Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm22357-201ENSMUST00000082882 83 ntBASIC2,11□□□□□ -2,07
Trim41Q5NCC3 Mir27b-201ENSMUST00000083541 73 ntBASIC2,1□□□□□ -2,07
Trim41Q5NCC3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC2,1□□□□□ -2,07
Trim41Q5NCC3 Gm27943-201ENSMUST00000184844 116 ntBASIC2,09□□□□□ -2,07
Trim41Q5NCC3 Gm44455-201ENSMUST00000200061 82 ntBASIC2,09□□□□□ -2,07
Trim41Q5NCC3 mt-Tw-201ENSMUST00000082397 67 ntBASIC2,09□□□□□ -2,07
Trim41Q5NCC3 Snora62-201ENSMUST00000082991 149 ntBASIC2,09□□□□□ -2,07
Trim41Q5NCC3 Gm27974-201ENSMUST00000183415 105 ntBASIC2,08□□□□□ -2,08
Trim41Q5NCC3 Gm24920-201ENSMUST00000083018 85 ntBASIC2,08□□□□□ -2,08
Trim41Q5NCC3 Mir181b-1-201ENSMUST00000083524 80 ntBASIC2,08□□□□□ -2,08
Trim41Q5NCC3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC2,07□□□□□ -2,08
Trim41Q5NCC3 Gm25885-201ENSMUST00000157779 109 ntBASIC2,07□□□□□ -2,08
Trim41Q5NCC3 Gm24297-201ENSMUST00000158300 68 ntBASIC2,07□□□□□ -2,08
Trim41Q5NCC3 Gm25248-201ENSMUST00000175473 98 ntBASIC2,07□□□□□ -2,08
Trim41Q5NCC3 Gm44483-201ENSMUST00000197203 97 ntBASIC2,05□□□□□ -2,08
Trim41Q5NCC3 Gm22302-201ENSMUST00000082657 106 ntBASIC2,03□□□□□ -2,08
Trim41Q5NCC3 Gm25128-201ENSMUST00000083339 76 ntBASIC2,03□□□□□ -2,08
Trim41Q5NCC3 Gm25522-201ENSMUST00000158394 105 ntBASIC2,01□□□□□ -2,09
Trim41Q5NCC3 Mir6389-201ENSMUST00000183661 102 ntBASIC2,01□□□□□ -2,09
Trim41Q5NCC3 Snord13-201ENSMUST00000157627 104 ntBASIC2□□□□□ -2,09
Trim41Q5NCC3 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1,99□□□□□ -2,09
Trim41Q5NCC3 Gm22455-201ENSMUST00000082580 71 ntBASIC1,99□□□□□ -2,09
Trim41Q5NCC3 Gm22074-201ENSMUST00000158595 113 ntBASIC1,98□□□□□ -2,09
Trim41Q5NCC3 Gm22303-201ENSMUST00000082686 122 ntBASIC1,98□□□□□ -2,09
Trim41Q5NCC3 Gm24865-201ENSMUST00000103246 96 ntBASIC1,97□□□□□ -2,09
Trim41Q5NCC3 Gm25275-201ENSMUST00000104297 129 ntBASIC1,97□□□□□ -2,09
Trim41Q5NCC3 Gm24793-201ENSMUST00000104289 132 ntBASIC1,96□□□□□ -2,1
Trim41Q5NCC3 Gm23531-201ENSMUST00000104567 68 ntBASIC1,96□□□□□ -2,1
Trim41Q5NCC3 Mir3473d-201ENSMUST00000175346 81 ntBASIC1,96□□□□□ -2,1
Trim41Q5NCC3 Gm22980-201ENSMUST00000082608 70 ntBASIC1,96□□□□□ -2,1
Trim41Q5NCC3 Gm23787-201ENSMUST00000122538 73 ntBASIC1,95□□□□□ -2,1
Trim41Q5NCC3 Gm22088-201ENSMUST00000158341 117 ntBASIC1,95□□□□□ -2,1
Trim41Q5NCC3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1,95□□□□□ -2,1
Trim41Q5NCC3 Gm22485-201ENSMUST00000157990 109 ntBASIC1,94□□□□□ -2,1
Trim41Q5NCC3 Mir1955-201ENSMUST00000158014 98 ntBASIC1,94□□□□□ -2,1
Trim41Q5NCC3 DQ267101-201ENSMUST00000082562 73 ntBASIC1,93□□□□□ -2,1
Trim41Q5NCC3 Gm26363-201ENSMUST00000158866 83 ntBASIC1,92□□□□□ -2,1
Trim41Q5NCC3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1,92□□□□□ -2,1
Trim41Q5NCC3 Gm25779-201ENSMUST00000116710 95 ntBASIC1,91□□□□□ -2,1
Trim41Q5NCC3 Mir200a-201ENSMUST00000083466 90 ntBASIC1,91□□□□□ -2,1
Trim41Q5NCC3 Gm24047-201ENSMUST00000102405 104 ntBASIC1,89□□□□□ -2,11
Trim41Q5NCC3 Mir6381-201ENSMUST00000183426 87 ntBASIC1,88□□□□□ -2,11
Trim41Q5NCC3 Gm25132-201ENSMUST00000082652 107 ntBASIC1,87□□□□□ -2,11
Trim41Q5NCC3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1,87□□□□□ -2,11
Trim41Q5NCC3 Mir3105-201ENSMUST00000175480 85 ntBASIC1,83□□□□□ -2,12
Trim41Q5NCC3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1,82□□□□□ -2,12
Trim41Q5NCC3 Mir6364-201ENSMUST00000183396 86 ntBASIC1,82□□□□□ -2,12
Trim41Q5NCC3 Mir7229-201ENSMUST00000197062 53 ntBASIC1,82□□□□□ -2,12
Trim41Q5NCC3 Gm22879-201ENSMUST00000082895 74 ntBASIC1,82□□□□□ -2,12
Trim41Q5NCC3 Gm44345-201ENSMUST00000199560 135 ntBASIC1,81□□□□□ -2,12
Trim41Q5NCC3 Gm23173-201ENSMUST00000157161 160 ntBASIC1,8□□□□□ -2,12
Trim41Q5NCC3 Mir22-201ENSMUST00000083595 95 ntBASIC1,8□□□□□ -2,12
Trim41Q5NCC3 Snord67-201ENSMUST00000104033 111 ntBASIC1,79□□□□□ -2,12
Trim41Q5NCC3 Gm27711-201ENSMUST00000183802 118 ntBASIC1,79□□□□□ -2,12
Trim41Q5NCC3 Snord32a-201ENSMUST00000083285 83 ntBASIC1,79□□□□□ -2,12
Trim41Q5NCC3 Gm24278-201ENSMUST00000104239 127 ntBASIC1,78□□□□□ -2,12
Trim41Q5NCC3 Gm22301-201ENSMUST00000082656 107 ntBASIC1,78□□□□□ -2,12
Trim41Q5NCC3 Mir33-201ENSMUST00000083531 69 ntBASIC1,78□□□□□ -2,12
Trim41Q5NCC3 Gm24459-201ENSMUST00000082730 86 ntBASIC1,77□□□□□ -2,13
Trim41Q5NCC3 Gm23245-201ENSMUST00000083370 135 ntBASIC1,77□□□□□ -2,13
Trim41Q5NCC3 Gm23483-201ENSMUST00000104179 108 ntBASIC1,76□□□□□ -2,13
Trim41Q5NCC3 Mir1904-201ENSMUST00000122702 80 ntBASIC1,76□□□□□ -2,13
Trim41Q5NCC3 Gm22559-201ENSMUST00000157329 134 ntBASIC1,76□□□□□ -2,13
Trim41Q5NCC3 Gm22757-201ENSMUST00000102279 96 ntBASIC1,75□□□□□ -2,13
Trim41Q5NCC3 Gm24323-201ENSMUST00000175342 77 ntBASIC1,73□□□□□ -2,13
Trim41Q5NCC3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1,73□□□□□ -2,13
Trim41Q5NCC3 Mir363-201ENSMUST00000093598 75 ntBASIC1,73□□□□□ -2,13
Trim41Q5NCC3 Gm45688-201ENSMUST00000210002 101 ntBASIC1,72□□□□□ -2,13
Trim41Q5NCC3 Gm22550-201ENSMUST00000179774 107 ntBASIC1,71□□□□□ -2,14
Trim41Q5NCC3 AC161271.1-201ENSMUST00000226914 150 ntBASIC1,71□□□□□ -2,14
Trim41Q5NCC3 Gm22060-201ENSMUST00000082558 107 ntBASIC1,71□□□□□ -2,14
Trim41Q5NCC3 Gm24651-201ENSMUST00000157107 107 ntBASIC1,7□□□□□ -2,14
Trim41Q5NCC3 Gm22489-201ENSMUST00000116813 62 ntBASIC1,69□□□□□ -2,14
Trim41Q5NCC3 Gm26484-201ENSMUST00000158018 106 ntBASIC1,69□□□□□ -2,14
Trim41Q5NCC3 Gm24678-201ENSMUST00000158756 104 ntBASIC1,69□□□□□ -2,14
Trim41Q5NCC3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC1,68□□□□□ -2,14
Trim41Q5NCC3 Gm26285-201ENSMUST00000177923 107 ntBASIC1,68□□□□□ -2,14
Trim41Q5NCC3 Mir7091-201ENSMUST00000184075 79 ntBASIC1,68□□□□□ -2,14
Trim41Q5NCC3 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1,68□□□□□ -2,14
Trim41Q5NCC3 Gm23622-201ENSMUST00000082460 107 ntBASIC1,68□□□□□ -2,14
Trim41Q5NCC3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,66□□□□□ -2,14
Trim41Q5NCC3 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC1,64□□□□□ -2,15
Trim41Q5NCC3 Gm23749-201ENSMUST00000104223 131 ntBASIC1,64□□□□□ -2,15
Trim41Q5NCC3 Mir695-201ENSMUST00000102261 109 ntBASIC1,63□□□□□ -2,15
Trim41Q5NCC3 Gm22593-201ENSMUST00000104245 109 ntBASIC1,63□□□□□ -2,15
Trim41Q5NCC3 Gm24884-201ENSMUST00000158784 119 ntBASIC1,63□□□□□ -2,15
Trim41Q5NCC3 Mir6896-201ENSMUST00000198033 73 ntBASIC1,63□□□□□ -2,15
Trim41Q5NCC3 Gm24258-201ENSMUST00000083739 133 ntBASIC1,63□□□□□ -2,15
Trim41Q5NCC3 Gm23335-201ENSMUST00000117021 90 ntBASIC1,62□□□□□ -2,15
Trim41Q5NCC3 Gm24777-201ENSMUST00000157644 107 ntBASIC1,62□□□□□ -2,15
Trim41Q5NCC3 Gm27798-201ENSMUST00000184989 71 ntBASIC1,62□□□□□ -2,15
Trim41Q5NCC3 Snord35a-201ENSMUST00000083884 90 ntBASIC1,62□□□□□ -2,15
Trim41Q5NCC3 Gm44457-201ENSMUST00000198109 76 ntBASIC1,61□□□□□ -2,15
Trim41Q5NCC3 Mir142b-201ENSMUST00000083486 115 ntBASIC1,61□□□□□ -2,15
Trim41Q5NCC3 Gm22260-201ENSMUST00000178643 107 ntBASIC1,6□□□□□ -2,15
Trim41Q5NCC3 Mir6380-201ENSMUST00000184334 81 ntBASIC1,6□□□□□ -2,15
Trim41Q5NCC3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC1,58□□□□□ -2,16
Trim41Q5NCC3 Gm25772-201ENSMUST00000158574 56 ntBASIC1,57□□□□□ -2,16
Trim41Q5NCC3 Gm27289-201ENSMUST00000183341 82 ntBASIC1,57□□□□□ -2,16
Trim41Q5NCC3 Mir670-201ENSMUST00000102380 100 ntBASIC1,55□□□□□ -2,16
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms