093632 85 ntBASIC-2.62□□□□□ -2.83
Ccdc40Q8BI79 Gm25609-201ENSMUST00000104019 104 ntBASIC-2.63□□□□□ -2.83
Ccdc40Q8BI79 Gm27554-201ENSMUST00000185074 98 ntBASIC-2.63□□□□□ -2.83
Ccdc40Q8BI79 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.63□□□□□ -2.83
Ccdc40Q8BI79 Mir122-201ENSMUST00000083468 66 ntBASIC-2.63□□□□□ -2.83
Ccdc40Q8BI79 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.64□□□□□ -2.83
Ccdc40Q8BI79 Gm25158-201ENSMUST00000177681 121 ntBASIC-2.64□□□□□ -2.83
Ccdc40Q8BI79 Gm25449-201ENSMUST00000179389 79 ntBASIC-2.64□□□□□ -2.83
Ccdc40Q8BI79 Gm26229-201ENSMUST00000179699 121 ntBASIC-2.64□□□□□ -2.83
Ccdc40Q8BI79 Gm24400-201ENSMUST00000157865 107 ntBASIC-2.65□□□□□ -2.83
Ccdc40Q8BI79 Gm25071-201ENSMUST00000175232 70 ntBASIC-2.65□□□□□ -2.83
Ccdc40Q8BI79 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.67□□□□□ -2.84
Ccdc40Q8BI79 Gm24927-201ENSMUST00000083397 107 ntBASIC-2.68□□□□□ -2.84
Ccdc40Q8BI79 Gm24926-201ENSMUST00000178053 79 ntBASIC-2.69□□□□□ -2.84
Ccdc40Q8BI79 Gm22632-201ENSMUST00000178266 79 ntBASIC-2.69□□□□□ -2.84
Ccdc40Q8BI79 Gm22677-201ENSMUST00000116977 108 ntBASIC-2.7□□□□□ -2.84
Ccdc40Q8BI79 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.7□□□□□ -2.84
Ccdc40Q8BI79 Gm25964-201ENSMUST00000157171 97 ntBASIC-2.71□□□□□ -2.84
Ccdc40Q8BI79 Gm10813-201ENSMUST00000099936 90 ntBASIC-2.72□□□□□ -2.84
Ccdc40Q8BI79 Gm25943-201ENSMUST00000103791 90 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Gm24916-201ENSMUST00000157287 79 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Gm25285-201ENSMUST00000178951 90 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Gm23306-201ENSMUST00000179058 105 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-2.73□□□□□ -2.85
Ccdc40Q8BI79 mt-Tv-201ENSMUST00000082389 69 ntBASIC-2.74□□□□□ -2.85
Ccdc40Q8BI79 Gm25401-201ENSMUST00000082975 106 ntBASIC-2.74□□□□□ -2.85
Ccdc40Q8BI79 Gm26051-201ENSMUST00000104642 93 ntBASIC-2.75□□□□□ -2.85
Ccdc40Q8BI79 Gm22384-201ENSMUST00000158187 104 ntBASIC-2.76□□□□□ -2.85
Ccdc40Q8BI79 AC164561.1-201ENSMUST00000220414 115 ntBASIC-2.76□□□□□ -2.85
Ccdc40Q8BI79 Gm22297-201ENSMUST00000083312 106 ntBASIC-2.76□□□□□ -2.85
Ccdc40Q8BI79 Gm22770-201ENSMUST00000158368 67 ntBASIC-2.77□□□□□ -2.85
Ccdc40Q8BI79 Gm22413-201ENSMUST00000175465 85 ntBASIC-2.77□□□□□ -2.85
Ccdc40Q8BI79 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-2.78□□□□□ -2.85
Ccdc40Q8BI79 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-2.78□□□□□ -2.85
Ccdc40Q8BI79 Gm23590-201ENSMUST00000157661 104 ntBASIC-2.79□□□□□ -2.86
Ccdc40Q8BI79 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.79□□□□□ -2.86
Ccdc40Q8BI79 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.79□□□□□ -2.86
Ccdc40Q8BI79 Gm25098-201ENSMUST00000177580 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm23356-201ENSMUST00000177610 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24027-201ENSMUST00000177611 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22511-201ENSMUST00000177628 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22630-201ENSMUST00000177781 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm23560-201ENSMUST00000177782 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25462-201ENSMUST00000177833 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm26059-201ENSMUST00000177865 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22255-201ENSMUST00000177933 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25146-201ENSMUST00000177976 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25523-201ENSMUST00000178044 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24585-201ENSMUST00000178104 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22627-201ENSMUST00000178127 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22912-201ENSMUST00000178242 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24866-201ENSMUST00000178338 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22524-201ENSMUST00000178357 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25710-201ENSMUST00000178367 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm23575-201ENSMUST00000178406 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24872-201ENSMUST00000178434 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22449-201ENSMUST00000178924 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24702-201ENSMUST00000178965 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24206-201ENSMUST00000179011 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24528-201ENSMUST00000179164 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm22909-201ENSMUST00000179190 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm26334-201ENSMUST00000179403 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25463-201ENSMUST00000179405 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25742-201ENSMUST00000179530 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25209-201ENSMUST00000179576 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm26392-201ENSMUST00000179661 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25230-201ENSMUST00000179740 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm26434-201ENSMUST00000179778 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25741-201ENSMUST00000179825 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24759-201ENSMUST00000179827 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm24219-201ENSMUST00000179861 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm23254-201ENSMUST00000097244 79 ntBASIC-2.81□□□□□ -2.86
Ccdc40Q8BI79 Gm25862-201ENSMUST00000158250 129 ntBASIC-2.82□□□□□ -2.86
Ccdc40Q8BI79 Gm22605-201ENSMUST00000158289 108 ntBASIC-2.82□□□□□ -2.86
Ccdc40Q8BI79 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-2.82□□□□□ -2.86
Ccdc40Q8BI79 Gm25322-201ENSMUST00000122556 104 ntBASIC-2.83□□□□□ -2.86
Ccdc40Q8BI79 Gm26412-201ENSMUST00000157666 55 ntBASIC-2.83□□□□□ -2.86
Ccdc40Q8BI79 Gm24988-201ENSMUST00000104460 121 ntBASIC-2.85□□□□□ -2.87
Ccdc40Q8BI79 Gm22490-201ENSMUST00000157188 119 ntBASIC-2.85□□□□□ -2.87
Ccdc40Q8BI79 Gm22070-201ENSMUST00000178475 107 ntBASIC-2.85□□□□□ -2.87
Ccdc40Q8BI79 Snora2b-201ENSMUST00000084005 137 ntBASIC-2.85□□□□□ -2.87
Ccdc40Q8BI79 Gm24099-201ENSMUST00000083384 107 ntBASIC-2.86□□□□□ -2.87
Ccdc40Q8BI79 Mir466-201ENSMUST00000093591 73 ntBASIC-2.86□□□□□ -2.87
Ccdc40Q8BI79 Gm24637-201ENSMUST00000158674 85 ntBASIC-2.87□□□□□ -2.87
Ccdc40Q8BI79 Gm27975-201ENSMUST00000184400 101 ntBASIC-2.88□□□□□ -2.87
Ccdc40Q8BI79 Gm25798-201ENSMUST00000082641 107 ntBASIC-2.88□□□□□ -2.87
Ccdc40Q8BI79 Gm22197-201ENSMUST00000116866 58 ntBASIC-2.89□□□□□ -2.87
Ccdc40Q8BI79 Gm24162-201ENSMUST00000093665 102 ntBASIC-2.89□□□□□ -2.87
Ccdc40Q8BI79 Gm26425-201ENSMUST00000122529 82 ntBASIC-2.91□□□□□ -2.88
Ccdc40Q8BI79 Gm24001-201ENSMUST00000158463 85 ntBASIC-2.91□□□□□ -2.88
Ccdc40Q8BI79 Mir876-201ENSMUST00000104659 81 ntBASIC-2.92□□□□□ -2.88
Ccdc40Q8BI79 Mir367-201ENSMUST00000083479 75 ntBASIC-2.92□□□□□ -2.88
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms