Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
CtcfQ61164 mt-Tw-201ENSMUST00000082397 67 ntBASIC0.36□□□□□ -2.35
CtcfQ61164 Mir18-201ENSMUST00000083469 96 ntBASIC0.36□□□□□ -2.35
CtcfQ61164 Mir363-201ENSMUST00000093598 75 ntBASIC0.36□□□□□ -2.35
CtcfQ61164 Snord67-201ENSMUST00000104033 111 ntBASIC0.35□□□□□ -2.35
CtcfQ61164 Gm26485-201ENSMUST00000158019 64 ntBASIC0.35□□□□□ -2.35
CtcfQ61164 Gm22455-201ENSMUST00000082580 71 ntBASIC0.35□□□□□ -2.35
CtcfQ61164 Gm23785-201ENSMUST00000116741 96 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Gm25847-201ENSMUST00000116793 96 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Gm24378-201ENSMUST00000122699 106 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Gm22540-201ENSMUST00000158168 117 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Mir191-201ENSMUST00000196210 74 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Mir3065-201ENSMUST00000198674 87 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Gm44828-201ENSMUST00000203745 106 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Gm24201-201ENSMUST00000082946 125 ntBASIC0.34□□□□□ -2.36
CtcfQ61164 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.33□□□□□ -2.36
CtcfQ61164 Snord49b-201ENSMUST00000082503 72 ntBASIC0.33□□□□□ -2.36
CtcfQ61164 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm25275-201ENSMUST00000104297 129 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm24070-201ENSMUST00000104519 130 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm25309-201ENSMUST00000116728 126 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm23335-201ENSMUST00000117021 90 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm11966-201ENSMUST00000119907 87 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm24903-201ENSMUST00000158131 126 ntBASIC0.32□□□□□ -2.36
CtcfQ61164 Gm24796-201ENSMUST00000104007 107 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Gm24372-201ENSMUST00000104400 110 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Gm23761-201ENSMUST00000158347 104 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Gm27735-201ENSMUST00000185085 76 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Mir7065-201ENSMUST00000185110 61 ntBASIC0.31□□□□□ -2.36
CtcfQ61164 Gm23237-201ENSMUST00000104639 92 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Gm25440-201ENSMUST00000158279 154 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Gm22165-201ENSMUST00000158414 103 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Gm27475-201ENSMUST00000183420 61 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Snord45b-201ENSMUST00000082797 71 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Gm24918-201ENSMUST00000083022 130 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Mir15b-201ENSMUST00000083646 64 ntBASIC0.3□□□□□ -2.36
CtcfQ61164 Gm24331-201ENSMUST00000175099 67 ntBASIC0.29□□□□□ -2.36
CtcfQ61164 Gm23801-201ENSMUST00000175561 67 ntBASIC0.29□□□□□ -2.36
CtcfQ61164 Gm24485-201ENSMUST00000178283 67 ntBASIC0.29□□□□□ -2.36
CtcfQ61164 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.29□□□□□ -2.36
CtcfQ61164 Mir23a-201ENSMUST00000083677 75 ntBASIC0.29□□□□□ -2.36
CtcfQ61164 Mir672-201ENSMUST00000102331 100 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Mir574-201ENSMUST00000103854 78 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Mir876-201ENSMUST00000104659 81 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Gm23856-201ENSMUST00000158380 99 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Gm28001-201ENSMUST00000183561 117 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Gm25791-201ENSMUST00000083292 137 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Mir494-201ENSMUST00000093632 85 ntBASIC0.28□□□□□ -2.36
CtcfQ61164 Scarna8-201ENSMUST00000158333 131 ntBASIC0.27□□□□□ -2.37
CtcfQ61164 Gm25010-201ENSMUST00000158403 65 ntBASIC0.27□□□□□ -2.37
CtcfQ61164 Gm23821-201ENSMUST00000158738 106 ntBASIC0.27□□□□□ -2.37
CtcfQ61164 Mir6915-201ENSMUST00000198839 69 ntBASIC0.27□□□□□ -2.37
CtcfQ61164 Gm45125-201ENSMUST00000206908 151 ntBASIC0.27□□□□□ -2.37
CtcfQ61164 Mir717-201ENSMUST00000102259 109 ntBASIC0.26□□□□□ -2.37
CtcfQ61164 Gm23690-201ENSMUST00000083036 94 ntBASIC0.26□□□□□ -2.37
CtcfQ61164 Gm23494-201ENSMUST00000116830 126 ntBASIC0.25□□□□□ -2.37
CtcfQ61164 Gm37750-201ENSMUST00000193563 129 ntBASIC0.25□□□□□ -2.37
CtcfQ61164 Gm23017-201ENSMUST00000177583 72 ntBASIC0.24□□□□□ -2.37
CtcfQ61164 Gm25596-201ENSMUST00000178368 107 ntBASIC0.24□□□□□ -2.37
CtcfQ61164 Gm27263-201ENSMUST00000184760 76 ntBASIC0.24□□□□□ -2.37
CtcfQ61164 Gm45617-201ENSMUST00000211132 209 ntBASIC0.24□□□□□ -2.37
CtcfQ61164 Gm24296-201ENSMUST00000158297 106 ntBASIC0.23□□□□□ -2.37
CtcfQ61164 Snora62-201ENSMUST00000082991 149 ntBASIC0.23□□□□□ -2.37
CtcfQ61164 Gm25186-201ENSMUST00000083909 108 ntBASIC0.23□□□□□ -2.37
CtcfQ61164 Gm25354-201ENSMUST00000179110 105 ntBASIC0.22□□□□□ -2.37
CtcfQ61164 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
CtcfQ61164 Mir3967-201ENSMUST00000198710 68 ntBASIC0.22□□□□□ -2.37
CtcfQ61164 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.22□□□□□ -2.37
CtcfQ61164 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.21□□□□□ -2.38
CtcfQ61164 Gm23826-201ENSMUST00000157394 119 ntBASIC0.21□□□□□ -2.38
CtcfQ61164 Gm24400-201ENSMUST00000157865 107 ntBASIC0.21□□□□□ -2.38
CtcfQ61164 Mir487b-201ENSMUST00000102265 82 ntBASIC0.2□□□□□ -2.38
CtcfQ61164 Gm22595-201ENSMUST00000104250 130 ntBASIC0.2□□□□□ -2.38
CtcfQ61164 Gm24833-201ENSMUST00000116775 120 ntBASIC0.2□□□□□ -2.38
CtcfQ61164 Mir8107-201ENSMUST00000184024 117 ntBASIC0.2□□□□□ -2.38
CtcfQ61164 Gm6607-201ENSMUST00000215035 328 ntBASIC0.2□□□□□ -2.38
CtcfQ61164 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
CtcfQ61164 Gm24587-201ENSMUST00000116697 89 ntBASIC0.19□□□□□ -2.38
CtcfQ61164 Gm25952-201ENSMUST00000175329 74 ntBASIC0.19□□□□□ -2.38
CtcfQ61164 Gm25802-201ENSMUST00000082639 77 ntBASIC0.19□□□□□ -2.38
CtcfQ61164 Mir382-201ENSMUST00000083494 76 ntBASIC0.19□□□□□ -2.38
CtcfQ61164 Gm24256-201ENSMUST00000083696 84 ntBASIC0.19□□□□□ -2.38
CtcfQ61164 Gm25522-201ENSMUST00000158394 105 ntBASIC0.18□□□□□ -2.38
CtcfQ61164 Gm22838-201ENSMUST00000158437 99 ntBASIC0.18□□□□□ -2.38
CtcfQ61164 Gm22942-201ENSMUST00000158563 124 ntBASIC0.18□□□□□ -2.38
CtcfQ61164 Gm26257-201ENSMUST00000122500 107 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Gm25552-201ENSMUST00000158081 91 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Gm23072-201ENSMUST00000158243 123 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Gm23649-201ENSMUST00000179007 107 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Snora16a-202ENSMUST00000196061 137 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Gm22298-201ENSMUST00000082662 133 ntBASIC0.17□□□□□ -2.38
CtcfQ61164 Gm23590-201ENSMUST00000157661 104 ntBASIC0.16□□□□□ -2.38
CtcfQ61164 Gm23159-201ENSMUST00000175088 77 ntBASIC0.16□□□□□ -2.38
CtcfQ61164 Gm25183-201ENSMUST00000157752 106 ntBASIC0.15□□□□□ -2.39
CtcfQ61164 Gm26491-201ENSMUST00000179268 121 ntBASIC0.15□□□□□ -2.39
CtcfQ61164 Gm44328-201ENSMUST00000199331 75 ntBASIC0.15□□□□□ -2.39
CtcfQ61164 AC157278.1-201ENSMUST00000221621 148 ntBASIC0.15□□□□□ -2.39
CtcfQ61164 Gm23442-201ENSMUST00000082919 134 ntBASIC0.15□□□□□ -2.39
CtcfQ61164 Gm24226-201ENSMUST00000158826 97 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms